Welcome to Benchling!

You're looking at a DNA Sequence. Here are some things you can do with it:

Create an alignment

  1. Create alignments with both DNA and AA sequences.
  2. Bulk-align multiple sequences at once.
  3. Powerful visualization tool to inspect alignments in detail.

Design a primer

Create a translation

Design a CRISPR guide

Assemble and transform a sequence

Benchling is actively tested against the latest versions of Chrome, Firefox, Safari, and Edge. **It doesn't look like your current browser is supported** - for more information, [click here](/browsers).
Monospace normal
Monospace bold
working...
Advanced Settings
XZ110 CMV-TO-signal-B2AR-V2-ADAR2dd(DD-E488Q-T501A) (FLP-IN)
  • Sequence Map
Editing disabled on read-only sequence.
cctgcctgaaaccgaactgcccgctgttctgcagccggtcgcggaggccatggatgcgatcgctgcggccgatcttagccagacgagcgggttcggcccattcggaccgcaaggaatcggtcaatacactacatggcgtgatttcatatgcgcgattgctgatccccatgtgtatggacggactttggcttgacgggcgacaagacgtcggccagcgcctccggtacctacgctagcgacgccggctagaatcggtctgctcgcccaagccgggtaagcctggcgttccttagccagttatgtgatgtaccgcactaaagtatacgcgctaacgactaggggtacacataNcoINdeIPvuIAsiSIRsrIIBstAPIHygromycin20406080100120140160
cactggcaaactgtgatggacgacaccgtcagtgcgtccgtcgcgcaggctctcgatgagctgatgctttgggccgaggactgccccgaagtccggcacctcgtgcacgcggatttcggctccaacaatgtcctgacggacaatggccgcataacagcggtcattgactggagcggtgaccgtttgacactacctgctgtggcagtcacgcaggcagcgcgtccgagagctactcgactacgaaacccggctcctgacggggcttcaggccgtggagcacgtgcgcctaaagccgaggttgttacaggactgcctgttaccggcgtattgtcgccagtaactgacctcgcBstAPIDraIIINmeAIIIHygromycin180200220240260280300320340
aggcgatgttcggggattcccaatacgaggtcgccaacatcttcttctggaggccgtggttggcttgtatggagcagcagacgcgctacttcgagcggaggcatccggagcttgcaggatcgccgcggctccgggcgtatatgctccgcattggtcttgaccaactctatcagagtccgctacaagcccctaagggttatgctccagcggttgtagaagaagacctccggcaccaaccgaacatacctcgtcgtctgcgcgatgaagctcgcctccgtaggcctcgaacgtcctagcggcgccgaggcccgcatatacgaggcgtaaccagaactggttgagatagtctcAjuISacIIHygromycin360380400420440460480500520
cttggttgacggcaatttcgatgatgcagcttgggcgcagggtcgatgcgacgcaatcgtccgatccggagccgggactgtcgggcgtacacaaatcgcccgcagaagcgcggccgtctggaccgatggctgtgtagaagtactcgccgatagtggaaaccgacgccccagcactgaaccaactgccgttaaagctactacgtcgaacccgcgtcccagctacgctgcgttagcaggctaggcctcggccctgacagcccgcatgtgtttagcgggcgtcttcgcgccggcagacctggctaccgacacatcttcatgagcggctatcacctttggctgcggggtcgtgaScaIHygromycin540560580600620640660680700
cgtccgagggcaaaggaatagcacgtactacgagatttcgattccaccgccgccttctatgaaaggttgggcttcggaatcgttttccgggacgccggctggatgatcctccagcgcggggatctcatgctggagttcttcgcccaccccaacttgtttattgcagcttataatggcaggctcccgtttccttatcgtgcatgatgctctaaagctaaggtggcggcggaagatactttccaacccgaagccttagcaaaaggccctgcggccgacctactaggaggtcgcgcccctagagtacgacctcaagaagcgggtggggttgaacaaataacgtcgaatattacNaeIPsiINgoMIVSV40 pAHygromycin720740760780800820840860
gttacaaataaagcaatagcatcacaaatttcacaaataaagcatttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtctgtataccgtcgacctctagctagagcttggcgtaatcatggtcatagctgtttcctgtgtgaaattgttacaatgtttatttcgttatcgtagtgtttaaagtgtttatttcgtaaaaaaagtgacgtaagatcaacaccaaacaggtttgagtagttacatagaatagtacagacatatggcagctggagatcgatctcgaaccgcattagtaccagtatcgacaaaggacacactttaacaatBsmIBstZ17ISV40 pA8809009209409609801,0001,0201,040
tccgctcacaattccacacaacatacgagccggaagcataaagtgtaaagcctggggtgcctaatgagtgagctaactcacattaattgcgttgcgctcactgcccgctttccagtcgggaaacctgtcgtgccagctgcattaatgaatcggccaacgcgcggggagaggcggtaggcgagtgttaaggtgtgttgtatgctcggccttcgtatttcacatttcggaccccacggattactcactcgattgagtgtaattaacgcaacgcgagtgacgggcgaaaggtcagccctttggacagcacggtcgacgtaattacttagccggttgcgcgcccctctccgcca1,0601,0801,1001,1201,1401,1601,1801,2001,220
ttgcgtattgggcgctcttccgcttcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaacgcataacccgcgagaaggcgaaggagcgagtgactgagcgacgcgagccagcaagccgacgccgctcgccatagtcgagtgagtttccgccattatgccaataggtgtcttagtcccctattgcgtcctttcttgtacactcgttttccggtcgttttccggtccttggcatPciISapIBspQIpUC ori1,2401,2601,2801,3001,3201,3401,3601,3801,400
aaaaggccgcgttgctggcgtttttccataggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcctgttccgaccctgccgcttaccggatattttccggcgcaacgaccgcaaaaaggtatccgaggcggggggactgctcgtagtgtttttagctgcgagttcagtctccaccgctttgggctgtcctgatatttctatggtccgcaaagggggaccttcgagggagcacgcgagaggacaaggctgggacggcgaatggcctatpUC ori1,4201,4401,4601,4801,5001,5201,5401,560
cctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagaggacaggcggaaagagggaagcccttcgcaccgcgaaagagtatcgagtgcgacatccatagagtcaagccacatccagcaagcgaggttcgacccgacacacgtgcttggggggcaagtcgggctggcgacgcggaataggccattgatagcagaactcaggttgggccattctpUC ori1,5801,6001,6201,6401,6601,6801,7001,7201,740
cacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaaggacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctgtgctgaatagcggtgaccgtcgtcggtgaccattgtcctaatcgtctcgctccatacatccgccacgatgtctcaagaacttcaccaccggattgatgccgatgtgatcttcctgtcataaaccatagacgcgagacgacttcggtcaatggaagcctttttctcaaccatcgapUC ori1,7601,7801,8001,8201,8401,8601,8801,9001,920
cttgatccggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggaactaggccgtttgtttggtggcgaccatcgccaccaaaaaaacaaacgttcgtcgtctaatgcgcgtctttttttcctagagttcttctaggaaactagaaaagatgccccagactgcgagtcaccttgcttttgagtgcaattccctaaaaccagtactctaatagtttttcpUC ori1,9401,9601,9802,0002,0202,0402,0602,0802,100
gatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctgacagttaccaatgcttaatcagtgaggcacctatctcagcgatctgtctatttcgttcatccatagttgcctgactccccgtcgtgtagataactacgctagaagtggatctaggaaaatttaatttttacttcaaaatttagttagatttcatatatactcatttgaaccagactgtcaatggttacgaattagtcactccgtggatagagtcgctagacagataaagcaagtaggtatcaacggactgaggggcagcacatctattgatgcAhdIAmp (bla)2,1202,1402,1602,1802,2002,2202,2402,260
atacgggagggcttaccatctggccccagtgctgcaatgataccgcgagacccacgctcaccggctccagatttatcagcaataaaccagccagccggaagggccgagcgcagaagtggtcctgcaactttatccgcctccatccagtctattaattgttgccgggaagctagagtatgccctcccgaatggtagaccggggtcacgacgttactatggcgctctgggtgcgagtggccgaggtctaaatagtcgttatttggtcggtcggccttcccggctcgcgtcttcaccaggacgttgaaataggcggaggtaggtcagataattaacaacggcccttcgatctcNmeAIIIAmp (bla)2,2802,3002,3202,3402,3602,3802,4002,4202,440
taagtagttcgccagttaatagtttgcgcaacgttgttgccattgctacaggcatcgtggtgtcacgctcgtcgtttggtatggcttcattcagctccggttcccaacgatcaaggcgagttacatgatcccccatgttgtgcaaaaaagcggttagctccttcggtcctccgatattcatcaagcggtcaattatcaaacgcgttgcaacaacggtaacgatgtccgtagcaccacagtgcgagcagcaaaccataccgaagtaagtcgaggccaagggttgctagttccgctcaatgtactagggggtacaacacgttttttcgccaatcgaggaagccaggaggctaAclIFspIAmp (bla)2,4602,4802,5002,5202,5402,5602,5802,6002,620
cgttgtcagaagtaagttggccgcagtgttatcactcatggttatggcagcactgcataattctcttactgtcatgccatccgtaagatgcttttctgtgactggtgagtactcaaccaagtcattctgagaatagtgtatgcggcgaccgagttgctcttgcccggcgtcaatagcaacagtcttcattcaaccggcgtcacaatagtgagtaccaataccgtcgtgacgtattaagagaatgacagtacggtaggcattctacgaaaagacactgaccactcatgagttggttcagtaagactcttatcacatacgccgctggctcaacgagaacgggccgcagttatPvuIScaIAmp (bla)2,6402,6602,6802,7002,7202,7402,7602,7802,800
cgggataataccgcgccacatagcagaactttaaaagtgctcatcattggaaaacgttcttcggggcgaaaactctcaaggatcttaccgctgttgagatccagttcgatgtaacccactcgtgcacccaactgatcttcagcatcttttactttcaccagcgtttctgggtgaggccctattatggcgcggtgtatcgtcttgaaattttcacgagtagtaaccttttgcaagaagccccgcttttgagagttcctagaatggcgacaactctaggtcaagctacattgggtgagcacgtgggttgactagaagtcgtagaaaatgaaagtggtcgcaaagacccactcAclIXmnIAmp (bla)2,8202,8402,8602,8802,9002,9202,9402,960
caaaaacaggaaggcaaaatgccgcaaaaaagggaataagggcgacacggaaatgttgaatactcatactcttcctttttcaatattattgaagcatttatcagggttattgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaataggggttccgcgcacgtttttgtccttccgttttacggcgttttttcccttattcccgctgtgcctttacaacttatgagtatgagaaggaaaaagttataataacttcgtaaatagtcccaataacagagtactcgcctatgtataaacttacataaatctttttatttgtttatccccaaggcgcgtgSspIbla promoterAmp (bla)2,9803,0003,0203,0403,0603,0803,1003,1203,140
atttccccgaaaagtgccacctgacgtcgacggatcgggagatctcccgatcccctatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagtatctgctccctgcttgtgtgttggaggtcgctgagtagtgcgcgagcaaaatttaagctacaacaaggctaaaggggcttttcacggtggactgcagctgcctagccctctagagggctaggggataccacgtgagagtcatgttagacgagactacggcgtatcaattcggtcatagacgagggacgaacacacaacctccagcgactcatcacgcgctcgttttaaattcgatgttgttccgSgrDI3,1603,1803,2003,2203,2403,2603,2803,3003,320
aaggcttgaccgacaattgcatgaagaatctgcttagggttaggcgttttgcgctgcttcgtacgggccagatatacgcgttgacattgattattgactagttattaatagtaatcaattacggggtcattagttcatagcccatatatggagttccgcgttacataacttacggttccgaactggctgttaacgtacttcttagacgaatcccaatccgcaaaacgcgacgaagcatgcccggtctatatgcgcaactgtaactaataactgatcaataattatcattagttaatgccccagtaatcaagtatcgggtatatacctcaaggcgcaatgtattgaatgccMfeIMluISpeIBsiWICMVCMV promoter (with TetOs)3,3403,3603,3803,4003,4203,4403,4603,4803,500
taaatggcccgcctggctgaccgcccaacgacccccgcccattgacgtcaataatgacgtatgttcccatagtaacgccaatagggactttccattgacgtcaatgggtggagtatttacggtaaactgcccacttggcagtacatcaagtgtatcatatgccaagtacgcccccatttaccgggcggaccgactggcgggttgctgggggcgggtaactgcagttattactgcatacaagggtatcattgcggttatccctgaaaggtaactgcagttacccacctcataaatgccatttgacgggtgaaccgtcatgtagttcacatagtatacggttcatgcgggggNdeICMVCMV promoter (with TetOs)3,5203,5403,5603,5803,6003,6203,6403,660
tattgacgtcaatgacggtaaatggcccgcctggcattatgcccagtacatgaccttatgggactttcctacttggcagtacatctacgtattagtcatcgctattaccatggtgatgcggttttggcagtacatcaatgggcgtggatagcggtttgactcacggggatttccaataactgcagttactgccatttaccgggcggaccgtaatacgggtcatgtactggaataccctgaaaggatgaaccgtcatgtagatgcataatcagtagcgataatggtaccactacgccaaaaccgtcatgtagttacccgcacctatcgccaaactgagtgcccctaaaggtNcoICspCISnaBICMVCMV promoter (with TetOs)3,6803,7003,7203,7403,7603,7803,8003,8203,840
agtctccaccccattgacgtcaatgggagtttgttttggcaccaaaatcaacgggactttccaaaatgtcgtaacaactccgccccattgacgcaaatgggcggtaggcgtgtacggtgggaggtctatataagcagagctctccctatcagtgatagagatctccctatcagtgtcagaggtggggtaactgcagttaccctcaaacaaaaccgtggttttagttgccctgaaaggttttacagcattgttgaggcggggtaactgcgtttacccgccatccgcacatgccaccctccagatatattcgtctcgagagggatagtcactatctctagagggatagtcacSacIBsaBIEco53kICMVCMV promoter (with TetOs)TetR binding sitesTetOTetO3,8603,8803,9003,9203,9403,9603,9804,0004,020
atagagatcgtcgacgagctcgtttagtgaaccgtcagatcgcctggagacgccatccacgctgttttgacctccatagaagacaccgggaccgatccagcctccggactctagcgtttaaacttaagcttcgccaccatgaagacgatcatcgccctgagctacatcttctgcctatctctagcagctgctcgagcaaatcacttggcagtctagcggacctctgcggtaggtgcgacaaaactggaggtatcttctgtggccctggctaggtcggaggcctgagatcgcaaatttgaattcgaagcggtggtacttctgctagtagcgggactcgatgtagaagacggPmeISacIAflIIBsaBIBsmBIEsp3ISgrDIEco53kIHindIIIMK2TI4IA6LS8YI10FC124164-6788CMV promoter (with TetOs)Signal/Flaghomolog4,0404,0604,0804,1004,1204,1404,1604,1804,200
tggtattcgccgactacaaggacgatgatgacgccagcGGCgggcaacccgggaacggcagcgccttcttgctggcacccaatagaagccatgcgccggaccacgacgtcacgcagcaaagggacgaggtgtgggtggtgggcatgggcatcgtcatgtctctcatcgtcctggcaccataagcggctgatgttcctgctactactgcggtcgCCGcccgttgggcccttgccgtcgcggaagaacgaccgtgggttatcttcggtacgcggcctggtgctgcagtgcgtcgtttccctgctccacacccaccacccgtacccgtagcagtacagagagtagcaggaccgSmaIXmaITspMILV14FA16DY18KD20DD22DA24SG26GQ28PG30NG32SA34FL36LA38PN40RS42HA44PD46HD48VT50QQ52RD54EV56WV58VG60MG62IV64MS66LI68VL70A4164-6788hB2ARSignal/Flaghomolog4,2204,2404,2604,2804,3004,3204,3404,360
catcgtgtttggcaatgtgctggtcatcacagccattgccaagttcgagcgtctgcagacggtcaccaactacttcatcacttcactggcctgtgctgatctggtcatgggcctggcagtggtgccctttggggccgcccatattcttatgaaaatgtggacttttggcaacttcgtagcacaaaccgttacacgaccagtagtgtcggtaacggttcaagctcgcagacgtctgccagtggttgatgaagtagtgaagtgaccggacacgactagaccagtacccggaccgtcaccacgggaaaccccggcgggtataagaatacttttacacctgaaaaccgttgaagBstEIII72VF74GN76VL78VI80TA82IA84KF86ER88LQ90TV92TN94YF96IT98SL100AC102AD104LV106MG108LA110VV112PF114GA116AH118IL120MK122MW124TF126GN128F4164-6788hB2AR4,3804,4004,4204,4404,4604,4804,5004,5204,540
tggtgcgagttttggacttccattgatgtgctgtgcgtcacggccagcattgagaccctgtgcgtgatcgcagtggatcgctactttgccattacttcacctttcaagtaccagagcctgctgaccaagaataaggcccgggtgatcattctgatggtgtggattgtgtcaggccaccacgctcaaaacctgaaggtaactacacgacacgcagtgccggtcgtaactctgggacacgcactagcgtcacctagcgatgaaacggtaatgaagtggaaagttcatggtctcggacgactggttcttattccgggcccactagtaagactaccacacctaacacagtccggSmaIStuIXmaITspMIW130CE132FW134TS136ID138VL140CV142TA144SI146ET148LC150VI152AV154DR156YF158AI160TS162PF164KY166QS168LL170TK172NK174AR176VI178IL180MV182WI184VS186G4164-6788hB2AR4,5604,5804,6004,6204,6404,6604,6804,7004,720
ttacctccttcttgcccattcagatgcactggtatcgggccacccaccaggaagccatcaactgctatgccaatgagacctgctgtgacttcttcacgaaccaagcctatgccattgcctcttccatcgtgtccttctacgttcccctggtgatcatggtcttcgtctactccagaatggaggaagaacgggtaagtctacgtgaccatagcccggtgggtggtccttcggtagttgacgatacggttactctggacgacactgaagaagtgcttggttcggatacggtaacggagaaggtagcacaggaagatgcaaggggaccactagtaccagaagcagatgaggtcL188TS190FL192PI194QM196HW198YR200AT202HQ204EA206IN208CY210AN212ET214CC216DF218FT220NQ222AY224AI226AS228SI230VS232FY234VP236LV238IM240VF242VY244SR2464164-6788hB2AR4,7404,7604,7804,8004,8204,8404,8604,8804,900
ggtctttcaggaggccaaaaggcagctccagaagattgacaaatctgagggccgcttccatgtccagaaccttagccaggtggagcaggatgggcggacggggcatggactccgcagatcttccaagttctgcttgaaggagcacaaagccctcaagacgttaggcatcatcatgccagaaagtcctccggttttccgtcgaggtcttctaactgtttagactcccggcgaaggtacaggtcttggaatcggtccacctcgtcctacccgcctgccccgtacctgaggcgtctagaaggttcaagacgaacttcctcgtgtttcgggagttctgcaatccgtagtagtacEcoNIVF248QE250AK252RQ254LQ256KI258DK260SE262GR264FH266VQ268NL270SQ272VE274QD276GR278TG280HG282LR284RS286SK288FC290LK292EH294KA296LK298TL300GI302IM3044164-6788hB2AR4,9204,9404,9604,9805,0005,0205,0405,060
ggcactttcaccctctgctggctgcccttcttcatcgttaacattgtgcatgtgatccaggataacctcatccgtaaggaagtttacatcctcctaaattggataggctatgtcaattctggtttcaatccccttatctactgccggagcccagatttcaggattgccttccaggccgtgaaagtgggagacgaccgacgggaagaagtagcaattgtaacacgtacactaggtcctattggagtaggcattccttcaaatgtaggaggatttaacctatccgatacagttaagaccaaagttaggggaatagatgacggcctcgggtctaaagtcctaacggaaggtccHpaIGT306FT308LC310WL312PF314FI316VN318IV320HV322IQ324DN326LI328RK330EV332YI334LL336NW338IG340YV342NS344GF346NP348LI350YC352RS354PD356FR358IA360FQ3624164-6788hB2AR5,0805,1005,1205,1405,1605,1805,2005,2205,240
agcttctgtgcctgcgcaggtcttctttgaaggcctatgggaatggctactccagcaacggcaacacaggggagcagagtggatatcacgtggaacaggagaaagaaaataaactgctgtgtgaagacctcccaggcacggaagactttgtgggccatcaaggtactgtgcctagtcgaagacacggacgcgtccagaagaaacttccggatacccttaccgatgaggtcgttgccgttgtgtcccctcgtctcacctatagtgcaccttgtcctctttcttttatttgacgacacacttctggagggtccgtgccttctgaaacacccggtagttccatgacacggatcFspIPmlIStuIEcoRVEL364LC366LR368RS370SL372KA374YG376NG378YS380SN382GN384TG386EQ388SG390YH392VE394QE396KE398NK400LL402CE404DL406PG408TE410DF412VG414HQ416GT418VP420S4164-6788hB2AR5,2605,2805,3005,3205,3405,3605,3805,4005,420
cgataacattgattcacaagggaggaattgtagtacaaatgactcactgctgGCCggtggacgcaccccacccagcctgggtccccaagatgagtcctgcaccaccgccagctcctccctggccaaggacacttcatcgGGTACCGGTGCTTTGCACTTGGATCAAACGCCATCTgctattgtaactaagtgttccctccttaacatcatgtttactgagtgacgacCGGccacctgcgtggggtgggtcggacccaggggttctactcaggacgtggtggcggtcgaggagggaccggttcctgtgaagtagcCCATGGCCACGAAACGTGAACCTAGTTTGCGGTAGAAgeIBsgIKflIKpnIXcmIEcoNIAcc65ID422NI424DS426QG428RN430CS432TN434DS436LL438AG440GR442TP444PS446LG448PQ450DE452SC454TT456AS458SS460LA462KD464TS466SG468TG470AL472HL474DQ476TP478S4164-6788V2 tailhB2ARhADAR2 cat domainhomologhomolog5,4405,4605,4805,5005,5205,5405,5605,5805,600
CGCCAGCCTATTCCCAGTGAGGGTCTTCAGCTGCATTTACCGCAGGTTTTAGCTGACGCTGTCTCACGCCTGGTCCTGGGTAAGTTTGGTGACCTGACCGACAACTTCTCCTCCCCTCACGCTCGCAGAAAAGTGCTGGCTGGAGTCGTCATGACAACAGGCACAGATGTTAAAGGCGGTCGGATAAGGGTCACTCCCAGAAGTCGACGTAAATGGCGTCCAAAATCGACTGCGACAGAGTGCGGACCAGGACCCATTCAAACCACTGGACTGGCTGTTGAAGAGGAGGGGAGTGCGAGCGTCTTTTCACGACCGACCTCAGCAGTACTGTTGTCCGTGTCTACAATTTCBstEIIR480QP482IP484SE486GL488QL490HL492PQ494VL496AD498AV500SR502LV504LG506KF508GD510LT512DN514FS516SP518HA520RR522KV524LA526GV528VM530TT532GT534DV536K4164-6788hADAR2 cat domain5,6205,6405,6605,6805,7005,7205,7405,760
ATGCCAAGGTGATAAGTGTTTCTACAGGAACAAAATGTATTAATGGTGAATACATGAGTGATCGTGGCCTTGCATTAAATGACTGCCATGCAGAAATAATATCTCGGAGATCCTTGCTCAGATTTCTTTATACACAACTTGAGCTTTACTTAAATAACAAAGATGATCAAAAAAGTACGGTTCCACTATTCACAAAGATGTCCTTGTTTTACATAATTACCACTTATGTACTCACTAGCACCGGAACGTAATTTACTGACGGTACGTCTTTATTATAGAGCCTCTAGGAACGAGTCTAAAGAAATATGTGTTGAACTCGAAATGAATTTATTGTTTCTACTAGTTTTTTCD538AK540VI542SV544ST546GT548KC550IN552GE554YM556SD558RG560LA562LN564DC566HA568EI570IS572RR574SL576LR578FL580YT582QL584EL586YL588NN590KD592DQ594KR5964164-6788hADAR2 cat domain5,7805,8005,8205,8405,8605,8805,9005,9205,940
ATCCATCTTTCAGAAATCAGAGCGAGGGGGGTTTAGGCTGAAGGAGAATGTCCAGTTTCATCTGTACATCAGCACCTCTCCCTGTGGAGATGCCAGAATCTTCTCACCACATGAGCCAATCCTGGAAGAACCAGCAGATAGACACCCAAATCGTAAAGCAAGAGGACAGCTACGGTAGGTAGAAAGTCTTTAGTCTCGCTCCCCCCAAATCCGACTTCCTCTTACAGGTCAAAGTAGACATGTAGTCGTGGAGAGGGACACCTCTACGGTCTTAGAAGAGTGGTGTACTCGGTTAGGACCTTCTTGGTCGTCTATCTGTGGGTTTAGCATTTCGTTCTCCTGTCGATGCCBsrGISI598FQ600KS602ER604GG606FR608LK610EN612VQ614FH616LY618IS620TS622PC624GD626AR628IF630SP632HE634PI636LE638EP640AD642RH644PN646RK648AR650GQ652LR6544164-6788hADAR2 cat domain5,9605,9806,0006,0206,0406,0606,0806,1006,120
ACCAAAATAGAGTCTGGTCAGGGGACGATTCCAGTGCGCTCCAATGCGAGCATCCAAGCGTGGGACGGGGTGCTGCAAGGGGAGCGGCTGCTCACCATGTCCTGCAGTGACAAGATTGCACGCTGGAACGTGGTGGGCATCCAGGGATCCCTGCTCAGCATTTTCGTGGAGCCCATGGTTTTATCTCAGACCAGTCCCCTGCTAAGGTCACGCGAGGTTACGCTCGTAGGTTCGCACCCTGCCCCACGACGTTCCCCTCGCCGACGAGTGGTACAGGACGTCACTGTTCTAACGTGCGACCTTGCACCACCCGTAGGTCCCTAGGGACGAGTCGTAAAAGCACCTCGGGTBlpIBamHITK656IE658SG660QG662TI664PV666RS668NA670SI672QA674WD676GV678LQ680GE682RL684LT686MS688CS690DK692IA694RW696NV698VG700IQ702GS704LL706SI708FV710EP7124164-6788hADAR2 cat domain6,1406,1606,1806,2006,2206,2406,2606,2806,300
TTTACTTCTCGAGCATCATCCTGGGCAGCCTTTACCACGGGGACCACCTTTCCAGGGCCATGTACCAGCGGATCTCCAACATAGAGGACCTGCCACCTCTCTACACCCTCAACAAGCCTTTGCTCAGTGGCATCAGCAATGCAGAAGCACGGCAGCCAGGGAAGGCCCCCAACTTAAATGAAGAGCTCGTAGTAGGACCCGTCGGAAATGGTGCCCCTGGTGGAAAGGTCCCGGTACATGGTCGCCTAGAGGTTGTATCTCCTGGACGGTGGAGAGATGTGGGAGTTGTTCGGAAACGAGTCACCGTAGTCGTTACGTCTTCGTGCCGTCGGTCCCTTCCGGGGGTTGAATliIXhoIPaeR7IIY714FS716SI718IL720GS722LY724HG726DH728LS730RA732MY734QR736IS738NI740ED742LP744PL746YT748LN750KP752LL754SG756IS758NA760EA762RQ764PG766KA768PN770F4164-6788hADAR2 cat domain6,3206,3406,3606,3806,4006,4206,4406,460
CAGTGTCAACTGGACGGTAGGCGACTCCGCTATTGAGGTCATCAACGCCACGACTGGGAAGGATGAGCTGGGCCGCGCGTCCCGCCTGTGTAAGCACGCGTTGTACTGTCGCTGGATGCGTGTGCACGGCAAGGTTCCCTCCCACTTACTACGCTCCAAGATTACCAAACCCAACGTCACAGTTGACCTGCCATCCGCTGAGGCGATAACTCCAGTAGTTGCGGTGCTGACCCTTCCTACTCGACCCGGCGCGCAGGGCGGACACATTCGTGCGCAACATGACAGCGACCTACGCACACGTGCCGTTCCAAGGGAGGGTGAATGATGCGAGGTTCTAATGGTTTGGGTTGMluIS772VN774WT776VG778DS780AI782EV784IN786AT788TG790KD792EL794GR796AS798RL800CK802HA804LY806CR808WM810RV812HG814KV816PS818HL820LR822SK824IT826KP828N4164-6788hADAR2 cat domain6,4806,5006,5206,5406,5606,5806,6006,6206,640
GTGTACCATGAGTCCAAGCTGGCGGCAAAGGAGTACCAGGCCGCCAAGGCGCGTCTGTTCACAGCCTTCATCAAGGCGGGGCTGGGGGCCTGGGTGGAGAAGCCCACCGAGCAGGACCAGTTCTCACTCACGCCCtgagccgctcgaggagggcccgaacaaaaactcatctcagCACATGGTACTCAGGTTCGACCGCCGTTTCCTCATGGTCCGGCGGTTCCGCGCAGACAAGTGTCGGAAGTAGTTCCGCCCCGACCCCCGGACCCACCTCTTCGGGTGGCTCGTCCTGGTCAAGAGTGAGTGCGGGactcggcgagctcctcccgggcttgtttttgagtagagtcApaITliIXhoIPspXIPaeR7IPspOMI*1V830YH832ES834KL836AA838KE840YQ842AA844KA846RL848FT850AF852IK854AG856LG858AW860VE862KP864TE866QD868QF870SL872TP874*4164-6788hADAR2 cat domainc-myc epitope6,6606,6806,7006,7206,7406,7606,7806,8006,820
aagaggatctgaatagcgccgtcgaccatcatcatcatcatcattgagtttaaacccgctgatcagcctcgactgtgccttctagttgccagccatctgttgtttgcccctcccccgtgccttccttgaccctggaaggtgccactcccactgtcctttcctaataaaatgaggattctcctagacttatcgcggcagctggtagtagtagtagtagtaactcaaatttgggcgactagtcggagctgacacggaagatcaacggtcggtagacaacaaacggggagggggcacggaaggaactgggaccttccacggtgagggtgacaggaaaggattattttactcctPmeIBGH polyadenylation sequencePolyhi...e tagc-my...ope6,8406,8606,8806,9006,9206,9406,9606,9807,000
aattgcatcgcattgtctgagtaggtgtcattctattctggggggtggggtggggcaggacagcaagggggaggattgggaagacaatagcaggcatgctggggatgcggtgggctctatggagatctatcgatgttctggggatgcggtgggctctatggcttctgaggcggaattaacgtagcgtaacagactcatccacagtaagataagaccccccaccccaccccgtcctgtcgttccccctcctaacccttctgttatcgtccgtacgacccctacgccacccgagatacctctagatagctacaagacccctacgccacccgagataccgaagactccgccttClaISphIBspDIBGH polyadenylation sequenceBGH pA7,0207,0407,0607,0807,1007,1207,1407,160
agaaccagctggggctctagggggtatccccacgcgccctgtagcggcgcattaagcgcggcgggtgtggtggttacgcgcagcgtgaccgctacacttgccagcgccctagcgcccgctcctttcgctttcttcccttcctttctcgccacgttcgccggctttccccgtcaagtcttggtcgaccccgagatcccccataggggtgcgcgggacatcgccgcgtaattcgcgccgcccacaccaccaatgcgcgtcgcactggcgatgtgaacggtcgcgggatcgcgggcgaggaaagcgaaagaagggaaggaaagagcggtgcaagcggccgaaaggggcagttcNaeINgoMIV7,1807,2007,2207,2407,2607,2807,3007,3207,340
ctctaaatcgggggtccctttagggttccgatttagtgctttacggcacctcgaccccaaaaaacttgattagggtgatggttcacgtacctagaagttcctattccgaagttcctattctctagaaagtataggaacttccttggccaaaaagcctgaactcaccgcgacgtctgagatttagcccccagggaaatcccaaggctaaatcacgaaatgccgtggagctggggttttttgaactaatcccactaccaagtgcatggatcttcaaggataaggcttcaaggataagagatctttcatatccttgaaggaaccggtttttcggacttgagtggcgctgcagaBarIKflIXbaIPshAIFRTHygromycin7,3607,3807,4007,4207,4407,4607,4807,5007,520
gtcgagaagtttctgatcgaaaagttcgacagcgtctccgacctgatgcagctctcggagggcgaagaatctcgtgctttcagcttcgatgtaggagggcgtggatatgtcctgcgggtaaatagctgcgccgatggtttctacaaagatcgttatgtttatcggcactttgcatcagctcttcaaagactagcttttcaagctgtcgcagaggctggactacgtcgagagcctcccgcttcttagagcacgaaagtcgaagctacatcctcccgcacctatacaggacgcccatttatcgacgcggctaccaaagatgtttctagcaatacaaatagccgtgaaacgtaBsmBIEsp3IHygromycin7,5407,5607,5807,6007,6207,6407,6607,6807,700
cggccgcgctcccgattccggaagtgcttgacattggggaattcagcgagagcctgacctattgcatctcccgccgtgcacagggtgtcacgttgcaagagccggcgcgagggctaaggccttcacgaactgtaaccccttaagtcgctctcggactggataacgtagagggcggcacgtgtcccacagtgcaacgttctEcoRIDraIIIHygromycin7,7207,7407,7607,7807,800
  • Plasmid
Editing disabled on read-only sequence.
7800 bp5500600065007000750050010001500pUC oriNew Stop6786-67884164-6788M13-48REV Genewiz (DNA)pUCoriR (DNA)EKo152.2 (DNA)XZp023.1 (DNA)EKbF (DNA)EKo272.2 (DNA)XZp077.1 (DNA)EKo271.3 (DNA)EKo330.4 (DNA)pNSK053 (DNA)pNK018 (DNA)EKo326.3 (DNA)Hygromycin,BstAPI,NcoI,AsiSI,PvuI,RsrII,NdeI,NmeAIII,BstAPI,DraIIIAjuI,SacIIHyg_F (DNA)ScaISV40PA_R (DNA),NgoMIV,NaeI,PsiISV40 pA,SV40pA-R Genewiz (DNA),BsmI,BstZ17IM13R Genewiz (DNA)pUCori5F (DNA),BspQI,SapIPciIEKo542.3 (DNA)XZp018test (DNA)XZp018.1 (DNA)XZp004.3 (DNA),BsrGIEKo361.1 (DNA)hADAR2 cat domain,E488Q,T501A,XZp018.2 (DNA),+2XZp053.1 (DNA)BamHIBlpIXZp030.1 (DNA),EKo455.2 (DNA),XZp018.4 (DNA),+4MluIXZp053.2 (DNA),EKo330.5 (DNA),EKbR (DNA),PaeR7I,PspXI,+4c-myc epitope,Polyhistidine tag,cya,ToFlpR (DNA),+3BGH polyadenylation sequence,XZ41-test-R1 (DNA),BghR1 (DNA)bghF (DNA),SphI,BspDI,ClaIBGH pA,EKo293.3 (DNA),FlpInR (DNA)FRT,FrtF (DNA),EKo299.3 (DNA),NgoMIV,NaeI,KflI,XbaIEKo152.1 (DNA),BarI,PshAI,BsmBI,Esp3I,EcoRI,DraIII

Welcome to Benchling!

Sign in to view data.

New digest

Saved digests

Enzyme AatII
Enzyme lists
Cut sites visible on maps
Find enzyme
Name Cuts
Selected Color
Show enzymes that cut

Primers

History

Lineage

 Show Full History
Change User Timestamp

Sequence Alignments

Saved Alignments

Sequence Info

Tags

Name
Parent Version
Folder
Topology
Start Index
Locked
Created
--
Length
--
Export Data
Split Workspace
Bases
7800