Welcome to Benchling!

You're looking at a DNA Sequence. Here are some things you can do with it:

Create an alignment

  1. Create alignments with both DNA and AA sequences.
  2. Bulk-align multiple sequences at once.
  3. Powerful visualization tool to inspect alignments in detail.

Design a primer

Create a translation

Design a CRISPR guide

Assemble and transform a sequence

Benchling is actively tested against the latest versions of Chrome, Firefox, Safari, and Edge. **It doesn't look like your current browser is supported** - for more information, [click here](/browsers).
Monospace normal
Monospace bold
working...
Advanced Settings
pSB1C3_BBa_K4720024
  • Sequence Map
Editing disabled on read-only sequence.
CCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGGGGGGCAAGTCGGGCTGGCGACGCGGAATAGGCCATTGATAGCAGAACTCAGGTTGGGCCATTCTGTGCTGAATAGCGGTGACCGTCGTCGGTGACCATTGTCCTAATCGTCTCGCTCCATACATCCGCCACGATGTCTCAAGAACTTCACCACCGGATTGATGCCGATGTGATCAlwNIori_pMB120406080100120140160
AAGAACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATCTTTTCTACGTTCTTGTCATAAACCATAGACGCGAGACGACTTCGGTCAATGGAAGCCTTTTTCTCAACCATCGAGAACTAGGCCGTTTGTTTGGTGGCGACCATCGCCACCAAAAAAACAAACGTTCGTCGTCTAATGCGCGTCTTTTTTTCCTAGAGTTCTTCTAGGAAACTAGAAAAGATGCori_pMB1180200220240260280300320340
GGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAAATTAAAAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGGTCTGACAGCTCGAGGCTTGGATTCTCACCAATAAAAACCCAGACTGCGAGTCACCTTGCTTTTGAGTGCAATTCCCTAAAACCAGTACTCTAATAGTTTTTCCTAGAAGTGGATCTAGGAAAATTTAATTTTTACTTCAAAATTTAGTTAGATTTCATATATACTCATTTGAACCAGACTGTCGAGCTCCGAACCTAAGAGTGGTTATTTTTAvaITliIXhoIBsoBIBspHIPspXIPaeR7ITO terminator360380400420440460480500520
ACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAATGCGGGCCGCCGTTGGCTCGCAAGACTTGTTTAGGTCTACCTCAAGACTCCAGTAATGACCTAGATAGTTGTCCTCAGGTTCGCTCGAGCTATAGTTTAATGCGGGGCGGGACGGTGAGTAGCGTCATGACAACATTAAGTAATTCGTAAGACGGCTGTACCTTCGGTAGTGTTTBsmISacIScaITatIBanIIBtgZIEcoRVEco53kITO terminatorcmR540560580600620640660680700
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCGCCGTACTACTTGGACTTAGCGGTCGCCGTAGTCGTGGAACAGCGGAACGCATATTATAAACGGGTACCACTTTTGCCCCCGCTTCTTCAACAGGTATAACCGGTGCAAATTTAGTTTTGACCACTTTGAGTGGGTCCCTAACCGACTCTGCTTTTTGTATAAGAGTTATTTGGGBtgIMscINcoIPasISspIStyIBcoDIBsmAIBsmBIEsp3IPflMIcmR720740760780800820840860
TTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTAAATCCCTTTATCCGGTCCAAAAGTGGCATTGTGCGGTGTAGAACGCTTATATACACATCTTTGACGGCCTTTAGCAGCACCATAAGTGAGGTCTCGCTACTTTTGCAAAGTCAAACGAGTACCTTTTGCCACATTGTTCCCACTTGTGATAGGGTATAGTGGTCGAGTGGCAGAAclIBpmIBtgZIcmR8809009209409609801,0001,0201,040
TTCATTGCCATACGAAATTCCGGATGAGCATTCATCAGGCGGGCAAGAATGTGAATAAAGGCCGGATAAAACTTGTGCTTATTTTTCTTTACGGTCTTTAAAAAGGCCGTAATATCCAGCTGAACGGTCTGGTTATAGGTACATTGAGCAACTGACTGAAATGCCTCAAAATGTTAAGTAACGGTATGCTTTAAGGCCTACTCGTAAGTAGTCCGCCCGTTCTTACACTTATTTCCGGCCTATTTTGAACACGAATAAAAAGAAATGCCAGAAATTTTTCCGGCATTATAGGTCGACTTGCCAGACCAATATCCATGTAACTCGTTGACTGACTTTACGGAGTTTTACAABsmIBspEIBsrDIPvuIIcmR1,0601,0801,1001,1201,1401,1601,1801,2001,220
CTTTACGATGCCATTGGGATATATCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTTAGCTTCCTTAGCTCCTGAAAATCTCGATAACTCAAAAAATACGCCCGGTAGTGATCTTATTTCATTATGGTGAAAGTTGGAACCTCTTACGTGCCCGATCAACTCGAGTGCCACGAAATGCTACGGTAACCCTATATAGTTGCCACCATATAGGTCACTAAAAAAAGAGGTAAAATCGAAGGAATCGAGGACTTTTAGAGCTATTGAGTTTTTTATGCGGGCCATCACTAGAATAAAGTAATACCACTTTCAACCTTGGAGAATGCACGGGCTAGTTGAGCTCACGGTGAvaIMslITliIXhoIBaeGIBsaAIBsoBIPspXIPaeR7IcmR1,2401,2601,2801,3001,3201,3401,3601,3801,400
CTGACGTCTAAGAAACCATTATTATCATGACATTAACCTATAAAAATAGGCGTATCACGAGGCAGAATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGAATTCGCGGCCGCTTCTAGAGTAACACCGTGCGTGTTGACTATTTTACCTCTGGCGGTGATAGACTGCAGATTCTTTGGTAATAATAGTACTGTAATTGGATATTTTTATCCGCATAGTGCTCCGTCTTAAAGTCTATTTTTTTTAGGAATCGAAAGCGATTCCTACTAAAGACCTTAAGCGCCGGCGAAGATCTCATTGTGGCACGCACAACTGATAAAATGGAGACCGCCACTATEagINotIXbaIZraIAatIIBsaHIBspHIEcoRIHincIIprefixOR2OR1VF21,4201,4401,4601,4801,5001,5201,5401,560
ATGGTTGCTACTAGAGATTAAAGAGGAGAAATACTAGATGGCTTCCTCCGAAGACGTTATCAAAGAGTTCATGCGTTTCAAAGTTCGTATGGAAGGTTCCGTTAACGGTCACGAGTTCGAAATCGAAGGTGAAGGTGAAGGTCGTCCGTACGAAGGTACCCAGACCGCTAAACTGTACCAACGATGATCTCTAATTTCTCCTCTTTATGATCTACCGAAGGAGGCTTCTGCAATAGTTTCTCAAGTACGCAAAGTTTCAAGCATACCTTCCAAGGCAATTGCCAGTGCTCAAGCTTTAGCTTCCACTTCCACTTCCAGCAGGCATGCTTCCATGGGTCTGGCGATTTGACBaeIBanIHpaIKpnIPsrIBseRIBsiWIBstBIAcc65IHincIIBBa_K516030mRFP1rbs1,5801,6001,6201,6401,6601,6801,7001,7201,740
AAAGTTACCAAAGGTGGTCCGCTGCCGTTCGCTTGGGACATCCTGTCCCCGCAGTTCCAGTACGGTTCCAAAGCTTACGTTAAACACCCGGCTGACATCCCGGACTACCTGAAACTGTCCTTCCCGGAAGGTTTCAAATGGGAACGTGTTATGAACTTCGAAGACGGTGGTGTTGTTTCAATGGTTTCCACCAGGCGACGGCAAGCGAACCCTGTAGGACAGGGGCGTCAAGGTCATGCCAAGGTTTCGAATGCAATTTGTGGGCCGACTGTAGGGCCTGATGGACTTTGACAGGAAGGGCCTTCCAAAGTTTACCCTTGCACAATACTTGAAGCTTCTGCCACCACAACAhdIPfoIPfoIAvaIIBsmFIBsmFIBstBIAflIIIHindIIIBBa_K516030mRFP11,7601,7801,8001,8201,8401,8601,8801,9001,920
TTACCGTTACCCAGGACTCCTCCCTGCAAGACGGTGAGTTCATCTACAAAGTTAAACTGCGTGGTACCAACTTCCCGTCCGACGGTCCGGTTATGCAGAAAAAAACCATGGGTTGGGAAGCTTCCACCGAACGTATGTACCCGGAAGACGGTGCTCTGAAAGGTGAAATCAAAATAATGGCAATGGGTCCTGAGGAGGGACGTTCTGCCACTCAAGTAGATGTTTCAATTTGACGCACCATGGTTGAAGGGCAGGCTGCCAGGCCAATACGTCTTTTTTTGGTACCCAACCCTTCGAAGGTGGCTTGCATACATGGGCCTTCTGCCACGAGACTTTCCACTTTAGTTTTABaeIBanIBtgIKpnINcoIStyIAvaIIBseRIPflMIRsrIIAcc65IHindIIIBBa_K516030mRFP11,9401,9601,9802,0002,0202,0402,0602,0802,100
GCGTCTGAAACTGAAAGACGGTGGTCACTACGACGCTGAAGTTAAAACCACCTACATGGCTAAAAAACCGGTTCAGCTGCCGGGTGCTTACAAAACCGACATCAAACTGGACATCACCTCCCACAACGAAGACTACACCATCGTTGAACAGTACGAACGTGCTGAAGGTCGTCACCGCAGACTTTGACTTTCTGCCACCAGTGATGCTGCGACTTCAATTTTGGTGGATGTACCGATTTTTTGGCCAAGTCGACGGCCCACGAATGTTTTGGCTGTAGTTTGACCTGTAGTGGAGGGTGTTGCTTCTGATGTGGTAGCAACTTGTCATGCTTGCACGACTTCCAGCAGTGAgeIMslIBsaXIBsrFIBstXIPshAIPvuIIBBa_K516030mRFP12,1202,1402,1602,1802,2002,2202,2402,260
TCCACCGGTGCTTAATAACGCTGATAGTGCTAGTGTAGATCGCTACTAGAGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCTACTAGAGTCACACTGGCTCACCTTCGGGTGGGCCTTTCTGCGTAGGTGGCCACGAATTATTGCGACTATCACGATCACATCTAGCGATGATCTCGGTCCGTAGTTTATTTTGCTTTCCGAGTCAGCTTTCTGACCCGGAAAGCAAAATAGACAACAAACAGCCACTTGCGAGAGATGATCTCAGTGTGACCGAGTGGAAGCCCACCCGGAAAGACGCAAgeIBmrIPsrIBsrFISgrAIBBa_K516030double termmRFP12,2802,3002,3202,3402,3602,3802,4002,4202,440
TTATATACTAGTAGCGGCCGCTGCAGTCCGGCAAAAAAGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTATGCAGGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAGCGGTATCAGCTCACTCAAAGGCGGAATATATGATCATCGCCGGCGACGTCAGGCCGTTTTTTCCCGTTCCACAGTGGTGGGACGGGAAAAAGAAATTTTGGCTTTTCTAATGAAGCGCAATACGTCCGAAGGAGCGAGTGACTGAGCGACGCGAGCCAGCAAGCCGACGCCGCTCGCCATAGTCGAGTGAGTTTCCGCCEagINotIPstISpeIBsrBIterminatorsuffixVR2,4602,4802,5002,5202,5402,5602,5802,6002,620
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCACAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACATTATGCCAATAGGTGTCTTAGTCCCCTATTGCGTCCTTTCTTGTACACTCGTTTTCCGGTCGTTTTCCGGTCCTTGGCATTTTTCCGGCGCAACGACCGCAAAAAGGTGTCCGAGGCGGGGGGACTGCTCGTAGTGTTTTTAGCTGCGAGTTCAGTCTCCACCGCTTTGGGCTGDrdIEciINspIPciIAflIIIori_pMB12,6402,6602,6802,7002,7202,7402,7602,7802,800
AGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGTCCTGATATTTCTATGGTCCGCAAAGGGGGACCTTCGAGGGAGCACGCGAGAGGACAAGGCTGGGACGGCGAATGGCCTATGGACAGGCGGAAAGAGGGAAGCCCTTCGCACCGCGAAAGAGTATCGAGTGCGACATCCATAGAGTCAAGCCACATCCAGCAAGCGAGGTTCGACEciIBciVIBseYIHaeIIori_pMB12,8202,8402,8602,8802,9002,9202,9402,960
GGCTGTGTGCACGAACCCGACACACGTGCTTGApaLIBaeGIori_pMB12,980
  • Plasmid
Editing disabled on read-only sequence.
2991 bp2000225025002750250500cmRdouble term

Welcome to Benchling!

Sign in to view data.

New digest

Saved digests

Enzyme AatII
Enzyme lists
Cut sites visible on maps
Find enzyme
Name Cuts
Selected Color
Show enzymes that cut

Primers

Version history

 Show full history
Change User Timestamp

Sequence Alignments

Saved alignments

Sequence Info

Tags

Name
Parent version
Folder
Topology
Start index
Locked
Created
--
Length
--
Export data
Split Workspace
Bases
2991