Welcome to Benchling!

You're looking at a DNA Sequence. Here are some things you can do with it:

Create an alignment

  1. Create alignments with both DNA and AA sequences.
  2. Bulk-align multiple sequences at once.
  3. Powerful visualization tool to inspect alignments in detail.

Design a primer

Create a translation

Design a CRISPR guide

Assemble and transform a sequence

Benchling is actively tested against the latest versions of Chrome, Firefox, Safari, and Edge. **It doesn't look like your current browser is supported** - for more information, [click here](/browsers).
Monospace normal
Monospace bold
working...
Advanced Settings
pUFR80-RSc0818KO
  • Sequence Map
Editing disabled on read-only sequence.
AAACTCACCGAGGCAGTTCCATAGGATGGCAAGATCCTGGTATCGGTCTGCGATTCCGACTCGTCCAACATCAATACAACCTATTAATTTCCCCTCGTCAAAAATAAGGTTATCAAGTGAGAAATCACCATGAGTGACGACTGAATCCGGTGAGAATGGCAAAAGTTTATGCATTTTTGAGTGGCTCCGTCAAGGTATCCTACCGTTCTAGGACCATAGCCAGACGCTAAGGCTGAGCAGGTTGTAGTTATGTTGGATAATTAAAGGGGAGCAGTTTTTATTCCAATAGTTCACTCTTTAGTGGTACTCACTGCTGACTTAGGCCACTCTTACCGTTTTCAAATACGTAANsiIKanR20406080100120140160
TCTTTCCAGACTTGTTCAACAGGCCAGCCATTACGCTCGTCATCAAAATCACTCGCATCAACCAAACCGTTATTCATTCGTGATTGCGCCTGAGCGAGACGAAATACGCGATCGCTGTTAAAAGGACAATTACAAACAGGAATCGAATGCAACCGGCGCAGGAACACTGCCAGCGAGAAAGGTCTGAACAAGTTGTCCGGTCGGTAATGCGAGCAGTAGTTTTAGTGAGCGTAGTTGGTTTGGCAATAAGTAAGCACTAACGCGGACTCGCTCTGCTTTATGCGCTAGCGACAATTTTCCTGTTAATGTTTGTCCTTAGCTTACGTTGGCCGCGTCCTTGTGACGGTCGCAjuIAsiSIKanR180200220240260280300320340
CATCAACAATATTTTCACCTGAATCAGGATATTCTTCTAATACCTGGAATGCTGTTTTTCCGGGGATCGCAGTGGTGAGTAACCATGCATCATCAGGAGTACGGATAAAATGCTTGATGGTCGGAAGAGGCATAAATTCCGTCAGCCAGTTTAGTCTGACCATCTCATCTGTAACGTAGTTGTTATAAAAGTGGACTTAGTCCTATAAGAAGATTATGGACCTTACGACAAAAAGGCCCCTAGCGTCACCACTCATTGGTACGTAGTAGTCCTCATGCCTATTTTACGAACTACCAGCCTTCTCCGTATTTAAGGCAGTCGGTCAAATCAGACTGGTAGAGTAGACATTGNsiIEcoNIKanR360380400420440460480500520
ATCATTGGCAACGCTACCTTTGCCATGTTTCAGAAACAACTCTGGCGCATCGGGCTTCCCATACAATCGATAGATTGTCGCACCTGATTGCCCGACATTATCGCGAGCCCATTTATACCCATATAAATCAGCATCCATGTTGGAATTTAATCGCGGCCTCGAGCAAGACGTTTCCTAGTAACCGTTGCGATGGAAACGGTACAAAGTCTTTGTTGAGACCGCGTAGCCCGAAGGGTATGTTAGCTATCTAACAGCGTGGACTAACGGGCTGTAATAGCGCTCGGGTAAATATGGGTATATTTAGTCGTAGGTACAACCTTAAATTAGCGCCGGAGCTCGTTCTGCAAAGGNruITliIXhoIPspXIPaeR7IKanR540560580600620640660680700
CGTTGAATATGGCTCATAACACCCCTTGTATTACTGTTTATGTAAGCAGACAGTTTTATTGTTCATGATGATATATTTTTATCTTGTGCAATGTAACATCAGAGATTTTGAGACACAATTCATCGATGATGGTTGAGATGTGTATAAGAGACAGCCCTCCCGGAGACGGTCACAGGCAACTTATACCGAGTATTGTGGGGAACATAATGACAAATACATTCGTCTGTCAAAATAACAAGTACTACTATATAAAAATAGAACACGTTACATTGTAGTCTCTAAAACTCTGTGTTAAGTAGCTACTACCAACTCTACACATATTCTCTGTCGGGAGGGCCTCTGCCAGTGTCPfoIKanR720740760780800820840860
CTTGTCTGTAAGCGGATGCCGGGAGCAGACAAGCCCGTCAGGGCGCGTCAGCGGGTGTTGGCGGGTGTCGGGGCTGGCTTAACTATGCGGCATCAGAGCAGATTGTACTGAGAGTGCACCATAAAATTGTAAACGTTAATATTTTGTTAAAATTCGCGTTAAATTTTTGTTAAATGAACAGACATTCGCCTACGGCCCTCGTCTGTTCGGGCAGTCCCGCGCAGTCGCCCACAACCGCCCACAGCCCCGACCGAATTGATACGCCGTAGTCTCGTCTAACATGACTCTCACGTGGTATTTTAACATTTGCAATTATAAAACAATTTTAAGCGCAATTTAAAAACAATTTAApaLI8809009209409609801,0001,0201,040
CAGCTCATTTTTTAACCAATAGGCCGAAATCGGCAAAATCCCTTATAAATCAAAAGAATAGCCCGAGATAGGGTTGAGTGTTGTTCCAGTTTGGAACAAGAGTCCACTATTAAAGAACGTGGACTCCAACGTCAAAGGGCGAAAAACCGTCTATCAGGGCGATGGCCCACTACACGTCGAGTAAAAAATTGGTTATCCGGCTTTAGCCGTTTTAGGGAATATTTAGTTTTCTTATCGGGCTCTATCCCAACTCACAACAAGGTCAAACCTTGTTCTCAGGTGATAATTTCTTGCACCTGAGGTTGCAGTTTCCCGCTTTTTGGCAGATAGTCCCGCTACCGGGTGATGTGAloIPsiI1,0601,0801,1001,1201,1401,1601,1801,2001,220
TACGTGAAATGAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCCCATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGATTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTATCAAACAAAAGAGGAATGCACTTTACTCTATAATACTATAAAAGACTTAACACTAATTTTTCCGTTGAAATACGGGTACGTTGTCTTTGATATTTTTTATGTCTCTTACTTTTCTTTGTCTATCTAAAAAATCAAGAAATCCGGGCATCAGACGTTTAGGAAAATACTAAAAGATAGTTTGTTTTCTCCTDraIIIsacB1,2401,2601,2801,3001,3201,3401,3601,3801,400
AAATAGACCAGTTGCAATCCAAACGAGAGTCTAATAGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGGCAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCTTACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTTTTATCTGGTCAACGTTAGGTTTGCTCTCAGATTATCTTACTCCAGCTTTTCATTTAGCGCGCCCAAACAATGACTATTTCGTCCGTTCTGGATTTTACACATTTCCCGTTTCACATATGAAACCGCAGTGGGGAATGTATAAAATCCAGAAAAAAATAACACGCATTGATTGAABstZ17IsacB1,4201,4401,4601,4801,5001,5201,5401,560
GCCATCTTCAAACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGAGACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAACCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAAGAAACGAACCAAAAGCGGTAGAAGTTTGTCCTCCCGACCTTCTTCGTCTGGCGATTGTGTCATGTATTTTTTCCTCTGTACTTGCTACTTGTAGTTTTTCAAACGTTTTGTTCGTTGTCATAATTGGAAATGATGGCGTGACGACCGTCCTCCGCGTTGAGTTCGCAAACGCTTTCTTTGCTTGGTTTTCsacB1,5801,6001,6201,6401,6601,6801,7001,7201,740
CCATATAAGGAAACATACGGCATTTCCCATATTACACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATCAAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAAGGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACGCTGGGTATATTCCTTTGTATGCCGTAAAGGGTATAATGTGCGGTACTATACGACGTTTAGGGACTTGTCGTTTTTTTACTTTTTATAGTTCAAGGACTCAAGCTAAGCAGGTGTTAATTTTTATAGAGAAGACGTTTTCCGGACCTGCAAACCCTGTCGACCGGTAATGTTTTGCGACStuIsacB1,7601,7801,8001,8201,8401,8601,8801,9001,920
ACGGCACTGTCGCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCGGAGATCCTAAAAATGCGGATGACACATCGATTTACATGTTCTATCAAAAAGTCGGCGAAACTTCTATTGACAGCTGGAAAAACGCTGGCCGCGTCTTTAAAGACAGCGACAAATTCGATGCAAATGCCGTGACAGCGTTTGATAGTGCCGATGGTGTAGCAGAAACGTAATCGGCCTCTAGGATTTTTACGCCTACTGTGTAGCTAAATGTACAAGATAGTTTTTCAGCCGCTTTGAAGATAACTGTCGACCTTTTTGCGACCGGCGCAGAAATTTCTGTCGCTGTTTAAGCTACGTTTPciIsacB1,9401,9601,9802,0002,0202,0402,0602,0802,100
TGATTCTATCCTAAAAGACCAAACACAAGAATGGTCAGGTTCAGCCACATTTACATCTGACGGAAAAATCCGTTTATTCTACACTGATTTCTCCGGTAAACATTACGGCAAACAAACACTGACAACTGCACAAGTTAACGTATCAGCATCAGACAGCTCTTTGAACATCAACGGTACTAAGATAGGATTTTCTGGTTTGTGTTCTTACCAGTCCAAGTCGGTGTAAATGTAGACTGCCTTTTTAGGCAAATAAGATGTGACTAAAGAGGCCATTTGTAATGCCGTTTGTTTGTGACTGTTGACGTGTTCAATTGCATAGTCGTAGTCTGTCGAGAAACTTGTAGTTGCCAHpaIsacB2,1202,1402,1602,1802,2002,2202,2402,260
GTAGAGGATTATAAATCAATCTTTGACGGTGACGGAAAAACGTATCAAAATGTACAGCAGTTCATCGATGAAGGCAACTACAGCTCAGGCGACAACCATACGCTGAGAGATCCTCACTACGTAGAAGATAAAGGCCACAAATACTTAGTATTTGAAGCAAACACTGGAACTGAAGCATCTCCTAATATTTAGTTAGAAACTGCCACTGCCTTTTTGCATAGTTTTACATGTCGTCAAGTAGCTACTTCCGTTGATGTCGAGTCCGCTGTTGGTATGCGACTCTCTAGGAGTGATGCATCTTCTATTTCCGGTGTTTATGAATCATAAACTTCGTTTGTGACCTTGACTTCPsiIBsrGISnaBIsacB2,2802,3002,3202,3402,3602,3802,4002,4202,440
ATGGCTACCAAGGCGAAGAATCTTTATTTAACAAAGCATACTATGGCAAAAGCACATCATTCTTCCGTCAAGAAAGTCAAAAACTTCTGCAAAGCGATAAAAAACGCACGGCTGAGTTAGCAAACGGCGCTCTCGGTATGATTGAGCTAAACGATGATTACACACTGAAAAAAGTTACCGATGGTTCCGCTTCTTAGAAATAAATTGTTTCGTATGATACCGTTTTCGTGTAGTAAGAAGGCAGTTCTTTCAGTTTTTGAAGACGTTTCGCTATTTTTTGCGTGCCGACTCAATCGTTTGCCGCGAGAGCCATACTAACTCGATTTGCTACTAATGTGTGACTTTTTTCAsacB2,4602,4802,5002,5202,5402,5602,5802,6002,620
GATGAAACCGCTGATTGCATCTAACACAGTAACAGATGAAATTGAACGCGCGAACGTCTTTAAAATGAACGGCAAATGGTATCTGTTCACTGACTCCCGCGGATCAAAAATGACGATTGACGGCATTACGTCTAACGATATTTACATGCTTGGTTATGTTTCTAATTCTTTAACTCTACTTTGGCGACTAACGTAGATTGTGTCATTGTCTACTTTAACTTGCGCGCTTGCAGAAATTTTACTTGCCGTTTACCATAGACAAGTGACTGAGGGCGCCTAGTTTTTACTGCTAACTGCCGTAATGCAGATTGCTATAAATGTACGAACCAATACAAAGATTAAGAAATTGAsacB2,6402,6602,6802,7002,7202,7402,7602,7802,800
GGCCCATACAAGCCGCTGAACAAAACTGGCCTTGTGTTAAAAATGGATCTTGATCCTAACGATGTAACCTTTACTTACTCACACTTCGCTGTACCTCAAGCGAAAGGAAACAATGTCGTGATTACAAGCTATATGACAAACAGAGGATTCTACGCAGACAAACAATCAACGTTTGCCGGGTATGTTCGGCGACTTGTTTTGACCGGAACACAATTTTTACCTAGAACTAGGATTGCTACATTGGAAATGAATGAGTGTGAAGCGACATGGAGTTCGCTTTCCTTTGTTACAGCACTAATGTTCGATATACTGTTTGTCTCCTAAGATGCGTCTGTTTGTTAGTTGCAAACsacB2,8202,8402,8602,8802,9002,9202,9402,960
CGCCTAGCTTCCTGCTGAACATCAAAGGCAAGAAAACATCTGTTGTCAAAGACAGCATCCTTGAACAAGGACAATTAACAGTTAACAAATAAAAACGCAAAAGAAAATGCCGATATCCTATTGGCATTTTCTTTTATTTCTTATCAACATAAAGGTGAATCCCATATGAACTATAGCGGATCGAAGGACGACTTGTAGTTTCCGTTCTTTTGTAGACAACAGTTTCTGTCGTAGGAACTTGTTCCTGTTAATTGTCAATTGTTTATTTTTGCGTTTTCTTTTACGGCTATAGGATAACCGTAAAAGAAAATAAAGAATAGTTGTATTTCCACTTAGGGTATACTTGATATHpaINdeIEcoRVsacB2,9803,0003,0203,0403,0603,0803,1003,1203,140
TAAAAGCAGGCAAATGGCTAACCGTATTCCTAACCTTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTAATTTTCGTCCGTTTACCGATTGGCATAAGGATTGGAAAACCATTACTGAGGTTGAATAACTATCACAAAATACAAGTCTATTACGGGCTACTGAAACAGTACGTCGAGGTGGCTAAAACTCTTGCTGTCGCTGAAGGCAGGGTCGGCACGGTCCACGACGGAGTCTAAGTCCAATCspCIPflFIPshAITth111I3,1603,1803,2003,2203,2403,2603,2803,3003,320
TGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACTACGTGAACCATCACCCAAATCAAGTTTTTTGGGGTCGAGGTGCCGTAAAGCACTAAATCGGAACCCTAAAGGGAGCACGGCGAGTTAAGCGACGCATATAGCGAACGACTAATGCACGTCGAAAGGGAAGTCCGCCCTAAGTATGTCGCCGGTCGGTAGGCAGTAGGTATAGTGATGCACTTGGTAGTGGGTTTAGTTCAAAAAACCCCAGCTCCACGGCATTTCGTGATTTAGCCTTGGGATTTCCCTCGDraIII3,3403,3603,3803,4003,4203,4403,4603,4803,500
CCCCGATTTAGAGCTTGACGGGGAAAGCCGGCGAACGTGGCGAGAAAGGAAGGGAAGAAAGCGAAAGGAGCGGGCGCTAGGGCGCTGGCAAGTGTAGCGGTCACGCTGCGCGTAACCACCACACCCGCCGCGCTTAATGCGCCGCTACAGGGCGCGTACTATGGTTGCTTTGACGGGGGCTAAATCTCGAACTGCCCCTTTCGGCCGCTTGCACCGCTCTTTCCTTCCCTTCTTTCGCTTTCCTCGCCCGCGATCCCGCGACCGTTCACATCGCCAGTGCGACGCGCATTGGTGGTGTGGGCGGCGCGAATTACGCGGCGATGTCCCGCGCATGATACCAACGAAACTGC3,5203,5403,5603,5803,6003,6203,6403,660
TATGCGGTGTGAAATACCGCACAGATGCGTAAGGAGAAAATACCGCATCAGGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTAACGCCAGGGATACGCCACACTTTATGGCGTGTCTACGCATTCCTCTTTTATGGCGTAGTCCGCGGTAAGCGGTAAGTCCGACGCGTTGACAACCCTTCCCGCTAGCCACGCCCGGAGAAGCGATAATGCGGTCGACCGCTTTCCCCCTACACGACGTTCCGCTAATTCAACCCATTGCGGTCCCFspIKasINarISfoIPluTIlacZ_a3,6803,7003,7203,7403,7603,7803,8003,8203,840
TTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGCCAAGAGCTACTCGCCGCTGTTCAATTCGTCCACGCCTGAGACGGTTCGGCAGGACCGCAAGGATGCCCTGCACCGGCAGTACGCGCTGGTGGAGCAGCACCTGGCGGCCCATCCCTGGCTGCTGGGCGAACGTTTCTAAAAGGGTCAGTGCTGCAACATTTTGCTGCCGGTCACGGTTCTCGATGAGCGGCGACAAGTTAAGCAGGTGCGGACTCTGCCAAGCCGTCCTGGCGTTCCTACGGGACGTGGCCGTCATGCGCGACCACCTCGTCGTGGACCGCCGGGTAGGGACCGACGACCCGCTTGCAAAGABmrIRSc0818uplacZ_a3,8603,8803,9003,9203,9403,9603,9804,0004,020
CGGCGGCAGACGCCTATCTGTTCACGGTCACCAACTGGGCCGGGCATGTGGGCCTCGACCTGTCGGCATTCACGGCGCTGGCCGCATTCCAGCAGCGCGTCGCGTCACGGCCGGCCGTGCTGGCTGCGCTGGAGGCCGAGGGGCTGTTGAGCGAGGCGGAGGCGTAAGGCAGAAAGCCGCCGTCTGCGGATAGACAAGTGCCAGTGGTTGACCCGGCCCGTACACCCGGAGCTGGACAGCCGTAAGTGCCGCGACCGGCGTAAGGTCGTCGCGCAGCGCAGTGCCGGCCGGCACGACCGACGCGACCTCCGGCTCCCCGACAACTCGCTCCGCCTCCGCATTCCGTCTTTBmrIBpmIFseIBstEIIRSc0818up4,0404,0604,0804,1004,1204,1404,1604,1804,200
CGTTGTCAGCAACAATGCGCCAATCAGAAACCGGGCTTTCGAGCCCGGTTTTTTTTACCGGGATTCGGCAGCCGATTCGACACTCGAATGCTGCGTCATGGCCCGGGTGTCATGGAGCTGAACCTGCCAATGTCCGGCGACCCTGGGGACCGCGGGCTAATGCGGTCCGGTGGGTGCAACAGTCGTTGTTACGCGGTTAGTCTTTGGCCCGAAAGCTCGGGCCAAAAAAAATGGCCCTAAGCCGTCGGCTAAGCTGTGAGCTTACGACGCAGTACCGGGCCCACAGTACCTCGACTTGGACGGTTACAGGCCGCTGGGACCCCTGGCGCCCGATTACGCCAGGCCACCCAPasISmaIXmaIRsrIITspMIRSc0818upRho-indep. term.4,2204,2404,2604,2804,3004,3204,3404,360
CGATCGACTGGTCAGGAACGACGCCGCTGACCAGTGGTGACTGTCTCTTCCGCTTGTCGTCCGTGGTCGGCGCTGTTGATTCAATACGGATCAAATTACAAAAATTGGAGCAATGATTGCAAATCGATTCGATGCCGATTTTTAAACTTCATGTCGAAAATATTCTGGTCTATGGGCTAGCTGACCAGTCCTTGCTGCGGCGACTGGTCACCACTGACAGAGAAGGCGAACAGCAGGCACCAGCCGCGACAACTAAGTTATGCCTAGTTTAATGTTTTTAACCTCGTTACTAACGTTTAGCTAAGCTACGGCTAAAAATTTGAAGTACAGCTTTTATAAGACCAGATACCXmnIRSc0818up4,3804,4004,4204,4404,4604,4804,5004,5204,540
TGAATAGCCTTTCCACGCTCAATGCAGGAGGTGCGACATGCCATGTTTGAAGAAATGGCGATGGATTGCGGTCGCGGTGGTGGGTGATCAGGGCTCGCCCGCGAGCTGCCGATGGATGTCCATGCGATCGAAGTGCGCTCGCTTCTCGATGATCTTCCCATCCGAGATCGTCAGCACTTATCGGAAAGGTGCGAGTTACGTCCTCCACGCTGTACGGTACAAACTTCTTTACCGCTACCTAACGCCAGCGCCACCACCCACTAGTCCCGAGCGGGCGCTCGACGGCTACCTACAGGTACGCTAGCTTCACGCGAGCGAAGAGCTACTAGAAGGGTAGGCTCTAGCAGTCGBclIRSc0818 dwnRsc0819RSc0818up4,5604,5804,6004,6204,6404,6604,6804,7004,720
AGCATCAGCAGCGAAAAGCGCAGGCGCTTGCCCGCAGGGGCGATGCCATCGATCACGCCGCTCTTGTGTTCGCCGTCGAAGACCAGGTAGGCGGCCACCTGATCACCCTCGGCGACCATCCGCTCGATTTGGAAGCTGAAGCCCGGAAACGCCGGAAAGGTTCTGTACCGATCAGTCGTAGTCGTCGCTTTTCGCGTCCGCGAACGGGCGTCCCCGCTACGGTAGCTAGTGCGGCGAGAACACAAGCGGCAGCTTCTGGTCCATCCGCCGGTGGACTAGTGGGAGCCGCTGGTAGGCGAGCTAAACCTTCGACTTCGGGCCTTTGCGGCCTTTCCAAGACATGGCTAGTCBbsIBclISexAIRSc0818 dwnRsc08194,7404,7604,7804,8004,8204,8404,8604,8804,900
TCCTGAACGTCAAGGCGTGCGGAGATCCCGTAGCGAATAGGTTGCCTGGCCGTGATGGCCTCGGCTCCCGAACGGGGTAGATGGCTGACGCGTAATACGCTGGCACCCTCTTCAGCGTGCCGCGCCGGGGCGTTGCCGACACGTTGCCAAGCCCATCGAGCGCACTCTGATGTCAAGGACTTGCAGTTCCGCACGCCTCTAGGGCATCGCTTATCCAACGGACCGGCACTACCGGAGCCGAGGGCTTGCCCCATCTACCGACTGCGCATTATGCGACCGTGGGAGAAGTCGCACGGCGCGGCCCCGCAACGGCTGTGCAACGGTTCGGGTAGCTCGCGTGAGACTACAGTMluISfiIRSc0818 dwnRsc08194,9204,9404,9604,9805,0005,0205,0405,060
ACGCTTCGAGCGGGTTGCCTTCTTCACGGGCACGCGCCCGATTTCAACGGCAGATCTTGCCGCTGGGCGTCGGAAGTACCCCTCCAAAAGCGCAACGACCTCATCGACGAAATCGGGGCGATCGAACAGTTCAGGCTGATGCGAGGCCGCTTCGTGGATGACGGCGTGCGCCGCGTGCGAAGCTCGCCCAACGGAAGAAGTGCCCGTGCGCGGGCTAAAGTTGCCGTCTAGAACGGCGACCCGCAGCCTTCATGGGGAGGTTTTCGCGTTGCTGGAGTAGCTGCTTTAGCCCCGCTAGCTTGTCAAGTCCGACTACGCTCCGGCGAAGCACCTACTGCCGCACGCGGCGCBglIIRSc0818 dwn5,0805,1005,1205,1405,1605,1805,2005,2205,240
ATGCGTGCGATCCGGAGCGCAAAGTGGGGATCGGGCACGTTCTTCATGAAGGGTTGCAGCACTTGCAAAGGCTGGTCGCCGCCGCGACTCTCGTCACCCAGCGGAACCCTTACCGATCGCGGCAACTCCGCATCGATCGCTCGATGAACCGCGGGCGCAACGCGATGCTCATCAATACGCACGCTAGGCCTCGCGTTTCACCCCTAGCCCGTGCAAGAAGTACTTCCCAACGTCGTGAACGTTTCCGACCAGCGGCGGCGCTGAGAGCAGTGGGTCGCCTTGGGAATGGCTAGCGCCGTTGAGGCGTAGCTAGCGAGCTACTTGGCGCCCGCGTTGCGCTACGAGTAGTTBspEIPshAIRSc0818 dwn5,2605,2805,3005,3205,3405,3605,3805,4005,420
TCATCGCGACGACAAGCAGGGTCAGCGCCTCGCGCAGCGAGCGCTGCTCGGAGACTTGCGGAAGCGCCTTTTGCATGCCTGCAGGTCGACTCTAGAGGATCCCCGGGTACCGAGCTCGAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTAGTAGCGCTGCTGTTCGTCCCAGTCGCGGAGCGCGTCGCTCGCGACGAGCCTCTGAACGCCTTCGCGGAAAACGTACGGACGTCCAGCTGAGATCTCCTAGGGGCCCATGGCTCGAGCTTAAGCATTAGTACCAGTATCGACAAAGGACACACTTTAACAATAGGCGAGTGTTAAKpnINruIPstISacISalISbfISmaISphIXbaIXmaIBamHIEcoRITspMIAcc65IEco53kIRSc0818 dwn5,4405,4605,4805,5005,5205,5405,5605,5805,600
CCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGGTGTGTTGTATGCTCGGCCTTCGTATTTCACATTTCGGACCCCACGGATTACTCACTCGATTGAGTGTAATTAACGCAACGCGAGTGACGGGCGAAAGGTCAGCCCTTTGGACAGCACGGTCGACGTAATTACTTAGCCGGTTGCGCGCCCCTCTCCGCCAAACGCATAACCCGlac_promoter5,6205,6405,6605,6805,7005,7205,7405,760
GCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAGCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCCGTAAAAAGGCCGCGTCGAGAAGGCGAAGGAGCGAGTGACTGAGCGACGCGAGCCAGCAAGCCGACGCCGCTCGCCATAGTCGAGTGAGTTTCCGCCATTATGCCAATAGGTGTCTTAGTCCCCTATTGCGTCCTTTCTTGTACACTCGTTTTCCGGTCGTTTTCCGGTCCTTGGGCATTTTTCCGGCGCAPciI5,7805,8005,8205,8405,8605,8805,9005,9205,940
TGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTACGACCGCAAAAAGGTATCCGAGGCGGGGGGACTGCTCGTAGTGTTTTTAGCTGCGAGTTCAGTCTCCACCGCTTTGGGCTGTCCTGATATTTCTATGGTCCGCAAAGGGGGACCTTCGAGGGAGCACGCGAGAGGACAAGGCTGGGACGGCGAATGGCCTATGGACAGGCGGAABciVIBssSIBssSαI5,9605,9806,0006,0206,0406,0606,0806,1006,120
TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGAGAGGGAAGCCCTTCGCACCGCGAAAGAGTATCGAGTGCGACATCCATAGAGTCAAGCCACATCCAGCAAGCGAGGTTCGACCCGACACACGTGCTTGGGGGGCAAGTCGGGCTGGCGACGCGGAATAGGCCATTGATAGCAGAACTCAGGTTGGGCCATTCTGTGCTGAATAGCApaLI6,1406,1606,1806,2006,2206,2406,2606,2806,300
CCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGAACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAGGTGACCGTCGTCGGTGACCATTGTCCTAATCGTCTCGCTCCATACATCCGCCACGATGTCTCAAGAACTTCACCACCGGATTGATGCCGATGTGATCTTCTTGTCATAAACCATAGACGCGAGACGACTTCGGTCAATGGAAGCCTTTTTCTCAACCATCGAGAACTAGGCCGT6,3206,3406,3606,3806,4006,4206,4406,460
AAAAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATCATATCGTCAATTATTACCTCCACGGGGAGAGCCTGAGCAAACTGGCCTCAGGCATTTGAGAAGCACACGGTCACACTGCTTCCGGTAGTCAATAAACCGGTAAACTTTTTTGGTGGCGACCATCGCCACCAAAAAAACAAACGTTCGTCGTCTAATGCGCGTCTTTTTTTCCTAGTATAGCAGTTAATAATGGAGGTGCCCCTCTCGGACTCGTTTGACCGGAGTCCGTAAACTCTTCGTGTGCCAGTGTGACGAAGGCCATCAGTTATTTGGCCATTTGAgeIBsu36I6,4806,5006,5206,5406,5606,5806,6006,6206,640
CAGCAATAGACATAAGCGGCTATTTAACGACCCTGCCCTGAACCGACGACCGGGTCGAATTTGCTTTCGAATTTCTGCCATTCATCCGCTTATTATCACTTATTCAGGCGTAGCAACCAGGCGTTTAAGGGCACCAATAACTGCCTTAAAAAAATTACGCCCCGCCCTGCCACTCGTCGTTATCTGTATTCGCCGATAAATTGCTGGGACGGGACTTGGCTGCTGGCCCAGCTTAAACGAAAGCTTAAAGACGGTAAGTAGGCGAATAATAGTGAATAAGTCCGCATCGTTGGTCCGCAAATTCCCGTGGTTATTGACGGAATTTTTTTAATGCGGGGCGGGACGGTGAGBstBIPflFITth111ICAT/CamR6,6606,6806,7006,7206,7406,7606,7806,8006,820
ATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAATAGCGTCATGACAACATTAAGTAATTCGTAAGACGGCTGTACCTTCGGTAGTGTTTGCCGTACTACTTGGACTTAGCGGTCGCCGTAGTCGTGGAACAGCGGAACGCATATTATAAACGGGTACCACTTTTGCCCCCGCTTCTTCAACAGGTATAACCGGTGCAAATTTAGTTTTNcoIScaICAT/CamR6,8406,8606,8806,9006,9206,9406,9606,9807,000
CTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTGACCACTTTGAGTGGGTCCCTAACCGACTCTGCTTTTTGTATAAGAGTTATTTGGGAAATCCCTTTATCCGGTCCAAAAGTGGCATTGTGCGGTGTAGAACGCTTATATACACATCTTTGACGGCCTTTAGCAGCACCATAAGTGAGGTCTCGCTACTTTTGCAAAGTCAAACGABpmIPasICAT/CamR7,0207,0407,0607,0807,1007,1207,1407,160
CATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGTAATTCCGGATGAGCATTCATCAGGCGGGCAAGAATGTGAATAAAGGCCGGATAAAACTTGTGCTTATTTTTCTTTACGGTCTTTAAAAAGGCCGTAATATCCAGGTACCTTTTGCCACATTGTTCCCACTTGTGATAGGGTATAGTGGTCGAGTGGCAGAAAGTAACGGTATGCATTAAGGCCTACTCGTAAGTAGTCCGCCCGTTCTTACACTTATTTCCGGCCTATTTTGAACACGAATAAAAAGAAATGCCAGAAATTTTTCCGGCATTATAGGTCBspEISnaBICAT/CamR7,1807,2007,2207,2407,2607,2807,3007,3207,340
CTGAACGGTCTGGTTATAGGTACATTGAGCAACTGACTGAAATGCCTCAAAATGTTCTTTACGATGCCATTGGGATATATCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTTAGCTTCCTTAGCTCCTGAAAATCTCGATAACTCAAAAAATACGCCCGGTAGTGATCTTGACTTGCCAGACCAATATCCATGTAACTCGTTGACTGACTTTACGGAGTTTTACAAGAAATGCTACGGTAACCCTATATAGTTGCCACCATATAGGTCACTAAAAAAAGAGGTAAAATCGAAGGAATCGAGGACTTTTAGAGCTATTGAGTTTTTTATGCGGGCCATCACTAGAACAT/CamR7,3607,3807,4007,4207,4407,4607,4807,5007,520
ATTTCATTATGGTGAAAGTTGGAACCTCTTACGTGCCGATCAACGTCTCATTTTCGCCAAAAGTTGGCCAGGGCTTCCCGGTATCAACAGGGACACCAGGATTTATTTATTCTGCGAAGTGATCCATGTGGACGCCGTGCGGCGTCCTGCTCCGAACTACGCGGAGCGGGGCCTGTAAAGTAATACCACTTTCAACCTTGGAGAATGCACGGCTAGTTGCAGAGTAAAAGCGGTTTTCAACCGGTCCCGAAGGGCCATAGTTGTCCCTGTGGTCCTAAATAAATAAGACGCTTCACTAGGTACACCTGCGGCACGCCGCAGGACGAGGCTTGATGCGCCTCGCCCCGGACEcoO109I7,5407,5607,5807,6007,6207,6407,6607,6807,700
TCGGCGTTCCCTGACCGTCTGACGGCAGCGATTGAAGAAGAGCGCTCGGTCTTGCCTTGCTCGTCGGTGATGTACTTCACCAGCTCCGCGAAGTCGCTCTTCTTGATGGAGCGCATGGGGACGTGCTTGGCAATCACGCGCACCCCCCGGCCGTTTTAGCGGCTAAAAAAGTCATAGCCGCAAGGGACTGGCAGACTGCCGTCGCTAACTTCTTCTCGCGAGCCAGAACGGAACGAGCAGCCACTACATGAAGTGGTCGAGGCGCTTCAGCGAGAAGAACTACCTCGCGTACCCCTGCACGAACCGTTAGTGCGCGTGGGGGGCCGGCAAAATCGCCGATTTTTTCAGTA7,7207,7407,7607,7807,8007,8207,8407,860
GGCTCTGCCCTCGGGCGGACCACGCCCATCATGACCTTGCCAAGCTCGTCCTGCTTCTCTTCGATCTTCGCCAGCAGGGCGAGGATCGTGGCATCACCGAACCGCGCCGTGCGCGGGTCGTCGGTGAGCCAGAGTTTCAGCAGGCCGCCCAGGCGGCCCAGGTCGCCATTGATGCCCGAGACGGGAGCCCGCCTGGTGCGGGTAGTACTGGAACGGTTCGAGCAGGACGAAGAGAAGCTAGAAGCGGTCGTCCCGCTCCTAGCACCGTAGTGGCTTGGCGCGGCACGCGCCCAGCAGCCACTCGGTCTCAAAGTCGTCCGGCGGGTCCGCCGGGTCCAGCGGTAACTACG7,8807,9007,9207,9407,9607,9808,0008,0208,040
GGGCCAGCTCGCGGACGTGCTCATAGTCCACGACGCCCGTGATTTTGTAGCCCTGGCCGACGGCCAGCAGGTAGGCCGACAGGCTCATGCCGGCCGCCGCCGCCTTTTCCTCAATCGCTCTTCGTTCGTCTGGAAGGCAGTACACCTTGATAGGTGGGCTGCCCTTCCTGGTTGGCCCGGTCGAGCGCCTGCACGAGTATCAGGTGCTGCGGGCACTAAAACATCGGGACCGGCTGCCGGTCGTCCATCCGGCTGTCCGAGTACGGCCGGCGGCGGCGGAAAAGGAGTTAGCGAGAAGCAAGCAGACCTTCCGTCATGTGGAACTATCCACCCGACGGGAAGGACCAACC8,0608,0808,1008,1208,1408,1608,1808,2008,220
CTTGGTTTCATCAGCCATCCGCTTGCCCTCATCTGTTACGCCGGCGGTAGCCGGCCAGCCTCGCAGAGCAGGATTCCCGTTGAGCACCGCCAGGTGCGAATAAGGGACAGTGAAGAAGGAACACCCGCTCGCGGGTGGGCCTACTTCACCTATCCTGCCCGGCTGACGCCGTTGGGAACCAAAGTAGTCGGTAGGCGAACGGGAGTAGACAATGCGGCCGCCATCGGCCGGTCGGAGCGTCTCGTCCTAAGGGCAACTCGTGGCGGTCCACGCTTATTCCCTGTCACTTCTTCCTTGTGGGCGAGCGCCCACCCGGATGAAGTGGATAGGACGGGCCGACTGCGGCAACCMreIBciVISgrAIoriT_RP48,2408,2608,2808,3008,3208,3408,3608,3808,400
ATACACCAAGGAAAGTCTACACGAACCCTTTGGCAAAATCCTGTATATCGTGCGAAAAAGGATGGATATACCGAAAAAATCGCTATAATGACCCCGAAGCAGGGTTATGCAGCGGAAAAGCGCTGCTTCCCTGCTGTTTTGTGGAATATCTACCGACTGGAAACAGGCAAATGCATATGTGGTTCCTTTCAGATGTGCTTGGGAAACCGTTTTAGGACATATAGCACGCTTTTTCCTACCTATATGGCTTTTTTAGCGATATTACTGGGGCTTCGTCCCAATACGTCGCCTTTTCGCGACGAAGGGACGACAAAACACCTTATAGATGGCTGACCTTTGTCCGTTTACGToriT_RP48,4208,4408,4608,4808,5008,5208,5408,560
GGAAATTACTGAACTGAGGGGACAGGCGAGAGACGATGCCAAAGAGCTACACCGACGAGCTGGCCGAGTGGGTTGAATCCCGCGCGGCCAAGAAGCGCCGGCGTGATGAGGCTGCGGTTGCGTTCCTGGCGGTGAGGGCGGATGTCGAGGCGGCGTTAGCGTCCGGCTATGCGCTCCTTTAATGACTTGACTCCCCTGTCCGCTCTCTGCTACGGTTTCTCGATGTGGCTGCTCGACCGGCTCACCCAACTTAGGGCGCGCCGGTTCTTCGCGGCCGCACTACTCCGACGCCAACGCAAGGACCGCCACTCCCGCCTACAGCTCCGCCGCAATCGCAGGCCGATACGCGAMreISgrAI8,5808,6008,6208,6408,6608,6808,7008,7208,740
CGTCACCATTTGGGAGCACATGCGGGAAACGGGGAAGGTCAAGTTCTCCTACGAGACGTTCCGCTCGCACGCCAGGCGGCACATCAAGGCCAAGCCCGCCGATGTGCCCGCACCGCAGGCCAAGGCTGCGGAACCCGCGCCGGCACCCAAGACGCCGGAGCCACGGCGGCCGAAGGCAGTGGTAAACCCTCGTGTACGCCCTTTGCCCCTTCCAGTTCAAGAGGATGCTCTGCAAGGCGAGCGTGCGGTCCGCCGTGTAGTTCCGGTTCGGGCGGCTACACGGGCGTGGCGTCCGGTTCCGACGCCTTGGGCGCGGCCGTGGGTTCTGCGGCCTCGGTGCCGCCGGCTTCmob(P)8,7608,7808,8008,8208,8408,8608,8808,9008,920
CAGGGGGGCAAGGCTGAAAAGCCGGCCCCCGCTGCGGCCCCGACCGGCTTCACCTTCAACCCAACACCGGACAAAAAGGATCTACTGTAATGGCGAAAATTCACATGGTTTTGCAGGGCAAGGGCGGGGTCGGCAAGTCGGCCATCGCCGCGATCATTGCGCAGTACAAGATGGAGTCCCCCCGTTCCGACTTTTCGGCCGGGGGCGACGCCGGGGCTGGCCGAAGTGGAAGTTGGGTTGTGGCCTGTTTTTCCTAGATGACATTACCGCTTTTAAGTGTACCAAAACGTCCCGTTCCCGCCCCAGCCGTTCAGCCGGTAGCGGCGCTAGTAACGCGTCATGTTCTACCTFspImob(P)8,9408,9608,9809,0009,0209,0409,0609,0809,100
CAAGGGGCAGACACCCTTGTGCATCGACACCGACCCGGTGAACGCGACGTTCGAGGGCTACAAGGCCCTGAACGTCCGCCGGCTGAACATCATGGCCGGCGACGAAATTAACTCGCGCAACTTCGACACCCTGGTCGAGCTGATTGCGCCGACCAAGGATGACGTGGTGATCCCAGTTCCCCGTCTGTGGGAACACGTAGCTGTGGCTGGGCCACTTGCGCTGCAAGCTCCCGATGTTCCGGGACTTGCAGGCGGCCGACTTGTAGTACCGGCCGCTGCTTTAATTGAGCGCGTTGAAGCTGTGGGACCAGCTCGACTAACGCGGCTGGTTCCTACTGCACCACTAGGGTAleIXcmIEcoO109Imob(P)9,1209,1409,1609,1809,2009,2209,2409,260
ACCAATTCTGATTAGAAAAACTCATCGAGCATCAAATGAAACTGCAATTTATTCATATCAGGATTATCAATACCATATTTTTGAAAAAGCCGTTTCTGTAATGAAGGAGATGGTTAAGACTAATCTTTTTGAGTAGCTCGTAGTTTACTTTGACGTTAAATAAGTATAGTCCTAATAGTTATGGTATAAAAACTTTTTCGGCAAAGACATTACTTCCTCTKanR9,2809,3009,3209,3409,3609,380
  • Plasmid
Editing disabled on read-only sequence.
9385 bp70007500800085009000500100015002000sacBRSc0818dwnF (DNA)RSc0818dwnR (DNA)KanResR(RipP1) (DNA)

Welcome to Benchling!

Sign in to view data.

New digest

Saved digests

Enzyme AatII
Enzyme lists
Cut sites visible on maps
Find enzyme
Name Cuts
Selected Color
Show enzymes that cut

Primers

History

Lineage

 Show Full History
Change User Timestamp

Sequence Alignments

Saved Alignments

Sequence Info

Tags

Name
Parent Version
Folder
Topology
Start Index
Locked
Created
--
Length
--
Export Data
Split Workspace
Bases
9385