Welcome to Benchling!

You're looking at a DNA Sequence. Here are some things you can do with it:

Create an alignment

  1. Create alignments with both DNA and AA sequences.
  2. Bulk-align multiple sequences at once.
  3. Powerful visualization tool to inspect alignments in detail.

Design a primer

Create a translation

Design a CRISPR guide

Assemble and transform a sequence

Benchling is actively tested against the latest versions of Chrome, Firefox, Safari, and Edge. **It doesn't look like your current browser is supported** - for more information, [click here](/browsers).
Monospace normal
Monospace bold
working...
Advanced Settings
pAAV_EF1a FLEX-HA-hM4D(Gi)-mCherry
  • Sequence Map
Editing disabled on read-only sequence.
cctgcaggcagctgcgcgctcgctcgctcactgaggccgcccgggcaaagcccgggcgtcgggcgacctttggtcgcccggcctcagtgagcgagcgagcgcgcagagagggagtggccaactccatcactaggggttcctgcggccgcacgcgtaagctttgcaaagatggataggacgtccgtcgacgcgcgagcgagcgagtgactccggcgggcccgtttcgggcccgcagcccgctggaaaccagcgggccggagtcactcgctcgctcgcgcgtctctccctcaccggttgaggtagtgatccccaaggacgccggcgtgcgcattcgaaacgtttctacctatEagIMluINotIHindIIIL-ITREF-1a20406080100120140160
aagttttaaacagagaggaatctttgcagctaatggaccttctaggtcttgaaaggagtgggaattggctccggtgcccgtcagtgggcagagcgcacatcgcccacagtccccgagaagttggggggaggggtcggcaattgaaccggtgcctagagaaggtggcgcggggtaattcaaaatttgtctctccttagaaacgtcgattacctggaagatccagaactttcctcacccttaaccgaggccacgggcagtcacccgtctcgcgtgtagcgggtgtcaggggctcttcaacccccctccccagccgttaacttggccacggatctcttccaccgcgccccattAgeIMfeIEcoNIEF-1a180200220240260280300320340
actgggaaagtgatgtcgtgtactggctccgcctttttcccgagggtgggggagaaccgtatataagtgcagtagtcgccgtgaacgttctttttcgcaacgggtttgccgccagaacacaggtaagtgccgtgtgtggttcccgcgggcctggcctctttacgggttatggccctgaccctttcactacagcacatgaccgaggcggaaaaagggctcccaccccctcttggcatatattcacgtcatcagcggcacttgcaagaaaaagcgttgcccaaacggcggtcttgtgtccattcacggcacacaccaagggcgcccggaccggagaaatgcccaataccgggEF-1a360380400420440460480500520
ttgcgtgccttgaattacttccactggctgcagtacgtgattcttgatcccgagcttcgggttggaagtgggtgggagagttcgaggccttgcgcttaaggagccccttcgcctcgtgcttgagttgaggcctggcctgggcgctggggccgccgcgtgcgaatctggtggcaccaacgcacggaacttaatgaaggtgaccgacgtcatgcactaagaactagggctcgaagcccaaccttcacccaccctctcaagctccggaacgcgaattcctcggggaagcggagcacgaactcaactccggaccggacccgcgaccccggcggcgcacgcttagaccaccgtggAflIIEF-1a540560580600620640660680700
ttcgcgcctgtctcgctgctttcgataagtctctagccatttaaaatttttgatgacctgctgcgacgctttttttctggcaagatagtcttgtaaatgcgggccaagatctgcacactggtatttcggtttttggggccgcgggcggcgacggggcccgtgcgtcccagcgcacaagcgcggacagagcgacgaaagctattcagagatcggtaaattttaaaaactactggacgacgctgcgaaaaaaagaccgttctatcagaacatttacgcccggttctagacgtgtgaccataaagccaaaaaccccggcgcccgccgctgccccgggcacgcagggtcgcgtgPciIBglIIEF-1a720740760780800820840860
atgttcggcgaggcggggcctgcgagcgcggccaccgagaatcggacgggggtagtctcaagctggccggcctgctctggtgcctggcctcgcgccgccgtgtatcgccccgccctgggcggcaaggctggcccggtcggcaccagttgcgtgagcggaaagatggccgcttccctacaagccgctccgccccggacgctcgcgccggtggctcttagcctgcccccatcagagttcgaccggccggacgagaccacggaccggagcgcggcggcacatagcggggcgggacccgccgttccgaccgggccagccgtggtcaacgcactcgcctttctaccggcgaagggFseIPasIBstAPIEF-1a8809009209409609801,0001,0201,040
ggccctgctgcagggagctcaaaatggaggacgcggcgctcgggagagcgggcgggtgagtcacccacacaaaggaaaagggcctttccgtcctcagccgtcgcttcatgtgactccacggagtaccgggcgccgtccaggcacctcgattagttctcgagcttttggagtacgtccgggacgacgtccctcgagttttacctcctgcgccgcgagccctctcgcccgcccactcagtgggtgtgtttccttttcccggaaaggcaggagtcggcagcgaagtacactgaggtgcctcatggcccgcggcaggtccgtggagctaatcaagagctcgaaaacctcatgcaSacITliIXhoIEcoNIPaeR7IEco53kIEF-1a1,0601,0801,1001,1201,1401,1601,1801,2001,220
cgtctttaggttggggggaggggttttatgcgatggagtttccccacactgagtgggtggagactgaagttaggccagcttggcacttgatgtaattctccttggaatttgccctttttgagtttggatcttggttcattctcaagcctcagacagtggttcaaagtttttttctgcagaaatccaacccccctccccaaaatacgctacctcaaaggggtgtgactcacccacctctgacttcaatccggtcgaaccgtgaactacattaagaggaaccttaaacgggaaaaactcaaacctagaaccaagtaagagttcggagtctgtcaccaagtttcaaaaaaagaEF-1a1,2401,2601,2801,3001,3201,3401,3601,3801,400
tccatttcaggtgtcgtgaggtaccggatcctctagagtcgactccggaataacttcgtataggatactttatacgaagttatgcagaatggtagctggattgtagctgctattagcaatatgaaacctcttaataacttcgtatagcatacattatacgaagttatggcgcgccaggtaaagtccacagcactccatggcctaggagatctcagctgaggccttattgaagcatatcctatgaaatatgcttcaatacgtcttaccatcgacctaacatcgacgataatcgttatactttggagaattattgaagcatatcgtatgtaatatgcttcaataccgcgcggAccIAscIKpnISalIXbaIBamHIBspEIAcc65ILox2722LoxPEF-1a1,4201,4401,4601,4801,5001,5201,5401,560
ttacttgtacagctcgtccatgccgccggtggagtggcggccctcggcgcgttcgtactgttccacgatggtgtagtcctcgttgtgggaggtgatgtccaacttgatgttgacgttgtaggcgccgggcagctgcacgggcttcttggccttgtaggtggtcttgacctcagcgaatgaacatgtcgagcaggtacggcggccacctcaccgccgggagccgcgcaagcatgacaaggtgctaccacatcaggagcaacaccctccactacaggttgaactacaactgcaacatccgcggcccgtcgacgtgcccgaagaaccggaacatccaccagaactggagtcgcXcmISgrAImCherry1,5801,6001,6201,6401,6601,6801,7001,7201,740
tcgtagtggccgccgtccttcagcttcagcctctgcttgatctcgcccttcagggcgccgtcctcggggtacatccgctcggaggaggcctcccagcccatggtcttcttctgcattacggggccgtcggaggggaagttggtgccgcgcagcttcaccttgtagatgaactcgcagcatcaccggcggcaggaagtcgaagtcggagacgaactagagcgggaagtcccgcggcaggagccccatgtaggcgagcctcctccggagggtcgggtaccagaagaagacgtaatgccccggcagcctccccttcaaccacggcgcgtcgaagtggaacatctacttgagcgPflMImCherry1,7601,7801,8001,8201,8401,8601,8801,9001,920
cgtcctgcagggaggagtcctgggtcacggtcaccacgccgccgtcctcgaagttcatcacgcgctcccacttgaagccctcggggaaggacagcttcaagtagtcggggatgtcggcggggtgcttcacgtaggccttggagccgtacatgaactgaggggacaggatgtcccagcaggacgtccctcctcaggacccagtgccagtggtgcggcggcaggagcttcaagtagtgcgcgagggtgaacttcgggagccccttcctgtcgaagttcatcagcccctacagccgccccacgaagtgcatccggaacctcggcatgtacttgactcccctgtcctacagggtmCherry1,9401,9601,9802,0002,0202,0402,0602,0802,100
ggcgaagggcagggggccacccttggtcaccttcagcttggcggtctgggtgccctcgtaggggcggccctcgccctcgccctcgatctcgaactcgtggccgttcacggagccctccatgtgcaccttgaagcgcatgaactccttgatgatggccatgttatcctcctcgcccccgcttcccgtcccccggtgggaaccagtggaagtcgaaccgccagacccacgggagcatccccgccgggagcgggagcgggagctagagcttgagcaccggcaagtgcctcgggaggtacacgtggaacttcgcgtacttgaggaactactaccggtacaataggaggagcgggmCherry2,1202,1402,1602,1802,2002,2202,2402,260
ttgctcaccatggtggcgaccggtggatcccgcctggcagtgccgatgttccgatactggcacagcagcaggtgccggaaggtctttttaaaggtggcgttgcacagagcatagcaggcagggttgatggtgctgttgacgtagcagagccagtagccaatggaccacaccgtgtaacgagtggtaccaccgctggccacctagggcggaccgtcacggctacaaggctatgaccgtgtcgtcgtccacggccttccagaaaaatttccaccgcaacgtgtctcgtatcgtccgtcccaactaccacgacaactgcatcgtctcggtcatcggttacctggtgtggcacaAgeIBamHIPaqCIBstAPIhM4DmCherry2,2802,3002,3202,3402,3602,3802,4002,4202,440
cagggatgcagctctggcagaaggtgttcaccaggaccatgacgttgtagggcgtccaggtgaggatgaaggccagcagaatggcaaagatcgttcgtgtcactttgcgctcccgggccgccatctgccgcttcttgcgcacctggttgcgagcgatgctggcgaacttgcgggcgtccctacgtcgagaccgtcttccacaagtggtcctggtactgcaacatcccgcaggtccactcctacttccggtcgtcttaccgtttctagcaagcacagtgaaacgcgagggcccggcggtagacggcgaagaacgcgtggaccaacgctcgctacgaccgcttgaacgcccgSexAIhM4D2,4602,4802,5002,5202,5402,5602,5802,6002,620
cacgttggccgcagggcgcatgccagccggcgtggcaggcacaatctcaatggctgtcacacactcattgcctgtctgcttcgtcacaatctggatcttggaccatctggaggctgggttgagggcccgcggctgcaggggaggggcgggcatggcgggcgtggtggcctctgtggtgcaaccggcgtcccgcgtacggtcggccgcaccgtccgtgttagagttaccgacagtgtgtgagtaacggacagacgaagcagtgttagacctagaacctggtagacctccgacccaactcccgggcgccgacgtcccctccccgcccgtaccgcccgcaccaccggagacacSfiISphIXcmIhM4D2,6402,6602,6802,7002,7202,7402,7602,7802,800
gtggacagctctgtggctgggcgttccttggtgttctgggtggcactgcctgagctggactcattggaagtgtccttatcagccacggggcgcggtggcggtggcagcgctggcgggggggcctcctccagcttgccattgcgcagctcctcccgggcggcctccccgggcggggcacctgtcgagacaccgacccgcaaggaaccacaagacccaccgtgacggactcgacctgagtaaccttcacaggaatagtcggtgccccgcgccaccgccaccgtcgcgaccgcccccccggaggaggtcgaacggtaacgcgtcgaggagggcccgccggaggggcccgccccAfeIhM4D2,8202,8402,8602,8802,9002,9202,9402,960
gcttcttgacgctctgcttcattagtgggctcttgaggaaggccagcgtcttggctttcttctccttcgggccctcgggccggtgcttgtggactcggctgcgactggccagggagatgtggatgtacagcaccgtcatgatgaccacaggcaggtagaagccagcaatggctgtcgaagaactgcgagacgaagtaatcacccgagaactccttccggtcgcagaaccgaaagaagaggaagcccgggagcccggccacgaacacctgagccgacgctgaccggtccctctacacctacatgtcgtggcagtactactggtgtccgtccatcttcggtcgttaccgacahM4D2,9803,0003,0203,0403,0603,0803,1003,1203,140
gccaaaggtcactgctgggttggacaggaactggatgaagcactggttgtcgggcaccgtccgcttacccaccacaaactgccagaacaagatggcaggcgcccagagcacgaaggacagtacccaggcagcagcaatcatgaggcctgccatcttggtggtgcgccgggcagggcggtttccagtgacgacccaacctgtccttgacctacttcgtgaccaacagcccgtggcaggcgaatgggtggtgtttgacggtcttgttctaccgtccgcgggtctcgtgcttcctgtcatgggtccgtcgtcgttagtactccggacggtagaaccaccacgcggcccgtccchM4D3,1603,1803,2003,2203,2403,2603,2803,3003,320
taggtgagaggcttggtgacgcagaagtagcggtcaaagctgatgatgagaaggttcatgacggaggcgttgctcaccacgcagtccagggccagccacaggtcgcagaccacggcgcccaggggccagtagcccttgatgatgtacacggtgtagaggttcatggagaaggcgcatccactctccgaaccactgcgtcttcatcgccagtttcgactactactcttccaagtactgcctccgcaacgagtggtgcgtcaggtcccggtcggtgtccagcgtctggtgccgcgggtccccggtcatcgggaactactacatgtgccacatctccaagtacctcttccgcgPasIhM4D3,3403,3603,3803,4003,4203,4403,4603,4803,500
ctatgatgagatcagcacacgccaggctgaagaggaagtagttgttgactgtctgcagctgcctgttgaccttgatggacagcatcaccaggatgttgcccacgacagtcaccaggctcagggagcctgtcactgtggcaatgaagaccatttccaccgtctcatagcgattgtggatactactctagtcgtgtgcggtccgacttctccttcatcaacaactgacagacgtcgacggacaactggaactacctgtcgtagtggtcctacaacgggtgctgtcagtggtccgagtccctcggacagtgacaccgttacttctggtaaaggtggcagagtatcgctaacachM4D3,5203,5403,5603,5803,6003,6203,6403,660
ggatgatgacgtgaccaggcgcacggactgattgcccgagctgccattgacaggtgtgaagttggccatggtggcgctagcataacttcgtataaagtatcctatacgaagttatttgccttaacccagaaattatcactgttattctttagaatggtgcaaagaataacttcgtcctactactgcactggtccgcgtgcctgactaacgggctcgacggtaactgtccacacttcaaccggtaccaccgcgatcgtattgaagcatatttcataggatatgcttcaataaacggaattgggtctttaatagtgacaataagaaatcttaccacgtttcttattgaagcaBmtINheIBmgBIhM4DLox2722LoxP3,6803,7003,7203,7403,7603,7803,8003,8203,840
ataatgtatgctatacgaagttatgaattcgatatcaagcttatcgataatcaacctctggattacaaaatttgtgaaagattgactggtattcttaactatgttgctccttttacgctatgtggatacgctgctttaatgcctttgtatcatgctattgcttcccgtatggctttattacatacgatatgcttcaatacttaagctatagttcgaatagctattagttggagacctaatgttttaaacactttctaactgaccataagaattgatacaacgaggaaaatgcgatacacctatgcgacgaaattacggaaacatagtacgataacgaagggcataccgaaClaIBspDIEcoRIEcoRVHindIIIWPRELoxP3,8603,8803,9003,9203,9403,9603,9804,0004,020
tcattttctcctccttgtataaatcctggttgctgtctctttatgaggagttgtggcccgttgtcaggcaacgtggcgtggtgtgcactgtgtttgctgacgcaacccccactggttggggcattgccaccacctgtcagctcctttccgggactttcgctttccccctccctatagtaaaagaggaggaacatatttaggaccaacgacagagaaatactcctcaacaccgggcaacagtccgttgcaccgcaccacacgtgacacaaacgactgcgttgggggtgaccaaccccgtaacggtggtggacagtcgaggaaaggccctgaaagcgaaagggggagggataPfoIPflMIWPRE4,0404,0604,0804,1004,1204,1404,1604,1804,200
tgccacggcggaactcatcgccgcctgccttgcccgctgctggacaggggctcggctgttgggcactgacaattccgtggtgttgtcggggaaatcatcgtcctttccttggctgctcgcctatgttgccacctggattctgcgcgggacgtccttctgctacgtcccttcggccacggtgccgccttgagtagcggcggacggaacgggcgacgacctgtccccgagccgacaacccgtgactgttaaggcaccacaacagcccctttagtagcaggaaaggaaccgacgagcggatacaacggtggacctaagacgcgccctgcaggaagacgatgcagggaagccggZraIAatIIWPRE4,2204,2404,2604,2804,3004,3204,3404,360
ctcaatccagcggaccttccttcccgcggcctgctgccggctctgcggcctcttccgcgtcttcgccttcgccctcagacgagtcggatctccctttgggccgcctccccgcatcgataccgagcgctgctcgagagatctacgggtggcatccctgtgacccctccccagtgccgagttaggtcgcctggaaggaagggcgccggacgacggccgagacgccggagaaggcgcagaagcggaagcgggagtctgctcagcctagagggaaacccggcggaggggcgtagctatggctcgcgacgagctctctagatgcccaccgtagggacactggggaggggtcacggAfeIClaITliIXhoIBglIIBspDIPaeR7IWPREhGH polyA4,3804,4004,4204,4404,4604,4804,5004,5204,540
tctcctggccctggaagttgccactccagtgcccaccagccttgtcctaataaaattaagttgcatcattttgtctgactaggtgtccttctataatattatggggtggaggggggtggtatggagcaaggggcaagttgggaagacaacctgtagggcctgcggggtctattggagaggaccgggaccttcaacggtgaggtcacgggtggtcggaacaggattattttaattcaacgtagtaaaacagactgatccacaggaagatattataataccccacctccccccaccatacctcgttccccgttcaacccttctgttggacatcccggacgccccagataaccCspCIhGH polyA4,5604,5804,6004,6204,6404,6604,6804,7004,720
gaaccaagctggagtgcagtggcacaatcttggctcactgcaatctccgcctcctgggttcaagcgattctcctgcctcagcctcccgagttgttgggattccaggcatgcatgaccaggctcagctaatttttgtttttttggtagagacggggtttcaccatattggccaggccttggttcgacctcacgtcaccgtgttagaaccgagtgacgttagaggcggaggacccaagttcgctaagaggacggagtcggagggctcaacaaccctaaggtccgtacgtactggtccgagtcgattaaaaacaaaaaaaccatctctgccccaaagtggtataaccggtccgBcgIBlpINsiISphIhGH polyA4,7404,7604,7804,8004,8204,8404,8604,8804,900
tggtctccaactcctaatctcaggtgatctacccaccttggcctcccaaattgctgggattacaggcgtgaaccactgctcccttccctgtccttctgattttgtaggtaaccacgtgcggaccgagcggccgcaggaacccctagtgatggagttggccactccctctctgcgcaccagaggttgaggattagagtccactagatgggtggaaccggagggtttaacgaccctaatgtccgcacttggtgacgagggaagggacaggaagactaaaacatccattggtgcacgcctggctcgccggcgtccttggggatcactacctcaaccggtgagggagagacgcgBsaIEagINotIPmlIRsrIIhGH polyAR-ITR4,9204,9404,9604,9805,0005,0205,0405,060
gctcgctcgctcactgaggccgggcgaccaaaggtcgcccgacgcccgggctttgcccgggcggcctcagtgagcgagcgagcgcgcagctgcctgcaggggcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatacgtcaaagcaaccatagtacgagcgagcgagtgactccggcccgctggtttccagcgggctgcgggcccgaaacgggcccgccggagtcactcgctcgctcgcgcgtcgacggacgtccccgcggactacgccataaaagaggaatgcgtagacacgccataaagtgtggcgtatgcagtttcgttggtatcatR-ITR5,0805,1005,1205,1405,1605,1805,2005,2205,240
cgcgccctgtagcggcgcattaagcgcggcgggtgtggtggttacgcgcagcgtgaccgctacacttgccagcgccctagcgcccgctcctttcgctttcttcccttcctttctcgccacgttcgccggctttccccgtcaagctctaaatcgggggctccctttagggttccgagcgcgggacatcgccgcgtaattcgcgccgcccacaccaccaatgcgcgtcgcactggcgatgtgaacggtcgcgggatcgcgggcgaggaaagcgaaagaagggaaggaaagagcggtgcaagcggccgaaaggggcagttcgagatttagcccccgagggaaatcccaaggctf1 Origin5,2605,2805,3005,3205,3405,3605,3805,4005,420
tttagtgctttacggcacctcgaccccaaaaaacttgatttgggtgatggttcacgtagtgggccatcgccctgatagacggtttttcgccctttgacgttggagtccacgttctttaatagtggactcttgttccaaactggaacaacactcaaccctatctcgggctattcttaaatcacgaaatgccgtggagctggggttttttgaactaaacccactaccaagtgcatcacccggtagcgggactatctgccaaaaagcgggaaactgcaacctcaggtgcaagaaattatcacctgagaacaaggtttgaccttgttgtgagttgggatagagcccgataagaaf1 Origin5,4405,4605,4805,5005,5205,5405,5605,5805,600
ttgatttataagggattttgccgatttcggcctattggttaaaaaatgagctgatttaacaaaaatttaacgcgaattttaacaaaatattaacgtttacaattttatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacaccaactaaatattccctaaaacggctaaagccggataaccaattttttactcgactaaattgtttttaaattgcgcttaaaattgttttataattgcaaatgttaaaataccacgtgagagtcatgttagacgagactacggcgtatcaattcggtcggggctgtgggcggttgtggPsiI5,6205,6405,6605,6805,7005,7205,7405,760
cgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcgcgagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatggttgcgactgcgcgggactgcccgaacagacgagggccgtaggcgaatgtctgttcgacactggcagaggccctcgacgtacacagtctccaaaagtggcagtagtggctttgcgcgctctgctttcccggagcactatgcggataaaaatatccaattacagtactattattaccaaPfoI5,7805,8005,8205,8405,8605,8805,9005,9205,940
tcttagacgtcaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatatgtatccgctcatgagacaataaccctgataaatgcttcaataatattgaaaaaggaagagtatgagtattcaacatttccgtgtcgcccttattcagaatctgcagtccaccgtgaaaagcccctttacacgcgccttggggataaacaaataaaaagatttatgtaagtttatacataggcgagtactctgttattgggactatttacgaagttattataactttttccttctcatactcataagttgtaaaggcacagcgggaataagZraIAatIIAmpR5,9605,9806,0006,0206,0406,0606,0806,1006,120
ccttttttgcggcattttgccttcctgtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgcacgagtgggttacatcgaactggatctcaacagcggtaagatccttgagagttttcgccccgaagaacgttttccaatgatgagcactttggaaaaaacgccgtaaaacggaaggacaaaaacgagtgggtctttgcgaccactttcattttctacgacttctagtcaacccacgtgctcacccaatgtagcttgacctagagttgtcgccattctaggaactctcaaaagcggggcttcttgcaaaaggttactactcgtgaaaAmpR6,1406,1606,1806,2006,2206,2406,2606,2806,300
taaagttctgctatgtggcgcggtattatcccgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgacttggttgagtactcaccagtcacagaaaagcatcttacggatggcatgacagtaagagaattatgcagtgctgccataaccatgagtatttcaagacgatacaccgcgccataatagggcataactgcggcccgttctcgttgagccagcggcgtatgtgataagagtcttactgaaccaactcatgagtggtcagtgtcttttcgtagaatgcctaccgtactgtcattctcttaatacgtcacgacggtattggtactcaBcgIScaIAmpR6,3206,3406,3606,3806,4006,4206,4406,460
gataacactgcggccaacttacttctgacaacgatcggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtaactcgccttgatcgttgggaaccggagctgaatgaagccataccaaacgacgagcgtgacaccacgatgcctgtagcaatggcaacaactattgtgacgccggttgaatgaagactgttgctagcctcctggcttcctcgattggcgaaaaaacgtgttgtaccccctagtacattgagcggaactagcaacccttggcctcgacttacttcggtatggtttgctgctcgcactgtggtgctacggacatcgttaccgttgttPvuIAmpR6,4806,5006,5206,5406,5606,5806,6006,6206,640
cgttgcgcaaactattaactggcgaactacttactctagcttcccggcaacaattaatagactggatggaggcggataaagttgcaggaccacttctgcgctcggcccttccggctggctggtttattgctgataaatctggagccggtgagcgtgggtctcgcggtatcattgcgcaacgcgtttgataattgaccgcttgatgaatgagatcgaagggccgttgttaattatctgacctacctccgcctatttcaacgtcctggtgaagacgcgagccgggaaggccgaccgaccaaataacgactatttagacctcggccactcgcacccagagcgccatagtaacgAseIBsaIAmpR6,6606,6806,7006,7206,7406,7606,7806,8006,820
agcactggggccagatggtaagccctcccgtatcgtagttatctacacgacggggagtcaggcaactatggatgaacgaaatagacagatcgctgagataggtgcctcactgattaagcattggtaactgtcagaccaagtttactcatatatactttagattgatttaaaactttcgtgaccccggtctaccattcgggagggcatagcatcaatagatgtgctgcccctcagtccgttgatacctacttgctttatctgtctagcgactctatccacggagtgactaattcgtaaccattgacagtctggttcaaatgagtatatatgaaatctaactaaattttgaaAmpR6,8406,8606,8806,9006,9206,9406,9606,9807,000
catttttaatttaaaaggatctaggtgaagatcctttttgataatctcatgaccaaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaagatcaaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaaaaaccacgtaaaaattaaattttcctagatccacttctaggaaaaactattagagtactggttttagggaattgcactcaaaagcaaggtgactcgcagtctggggcatcttttctagtttcctagaagaactctaggaaaaaaagacgcgcattagacgacgaacgtttgtttttttggtgpUC ori7,0207,0407,0607,0807,1007,1207,1407,160
cgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgtagttaggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctgttgcgatggtcgccaccaaacaaacggcctagttctcgatggttgagaaaaaggcttccattgaccgaagtcgtctcgcgtctatggtttatgacaggaagatcacatcggcatcaatccggtggtgaagttcttgagacatcgtggcggatgtatggagcgagacgattaggacaapUC ori7,1807,2007,2207,2407,2607,2807,3007,3207,340
accagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagcccagcttggagcgaacgacctacaccgaactgagatacctacagcgtgagctatgagaaagctggtcaccgacgacggtcaccgctattcagcacagaatggcccaacctgagttctgctatcaatggcctattccgcgtcgccagcccgacttgccccccaagcacgtgtgtcgggtcgaacctcgcttgctggatgtggcttgactctatggatgtcgcactcgatactctttcgpUC ori7,3607,3807,4007,4207,4407,4607,4807,5007,520
gccacgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggagagcgcacgagggagcttccagggggaaacgcctggtatctttatagtcctgtcgggtttcgccacctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggacggtgcgaagggcttccctctttccgcctgtccataggccattcgccgtcccagccttgtcctctcgcgtgctccctcgaaggtccccctttgcggaccatagaaatatcaggacagcccaaagcggtggagactgaactcgcagctaaaaacactacgagcagtccccccgcctpUC ori7,5407,5607,5807,6007,6207,6407,6607,6807,700
gcctatggaaaaacgccagcaacgcggcctttttacggttcctggccttttgctggccttttgctcacatgtcggatacctttttgcggtcgttgcgccggaaaaatgccaaggaccggaaaacgaccggaaaacgagtgtacaPciIpUC ori7,7207,7407,760
  • Plasmid
Editing disabled on read-only sequence.
7772 bp5500600065007000750050010001500mCherry

Welcome to Benchling!

Sign in to view data.

New digest

Saved digests

Enzyme AatII
Enzyme lists
Cut sites visible on maps
Find enzyme
Name Cuts
Selected Color
Show enzymes that cut

Primers

History

Lineage

 Show Full History
Change User Timestamp

Sequence Alignments

Saved Alignments

Sequence Info

Tags

Name
Parent Version
Folder
Topology
Start Index
Locked
Created
--
Length
--
Export Data
Split Workspace
Bases
7772