Welcome to Benchling!

You're looking at a DNA Sequence. Here are some things you can do with it:

Create an alignment

  1. Create alignments with both DNA and AA sequences.
  2. Bulk-align multiple sequences at once.
  3. Powerful visualization tool to inspect alignments in detail.

Design a primer

Create a translation

Design a CRISPR guide

Assemble and transform a sequence

Benchling is actively tested against the latest versions of Chrome, Firefox, Safari, and Edge. **It doesn't look like your current browser is supported** - for more information, [click here](/browsers).
Monospace normal
Monospace bold
working...
Advanced Settings
Logic Node Archetype v5
  • Sequence Map
Editing disabled on read-only sequence.
taccgagctcgaattcactgCACCTGCTTCCCAGTTTGACAACCTCGTTTGNNNNNNNTAAAATNNNNNNNAATTTCTACTGTTGTAGATNNNNNNNTAAAATNNNNNNNHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHAGATCGGAAGAGCACACGTCTGAACatggctcgagcttaagtgacGTGGACGAAGGGTCAAACTGTTGGAGCAAACNNNNNNNATTTTANNNNNNNTTAAAGATGACAACATCTANNNNNNNATTTTANNNNNNNDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDTCTAGCCTTCTCGTGTGCAGACTTGAluIApoIBmrIBpmIBsgIBsrIBtsIDpnIEarIMboISacISapITaqIBanIIBfuAIBfuCIBmgBIBspMIBspQIBtsαIDpnIIEcoRIMboIIPaqCITaqαITscAITspRIAflIIISau3AIBsiHKAIBsiHKAIEco53kIHpy188IHpy188IHpyCH4VBsp1286IBsp1286IBtsIMutIHpyCH4IVHpyCH4IIISlinkerStrong Promoter3prime primerAnnealAnnealpUC19 OverlapInputOutputCpf1-RepeatBinding20406080100120140160
TCCAGTCAAGAATTAACGCAACCCTCCCCGCCCCTGACAGGGCGGGGTTTTTTTTTTCTCGGTACCAAATTCCAGAAAAGAGGCCTCCCGAAAGGGGGGCCTTTTTTCGTTTTGGTCCGCAGTCGAGACCGGTCTCGTGACTATAGCAGGTGgccgtcgttttacaacgtcAGGTCAGTTCTTAATTGCGTTGGGAGGGGCGGGGACTGTCCCGCCCCAAAAAAAAAAGAGCCATGGTTTAAGGTCTTTTCTCCGGAGGGCTTTCCCCCCGGAAAAAAGCAAAACCAGGCGTCAGCTCTGGCCAGAGCACTGATATCGTCCACcggcagcaaaatgttgcagAgeIApoIBanIBsaIBsaIBsrIEaeIFauIKpnIMseIMspIRsaISfcIStuITaqIAvaIIBceAIBcoDIBcoDIBfuAIBsaWIBsmAIBsmAIBspMIBsrFIBssSICviQIHpaIINlaIVNlaIVPaqCITaqαIAcc65IBssSαIHpy99ISau96ISau96ITsp45IEcoO109IHpyCH4IVL3S2P21BBa_B1006 U10BufferpUC19 Overlap180200220240260280300320340
  • Linear Map
Editing disabled on read-only sequence.
Logic Node Archetype v5 (346 bp)AgeIAluIApoIApoIBanIBmrIBpmIBsaIBsaIBsgIBsrIBsrIBtsIDpnIEaeIEarIFauIKpnIMboIMseIMspIRsaISacISapISfcIStuITaqITaqIAvaIIBanIIBceAIBcoDIBcoDIBfuAIBfuAIBfuCIBmgBIBsaWIBsmAIBsmAIBspMIBspMIBspQIBsrFIBssSIBtsαICviQIDpnIIEcoRIHpaIIMboIINlaIVNlaIVPaqCIPaqCITaqαITaqαITscAITspRIAcc65IAflIIIBssSαIHpy99ISau3AISau96ISau96ITsp45IBsiHKAIBsiHKAIEco53kIHpy188IHpy188IHpyCH4VBsp1286IBsp1286IBtsIMutIEcoO109IHpyCH4IVHpyCH4IVHpyCH4III50100150200250300SlinkerL3S2P21Strong...moter3prim...imerBBa_B... U10AnnealAnnealpU...pInputOu...tCp...tpU...pInput1Rev (DNA)Input2Rev (DNA)Input0Rev (DNA)Output2For (DNA)Output1For (DNA)Output0For (DNA)Logic Node Archetype v5 (346 bp)

Welcome to Benchling!

Sign in to view data.

New digest

Saved digests

Enzyme AatII
Enzyme lists
Cut sites visible on maps
Find enzyme
Name Cuts
Selected Color
Show enzymes that cut

Primers

Version history

 Show full history
Change User Timestamp

Sequence Alignments

Saved alignments

Sequence Info

Tags

Name
Parent version
Folder
Topology
Start index
Locked
Created
--
Length
--
Export data
Split Workspace
Bases
346