Welcome to Benchling!

You're looking at a DNA Sequence. Here are some things you can do with it:

Create an alignment

  1. Create alignments with both DNA and AA sequences.
  2. Bulk-align multiple sequences at once.
  3. Powerful visualization tool to inspect alignments in detail.

Design a primer

Create a translation

Design a CRISPR guide

Assemble and transform a sequence

Create account

Sign up with GoogleI already have an account
Benchling is actively tested against the latest versions of Chrome, Firefox, Safari, and Edge. **It doesn't look like your current browser is supported** - for more information, [click here](/browsers).
Monospace normal
Monospace bold
Advanced Settings
  • 0 feature results
gapped_3aa_SXJ_C
  • Sequence Map
    Editing disabled on read-only sequence.
    GACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGATAATAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTCTGCTTTCCCGGAGCACTATGCGGATAAAAATATCCAATTACAGTACTATTATTACCAAAGAATCTGCAGTCCACCGTGAAAAGCCCCTTTACACGCGCCTTGGGGATAAACAAATAAAAAGATTTATGTAAGTTTATACATAGGCGAGTACTCTGTTATTGGGACTATTTACGAZraIAatIIBciVIBsaHIEcoO109IpUC19-fseq 20406080100120140160
    TCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGTTATTATAACTTTTTCCTTCTCATACTCATAAGTTGTAAAGGCACAGCGGGAATAAGGGAAAAAACGCCGTAAAACGGAAGGACAAAAACGAGTGGGTCTTTGCGACCACTTTCATTTTCTACGACTTCTAGTCAACCCACGTGCTCACCCAATGTAGCTTGACCTAGAGTTGbla genebla signal peptide180200220240260280300320340
    AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAATCGCCATTCTAGGAACTCTCAAAAGCGGGGCTTCTTGCAAAAGGTTACTACTCGTGAAAATTTCAAGACGATACACCGCGCCATAATAGGGCATAACTGCGGCCCGTTCTCGTTGAGCCAGCGGCGTATGTGATAAGAGTCTTACTGAACCAACTCATGAGTGGTCAGTGTCTTTBcgIScaIBsaHIbla geneBcgIXm...I360380400420440460480500520
    AGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTTCGTAGAATGCCTACCGTACTGTCATTCTCTTAATACGTCACGACGGTATTGGTACTCACTATTGTGACGCCGGTTGAATGAAGACTGTTGCTAGCCTCCTGGCTTCCTCGATTGGCGAAAAAACGTGTTGTACCCCCTAGTACATTGAGCGGAACTAGCAACCCTTGGCCTCGAPvuIAvaIIbla gene540560580600620640660680700
    GAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTCTTACTTCGGTATGGTTTGCTGCTCGCACTGTGGTGCTACGGACATCGTTACCGTTGTTGCAACGCGTTTGATAATTGACCGCTTGATGAATGAGATCGAAGGGCCGTTGTTAATTATCTGACCTACCTCCGCCTATTTCAACGTCCTGGTGAAGACGCGAGCCGGGAAGGCCGABglIFspIAvaIIBsrDINmeAIIIbla geneBglI720740760780800820840860
    GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGTTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTACCGACCAAATAACGACTATTTAGACCTCGGCCACTCGCACCAAGAGCGCCATAGTAACGTCGTGACCCCGGTCTACCATTCGGGAGGGCATAGCATCAATAGATGTGCTGCCCCTCAGTCCGTTGATACCTACTTGCTTTATCTGTCTAGCGACTCTATCCACGGAGTGACTAATAhdIBmrIBpmIBsrDIBsrFIbla genepUC-remBSA-F pUC-remBSA-R Ea...I8809009209409609801,0001,0201,040
    AGCATTGGTAACTGTCAGACCAAGTTTACTCATATATACTTTAGATTGATTTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGTCGTAACCATTGACAGTCTGGTTCAAATGAGTATATATGAAATCTAACTAAATTTTGAAGTAAAAATTAAATTTTCCTAGATCCACTTCTAGGAAAAACTATTAGAGTACTGGTTTTAGGGAATTGCACTCAAAAGCAAGGTGACTCGCAGTCTGGGGCATCTTTTCTAGTTTCCbl...e1,0601,0801,1001,1201,1401,1601,1801,2001,220
    ATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTTCTTCTAGTGTAGCCGTAGTTATAGAAGAACTCTAGGAAAAAAAGACGCGCATTAGACGACGAACGTTTGTTTTTTTGGTGGCGATGGTCGCCACCAAACAAACGGCCTAGTTCTCGATGGTTGAGAAAAAGGCTTCCATTGACCGAAGTCGTCTCGCGTCTATGGTTTATGACAAGAAGATCACATCGGCATCAATBceAIrep originRNAI transcript1,2401,2601,2801,3001,3201,3401,3601,3801,400
    GGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCACCGGTGGTGAAGTTCTTGAGACATCGTGGCGGATGTATGGAGCGAGACGATTAGGACAATGGTCACCGACGACGGTCACCGCTATTCAGCACAGAATGGCCCAACCTGAGTTCTGCTATCAATGGCCTATTCCGCGTCGCCAGCCCGACTTGCCCCCCAAGCACGTGTGTCGGGTAlwNIBseYIrep origin1,4201,4401,4601,4801,5001,5201,5401,560
    GCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGAACCTCGCTTGCTGGATGTGGCTTGACTCTATGGATGTCGCACTCGATACTCTTTCGCGGTGCGAAGGGCTTCCCTCTTTCCGCCTGTCCATAGGCCATTCGCCGTCCCAGCCTTGTCCTCTCGCGTGCTCCCTCGAAGGTCCCCCTTTGCGGACCATAGAAATATCAGGACABciVIHaeIIrep origin1,5801,6001,6201,6401,6601,6801,7001,7201,740
    CGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCCAAAGCGGTGGAGACTGAACTCGCAGCTAAAAACACTACGAGCAGTCCCCCCGCCTCGGATACCTTTTTGCGGTCGTTGCGCCGGAAAAATGCCAAGGACCGGAAAACGACCGGAAAACGAGTGTACAAGAAAGGACGCAATAGGGGACTAAGACACCTATTGGCATAATGGDrdINspIPciIrep originDrd...DI1,7601,7801,8001,8201,8401,8601,8801,9001,920
    GCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCACGGAAACTCACTCGACTATGGCGAGCGGCGTCGGCTTGCTGGCTCGCGTCGCTCAGTCACTCGCTCCTTCGCCTTCTCGCGGGTTATGCGTTTGGCGGAGAGGGGCGCGCAACCGGCTAAGTAATTACGTCGACCGTGCTGTCCAAAGGGCTGACCTTTCGCCCGTCACTCGCGTSapIBsaXIBspQIHaeIIBsaXI1,9401,9601,9802,0002,0202,0402,0602,0802,100
    ACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGATTACGCCCGCTTCATCCAATCTCGAGCATCTTTCATTGATGGAAATTTTGCGTTAATTACACTCAATCGAGTGAGTAATCCGTGGGGTCCGAAATGTGAAATACGAAGGCCGAGCATACAACACACCTTAACACTCGCCTATTGTTAAAGTGTGTCCTTTGTCGATACTGGTACTAATGCGGGCGAAGTAGGTTAGAGCTCGTAGAAAGTAACTACCTTTAAATliIXhoIPaeR7Iseq verifiedHom3-trunc-loc2 Extracted region from T4 genomehomologous arm 3pUC19-rseqCAP...nd2,1202,1402,1602,1802,2002,2202,2402,260
    TTGAGGAGCGCAGTTTTTACCATAGATGTCTTTGTATTTTGACTCTTCCTTACAATGCCTAAACATAGTTGGAAGATATTCTACTTCACGGGTACGTTCCTTTCCATTTTCATCAATATAACGTTCAACAATGTTATTTCCGACTGTTTCAATAGAGATATAAAATTCTTTCATAAACTCCTCGCGTCAAAAATGGTATCTACAGAAACATAAAACTGAGAAGGAATGTTACGGATTTGTATCAACCTTCTATAAGATGAAGTGCCCATGCAAGGAAAGGTAAAAGTAGTTATATTGCAAGTTGTTACAATAAAGGCTGACAAAGTTATCTCTATATTTTAAGAAAGTATBarIBseRIseq verifiedExtracted region from T4 genomehomologous arm 32,2802,3002,3202,3402,3602,3802,4002,4202,440
    GATATTCCTTAGTTTATAGCCCGAGTTATTAGGCTCTTGATATATTATACTCCAAATAAGGGGCCGAAGCCCCTTGCTTAATTACCAATCGTATATTTAGGAACGAGCTTCCATTCATGTTTTTGTTTAAAAGAAATAACTCGGAAGTTATTAGTTAAATCTTTCATAAAAGTTCCTATAAGGAATCAAATATCGGGCTCAATAATCCGAGAACTATATAATATGAGGTTTATTCCCCGGCTTCGGGGAACGAATTAATGGTTAGCATATAAATCCTTGCTCGAAGGTAAGTACAAAAACAAATTTTCTTTATTGAGCCTTCAATAATCAATTTAGAAAGTATTTTCAAGseq verifiedExtracted region from T4 genomehomologous arm 32,4602,4802,5002,5202,5402,5602,5802,6002,620
    TTTGACCAGGAACGATTTCAATTAGTCCCCAATCTTCTAATAGCCATGCAATCGAATCACGACGAACTTCATCTTCTTCTGTCATTTCAACTTGACGACCATCCATACGAAGCATTTCTTTAATGGGAAATGAACGATATAGTATAGTCCTTTTTTCTGAAGAATATGACAGGACAAACTGGTCCTTGCTAAAGTTAATCAGGGGTTAGAAGATTATCGGTACGTTAGCTTAGTGCTGCTTGAAGTAGAAGAAGACAGTAAAGTTGAACTGCTGGTAGGTATGCTTCGTAAAGAAATTACCCTTTACTTGCTATATCATATCAGGAAAAAAGACTTCTTATACTGTCCTGBsmFIseq verifiedExtracted region from T4 genomehomologous arm 3GAP-Trans-clmp-F H3-rev-GAP-clamp2,6402,6602,6802,7002,7202,7402,7602,7802,800
    TGATATAGAACTTTATCTTTATTATTAGCAATTCCCATACGAGTCAAAGTTTCTTTTACTTTCAGAAAATCTTCAGGTTTTTTAAGAGTAATTTCAATCATTTTACCATTCCAATGCTAGTTTTTTGAGTTGTTTCTGTTCTTTTACGTTCTTAGTCACTTCTTTCAAAAAATCAACTATATCTTGAAATAGAAATAATAATCGTTAAGGGTATGCTCAGTTTCAAAGAAAATGAAAGTCTTTTAGAAGTCCAAAAAATTCTCATTAAAGTTAGTAAAATGGTAAGGTTACGATCAAAAAACTCAACAAAGACAAGAAAATGCAAGAATCAGTGAAGAAAGTTTTTTAGTseq verifiedGP62gib.gp62.poolB.RMsq.2N.....B2.R Mseq.g...b.chkXm...I2,8202,8402,8602,8802,9002,9202,9402,960
    TCCGTGACTAAACCTTTTAGTTCTTTTAATACTAAAGGAAGTTTTCCATTTTTAGTAAGAATTGATTTATAGTTAATTGCATCATTTGTATTAACTTGATACCGCTTAGCAAGTAACTTAATAATCAATACTTCGGTGGAATCTTCAACCAGTTTTGCCCATTTACCATATCTTTAGGCACTGATTTGGAAAATCAAGAAAATTATGATTTCCTTCAAAAGGTAAAAATCATTCTTAACTAAATATCAATTAACGTAGTAAACATAATTGAACTATGGCGAATCGTTCATTGAATTATTAGTTATGAAGCCACCTTAGAAGTTGGTCAAAACGGGTAAATGGTATAGAAABlpIseq verifiedGP62Mseq...chk2,9803,0003,0203,0403,0603,0803,1003,1203,140
    TACCACGAGGAACTGCAGCCATTAGATAATTAAAATGAGCTTCATCACTTAAGCCTGATCCAATTAAATTCATAGCATATACAGCTGGCATACACTCTGGAAATTGTGATAATGCATTTTCAACCATGAATTTTGAATAATCTTTTTGAGCAATAGAGCATTTAGTTTTATTATTATGGTGCTCCTTGACGTCGGTAATCTATTAATTTTACTCGAAGTAGTGAATTCGGACTAGGTTAATTTAAGTATCGTATATGTCGACCGTATGTGAGACCTTTAACACTATTACGTAAAAGTTGGTACTTAAAACTTATTAGAAAAACTCGTTATCTCGTAAATCAAAATAATAAPstIAflIIGP62seq verifiedgib.gp62.poolB.Fgib.gp62.poolA.RMsq.2N.GP62.B1.R Msq.2N...B2.F Msq.3...1.2RMseq.....chk3,1603,1803,2003,2203,2403,2603,2803,3003,320
    AATAGCTCCAATTATTTCAAAAAATTCATTTTCTGCTTTTTCTTTAAAAGAATCAGCAGCGGATTGGACAGCTGTCCAATCTTTTGAATACCAAGCAACTTGATGCTCGTTTAATTGAATATCATCTTTAAATAAGCTCATATCACTTCCACTGCATTTCGCATGCTAATTGAATTTATCGAGGTTAATAAAGTTTTTTAAGTAAAAGACGAAAAAGAAATTTTCTTAGTCGTCGCCTAACCTGTCGACAGGTTAGAAAACTTATGGTTCGTTGAACTACGAGCAAATTAACTTATAGTAGAAATTTATTCGAGTATAGTGAAGGTGACGTAAAGCGTACGATTAACTTANspISphIPshAIGP62GP44gib.gp62.poolA.FMsq.4N.GP44.B3.Rhomo1_f1Msq.4...1.F Ps...I3,3403,3603,3803,4003,4203,4403,4603,4803,500
    GAAAAGATAAGCTAAATGCAATTCAGTATTAGCTGCAATACCATGATACTGATTATTTTCGCCGACAATTTCGTACATACGAATAATACTTTGTGGAGTTACACGTGAATAGATTTCTTCGGCAAGTTTACCCACGAACCACGAATAATCAGCCGCATATTTTGGTGCTAAAGCTCTTTTCTATTCGATTTACGTTAAGTCATAATCGACGTTATGGTACTATGACTAATAAAAGCGGCTGTTAAAGCATGTATGCTTATTATGAAACACCTCAATGTGCACTTATCTAAAGAAGCCGTTCAAATGGGTGCTTGGTGCTTATTAGTCGGCGTATAAAACCACGATTTCGAGP44Mseq.gp...ib.chkspacer 13,5203,5403,5603,5803,6003,6203,6403,660
    CTGAGTTGTTTAACATCTTTATTTTTGAGAGACTCAAGAACATCATCAATAGCACCGGATCCTGCCCCACAGCATTCATAGATAACGTCGTCACTGATCTCATCCTCGTCGGGATTGTCTAAAGTAGCTTTGCAAGACTGCAAAACGTTTAACACACGTCTCATATCCCCATTAGGACTCAACAAATTGTAGAAATAAAAACTCTCTGAGTTCTTGTAGTAGTTATCGTGGCCTAGGACGGGGTGTCGTAAGTATCTATTGCAGCAGTGACTAGAGTAGGAGCAGCCCTAACAGATTTCATCGAAACGTTCTGACGTTTTGCAAATTGTGTGCAGAGTATAGGGGTAATCBamHIBmgBIBsmBIEsp3IGP4444.collar.3aa_bkbone3,6803,7003,7203,7403,7603,7803,8003,8203,840
    AAAGTTCTATTAAGGCCTTCTCCGCATTCGGAGACAACTTCAGCTTCTCATGCACCAAGACGTTGGCTATCCGACGCTCAATGGCCTCCTGGGGCAAGGGCTGAAATCTGAATCTCGTGCACCTACTCAATAACGCAGGTGTAAGTTTATGCGCATAATTGGCCAATACACAGAATTTCAAGATAATTCCGGAAGAGGCGTAAGCCTCTGTTGAAGTCGAAGAGTACGTGGTTCTGCAACCGATAGGCTGCGAGTTACCGGAGGACCCCGTTCCCGACTTTAGACTTAGAGCACGTGGATGAGTTATTGCGTCCACATTCAAATACGCGTATTAACCGGTTATGTGTCTTFspIMscIStuIBfuAIBspMIBstXIFspAIPaqCIGP443,8603,8803,9003,9203,9403,9603,9804,0004,020
    CCGCGTATTCTTGGTGTACCGTTCTATAACTCTTCTCAACGCATTTTGTGCGGCATTGGTCATGGCATCTGCTTCATCCAGTATAATTAACTTGAACCCTTTAGAGAAGATTTGTCTTGTAGAGGCAAAGTCTTTAATTTGATTCCTCACCACATCAATACCTCTGTCATCGGATGGCGCATAAGAACCACATGGCAAGATATTGAGAAGAGTTGCGTAAAACACGCCGTAACCAGTACCGTAGACGAAGTAGGTCATATTAATTGAACTTGGGAAATCTCTTCTAAACAGAACATCTCCGTTTCAGAAATTAAACTAAGGAGTGGTGTAGTTATGGAGACAGTAGCCTABstAPIGP444,0404,0604,0804,1004,1204,1404,1604,1804,200
    GCATTCAGCTCCAAAACCATGTTCGAGTAATTCTTACCATATATCTCACGTGCCAAAGCAACAATTGTAGAAGTTTTACCGGTACCTGGAGGCCCATAGAATAGAAGATGTGGCAATTTACCTTCATCTACAAATTTACGAACTGTGGTGATCACCTCATTTTGTCCGTACACTTCGTAAGTCGAGGTTTTGGTACAAGCTCATTAAGAATGGTATATAGAGTGCACGGTTTCGTTGTTAACATCTTCAAAATGGCCATGGACCTCCGGGTATCTTATCTTCTACACCGTTAAATGGAAGTAGATGTTTAAATGCTTGACACCACTAGTGGAGTAAAACAGGCATGTGAAAgeIBclIBpmIKpnIBsrFIAcc65IGP444,2204,2404,2604,2804,3004,3204,3404,360
    CGTCCAACGTTTCGGGTCTGTATTTTTCAACCCATGGAAGGTTTTCTTTGCTCCTCTTCTCTGTACTTGTCGACATAATTTCCTCATTCAAGTTTTAGTGTAAATTATAAAGGCCGAAGCCCTCTATTAAAAATCGTGGGTAGAATCAGCTTCAAGAGCTACCACATAATTCGCGGCAGGTTGCAAAGCCCAGACATAAAAAGTTGGGTACCTTCCAAAAGAAACGAGGAGAAGAGACATGAACAGCTGTATTAAAGGAGTAAGTTCAAAATCACATTTAATATTTCCGGCTTCGGGAGATAATTTTTAGCACCCATCTTAGTCGAAGTTCTCGATGGTGTATTAAGCGCAccIBtgINcoISalIStyIBseRIHincIIGP44GP45Mseq.GP44.B1.F homo2_f1termina...reviewMsq...R 4,3804,4004,4204,4404,4604,4804,5004,5204,540
    TGTTCACCTTCAAATTTAGCAGCACCTTGTTTACCTTTTGCCCAAAGCAGAAGTTTATAATTTCCTGGTTGCATTTTCATATTTGCCATATTGATAATGAAATTAAATGTATTTTCACCATCATAATCACCAAGAGTCAAAGAATATTTAACCCGGGTCAGAGCAGAATCTTCTAACAAGTGGAAGTTTAAATCGTCGTGGAACAAATGGAAAACGGGTTTCGTCTTCAAATATTAAAGGACCAACGTAAAAGTATAAACGGTATAACTATTACTTTAATTTACATAAAAGTGGTAGTATTAGTGGTTCTCAGTTTCTTATAAATTGGGCCCAGTCTCGTCTTAGAAGATSmaIXmaITspMIGP45Mseq-GP45-R 4,5604,5804,6004,6204,6404,6604,6804,7004,720
    CTTTATTAAAACCGTTAATTACGATTTTACCTTCTTTTACCGTGATAGCAATTGTATCAATTTGCAGACCACGAGATACACGCAACAGCTGTTGAAGGTCTTCAGCTTTAATTTCAGTAACAGCAGATGCTACCGGGAATGGAATTGGTTTATTAGGAGCAACTACTGTACTCGGGAAATAATTTTGGCAATTAATGCTAAAATGGAAGAAAATGGCACTATCGTTAACATAGTTAAACGTCTGGTGCTCTATGTGCGTTGTCGACAACTTCCAGAAGTCGAAATTAAAGTCATTGTCGTCTACGATGGCCCTTACCTTAACCAAATAATCCTCGTTGATGACATGAGCCBbsIGP45Msq.4N.GP45.B1.R Msq.3N...B2.F Xm...I4,7404,7604,7804,8004,8204,8404,8604,8804,900
    ATCGGCTGCTGGCCAAAAAATTGTTGAGCGGGCATCAGCAATTTTAATATTTCCATCTTCTGACTGGGAAATTTCTGCATCATCATTAACTAAAGACAGAATACCGAGAAAACCGTTCAAATCGTAAATTGCTACATCAAAATCAATAACGTCAGAAATATTTGCTTCCGCATAATAGCCGACGACCGGTTTTTTAACAACTCGCCCGTAGTCGTTAAAATTATAAAGGTAGAAGACTGACCCTTTAAAGACGTAGTAGTAATTGATTTCTGTCTTATGGCTCTTTTGGCAAGTTTAGCATTTAACGATGTAGTTTTAGTTATTGCAGTCTTTATAAACGAAGGCGTATTBmrIMscIXcmIGP45Mseq-GP45-F XcmI4,9204,9404,9604,9805,0005,0205,0405,060
    GTTGTACCATTAACTGCGCGAGTCATAATAAATTGACCGGATTTAAGCATAATACCAGAGTTAATAGTAGCGAAATTTTTAAGCAGAGCAGTAGTATCTTTAGACAGTTTCATGTAATTTCCTTCAATTCAAATGAGATTTAATTTTATAACTAATTTAATAAAGCAATTAACGACAACATGGTAATTGACGCGCTCAGTATTATTTAACTGGCCTAAATTCGTATTATGGTCTCAATTATCATCGCTTTAAAAATTCGTCTCGTCATCATAGAAATCTGTCAAAGTACATTAAAGGAAGTTAAGTTTACTCTAAATTAAAATATTGATTAAATTATTTCGTTAATTGCTGP45Msq.4N.GP45.B1.F 5,0805,1005,1205,1405,1605,1805,2005,2205,240
    TTAAAATCAGCCGCAATTGTTTCCGCAACAATTTGAGCAGCAACAATTAGACGTTCATCTGCGGGGTAATATCAGAAAGAGACAAAACCCATGCTCGACGAATTTTATTTTGGTTTTGTGGATTTGATTCAGAACGCACGTGTTTTGGCTGAATATCTTTTACATCAACAGTATAAATTTTAGTCGGCGTTAACAAAGGCGTTGTTAAACTCGTCGTTGTTAATCTGCAAGTAGACGCCCCATTATAGTCTTTCTCTGTTTTGGGTACGAGCTGCTTAAAATAAAACCAAAACACCTAAACTAAGTCTTGCGTGCACAAAACCGACTTATAGAAAATGTAGTTGTCATATBsaBIExtracted region from T4 genomehomologous arm 4GAP2-Trans-clmp-R H4-fwd-GAP-clamp seq verified5,2605,2805,3005,3205,3405,3605,3805,4005,420
    ATTCACAGTAATTTTAGTCATAATACACCTTTAGTCATAATAATCAGTAACAGTCCAAGCTTCATTTCTATTGGACATTATTTTTGTATATTCTGCTTTAAATGCATTCCTAAGCATAGATTCAGTAACTATATGCTCTTCATTAGAAAAATTATTTCTCAGAATATATCGTTTTTAAGTGTCATTAAAATCAGTATTATGTGGAAATCAGTATTATTAGTCATTGTCAGGTTCGAAGTAAAGATAACCTGTAATAAAAACATATAAGACGAAATTTACGTAAGGATTCGTATCTAAGTCATTGATATACGAGAAGTAATCTTTTTAATAAAGAGTCTTATATAGCAAAASapIBspQIBpu10IHindIIIExtracted region from T4 genomehomologous arm 4seq verified5,4405,4605,4805,5005,5205,5405,5605,5805,600
    ATTTCAGGAATAGTTAATAGATGCTGTCCAGTTGAATATTCCATGTTTTTCCTCCATAGAGATTATACTCTAATAAATTAAAGCATAATCTCTTATAAATTAAACCATTACAGTAAATCGACCAACTTTCTTCATTTGAAGATGCTGACCATATTCTTGCGGGTCATGGTCTTTATAAAGTCCTTATCAATTATCTACGACAGGTCAACTTATAAGGTACAAAAAGGAGGTATCTCTAATATGAGATTATTTAATTTCGTATTAGAGAATATTTAATTTGGTAATGTCATTTAGCTGGTTGAAAGAAGTAAACTTCTACGACTGGTATAAGAACGCCCAGTACCAGAAATExtracted region from T4 genomehomologous arm 4seq verified5,6205,6405,6605,6805,7005,7205,7405,760
    TGCGAAATTATAAAAACGTTAGTGTTTTTCATTGAATTTATAATATTAGCTACACCTTTAATACCTTCGGCATCAAATGACCCATCAAACACTTCATCAAGAATTAATGTACTAATACTAACACCAGATACGATAGAAGCAATATCACGCCAAGTAAATAAAAGAGCAATATCGAACGCTTTAATATTTTTGCAATCACAAAAAGTAACTTAAATATTATAATCGATGTGGAAATTATGGAAGCCGTAGTTTACTGGGTAGTTTGTGAAGTAGTTCTTAATTACATGATTATGATTGTGGTCTATGCTATCTTCGTTATAGTGCGGTTCATTTATTTTCTCGTTATAGCTClaIBspDIExtracted region from T4 genomehomologous arm 4seq verified5,7805,8005,8205,8405,8605,8805,9005,9205,940
    TTCGTGCCTTTTCACCTTCACTAAATGAAGCATAACTAAAATCTTCACGACCACGGGATTTAATTGTCTCATTAAATTCTTCATCTAATGTAAACACATAATCCGCTTCCATTATTTTAAGATAATGGTTAATCTGCTTATTAAATAATGGAATGTACTTTTTAATAATAGCACCAAGCACGGAAAAGTGGAAGTGATTTACTTCGTATTGATTTTAGAAGTGCTGGTGCCCTAAATTAACAGAGTAATTTAAGAAGTAGATTACATTTGTGTATTAGGCGAAGGTAATAAAATTCTATTACCAATTAGACGAATAATTTATTACCTTACATGAAAAATTATTATCGTGGBtgIExtracted region from T4 genomehomologous arm 4seq verified5,9605,9806,0006,0206,0406,0606,0806,1006,120
    TTTAATACCAGAATCTTTGAGCATATCAGTCAAAATTCCTCGGTGGTATTTTTCCATTACTAAATTAGTTTTTGTCTTAACAATTTTATCAAGTTCTTCTTGAAGCAGTGCTATTTCATCAGCATGGTCAATAAACTCAGAAGATGCTTTTTCTATAGCCGCTTTAACTTTTTTAAAATTATGGTCTTAGAAACTCGTATAGTCAGTTTTAAGGAGCCACCATAAAAAGGTAATGATTTAATCAAAAACAGAATTGTTAAAATAGTTCAAGAAGAACTTCGTCACGATAAAGTAGTCGTACCAGTTATTTGAGTCTTCTACGAAAAAGATATCGGCGAAATTGAAAAAATExtracted region from T4 genomehomologous arm 4seq verified6,1406,1606,1806,2006,2206,2406,2606,2806,300
    GCTTTATCTACTGCTGCGATCAGAGATTGCTTTTTATTGCGAATATCACCAGAGGTTTTCACCGTCATCACCGAAACGCGCGACGAAATAGATGACGACGCTAGTCTCTAACGAAAAATAACGCTTATAGTGGTCTCCAAAAGTGGCAGTAGTGGCTTTGCGCGCTBsmBIEsp3Iseq verifiedHom4-loc1-gib Extracted region from T4 genomehomologous arm 4pUC-bkbone-Kpn1 6,3206,3406,3606,380
    • Plasmid
    • Relevant Items
    • Metadata
    • Description
    • Linear Map
    Editing disabled on read-only sequence.
    6383 bp450050005500600050010001500GP45rep originBseYI, PspFIGsaIEco57I, AcuIEcoP15Ibla gene

    Welcome to Benchling!

    Sign in to view data.

    New digest

    Saved digests

    Enzyme AatII
    Enzyme lists
    Cut sites visible on maps
    Find enzyme
    Clear selected
    Name Cuts
    Selected Color
    Show enzymes that cut

    Primers

    Pairs

    Create primers
    Attach existing
    Detach all primers
    Primer Position Product size

    Version history

     Show full history
    Change User Timestamp

    Sequence Alignments

    Create new alignment
    Saved alignments

    Sequence Info

    Tags

    Name
    Parent version
    Folder
    Topology
    Start index
    Locked
    Created
    --
    Length
    --
    Export data
    Download
    Split Workspace
    Bases
    6383