Welcome to Benchling!

You're looking at a DNA Sequence. Here are some things you can do with it:

Create an alignment

  1. Create alignments with both DNA and AA sequences.
  2. Bulk-align multiple sequences at once.
  3. Powerful visualization tool to inspect alignments in detail.

Design a primer

Create a translation

Design a CRISPR guide

Assemble and transform a sequence

Benchling is actively tested against the latest versions of Chrome, Firefox, Safari, and Edge. **It doesn't look like your current browser is supported** - for more information, [click here](/browsers).
Monospace normal
Monospace bold
working...
Advanced Settings
pAAV-nEF-ConFoff 2.0-hChR2(H134R)-mCherry-WPRE
  • Sequence Map
Editing is disabled because sequence edits have been locked.
cctgcaggcagctgcgcgctcgctcgctcactgaggccgcccgggcaaagcccgggcgtcgggcgacctttggtcgcccggcctcagtgagcgagcgagcgcgcagagagggagtggccaactccatcactaggggttcctgcggccgcacgcgtaaggatctgcgatcgctccgggacgtccgtcgacgcgcgagcgagcgagtgactccggcgggcccgtttcgggcccgcagcccgctggaaaccagcgggccggagtcactcgctcgctcgcgcgtctctccctcaccggttgaggtagtgatccccaaggacgccggcgtgcgcattcctagacgctagcgaggcMluIPvuIAsiSIAflIIIL-ITREF1 promoter20406080100120140160
gtgcccgtcagtgggcagagcgcacatcgcccacagtccccgagaagttggggggaggggtcggcaattgaacgggtgcctagagaaggtggcgcggggtaaactgggaaagtgatgtcgtgtactggctccgcctttttcccgagggtgggggagaaccgtatataagtgcagtcacgggcagtcacccgtctcgcgtgtagcgggtgtcaggggctcttcaacccccctccccagccgttaacttgcccacggatctcttccaccgcgccccatttgaccctttcactacagcacatgaccgaggcggaaaaagggctcccaccccctcttggcatatattcacgtcaMfeIEcoNIEF1 promoter180200220240260280300320340
agtcgccgtgaacgttctttttcgcaacgggtttgccgccagaacacagctgaagcttcgaggggctcgcatctctccttcacgcgcccgccgccctacctgaggccgccatccacgccggttgagtcgcgttctgccgcctcccgcctgtggtgcctcctgaactgcgtccgcctcagcggcacttgcaagaaaaagcgttgcccaaacggcggtcttgtgtcgacttcgaagctccccgagcgtagagaggaagtgcgcgggcggcgggatggactccggcggtaggtgcggccaactcagcgcaagacggcggagggcggacaccacggaggacttgacgcaggcggCspCIEcoNIBsu36IHindIIIEF1 promoter360380400420440460480500520
gtctaggtaagtttaaagctcaggtcgagaccgggcctttgtccggcgctcccttggagcctacctagactcagccggctctccacgctttgcctgaccctgcttgctcaactctacgtctttgtttcgttttctgttctgcgccgttacagatccaagctgtgaccggcgcctacagatccattcaaatttcgagtccagctctggcccggaaacaggccgcgagggaacctcggatggatctgagtcggccgagaggtgcgaaacggactgggacgaacgagttgagatgcagaaacaaagcaaaagacaagacgcggcaatgtctaggttcgacactggccgcggatEF1 promoter540560580600620640660680700
cggatccgaagttcctattctctagaaagtataggaacttcgcagagtagtagctggattgtagctgctattagcaatctaaaacctcttagaagttcctattcttcaaaaggtataggaacttcggcgcgccgccaccatggactatggcggcgctttgtctgccgtcggacgcgcctaggcttcaaggataagagatctttcatatccttgaagcgtctcatcatcgacctaacatcgacgataatcgttagattttggagaatcttcaaggataagaagttttccatatccttgaagccgcgcggcggtggtacctgataccgccgcgaaacagacggcagcctgcgAscIXbaIBamHIChR2(H134R) Exon 1FRTF5720740760780800820840860
gaacttttgttcgttactaatcctgtggtggtgaacgggtccgtcctggtccctgaggatcaatgttactgtgccggatggattgaatctcgcggcacgaacggcgctcagaccgcgtcaaatgtcctgcagtggcttgcagcaggattcagcattttgctgctgatgttctatgcttgaaaacaagcaatgattaggacaccaccacttgcccaggcaggaccagggactcctagttacaatgacacggcctacctaacttagagcgccgtgcttgccgcgagtctggcgcagtttacaggacgtcaccgaacgtcgtcctaagtcgtaaaacgacgactacaagatacPflFIBsu36ITth111IChR2(H134R) Exon 18809009209409609801,0001,0201,040
cctaccaaacctggaaatctacatgcggctgggaggagatctatgtgtgcgccattgaaatggttaaggtgattctcgagttcttttttgagtttaagaatccctctatgctctaccttgccacaggacaccgggtgcagtggctgcgctatgcagagtggctgctcacttgtccggatggtttggacctttagatgtacgccgaccctcctctagatacacacgcggtaactttaccaattccactaagagctcaagaaaaaactcaaattcttagggagatacgagatggaacggtgtcctgtggcccacgtcaccgacgcgatacgtctcaccgacgagtgaacaggTliIXhoIBglIIBstAPIDraIIIPaeR7IChR2(H134R) Exon 11,0601,0801,1001,1201,1401,1601,1801,2001,220
tgtcatccttatccgcctgagcaacctcaccggtaagtgtcggggttgctagcataacttcgtatagtataccttatacgaagttattctttgcaccattctaaagaataacagtgataatttctgggttaaggcaaataacttcgtataggatactttatacgaagttatggtaacagtaggaataggcggactcgttggagtggccattcacagccccaacgatcgtattgaagcatatcatatggaatatgcttcaataagaaacgtggtaagatttcttattgtcactattaaagacccaattccgtttattgaagcatatcctatgaaatatgcttcaataccatAgeIBmtINheIXmnIAcc65IBstZ17Ilox Nlox 2722ChR2(H134R) Exon 1CMV ...nor1,2401,2601,2801,3001,3201,3401,3601,3801,400
cccctcctgtactcacctgggtcacggtcaccacgccgccgtcctcgaagttcatcacgcgctcccacttgaagccctcggggaaggacagcttcaagtagtcggggatgtcggcggggtgcttcacgtaggccttggagccgtacatgaactgaggggacaggatgtcccaggcggggaggacatgagtggacccagtgccagtggtgcggcggcaggagcttcaagtagtgcgcgagggtgaacttcgggagccccttcctgtcgaagttcatcagcccctacagccgccccacgaagtgcatccggaacctcggcatgtacttgactcccctgtcctacagggtccgKpnImCherry Exon 1CE i...nor1,4201,4401,4601,4801,5001,5201,5401,560
gaagggcagggggccacccttggtcaccttcagcttggcggtctgggtgccctcgtaggggcggccctcgccctcgccctcgatctcgaactcgtggccgttcacggagccctccatgtgcaccttgaagcgcatgaactccttgatgatggccatgttatcctcctcgcccttgcttcccgtcccccggtgggaaccagtggaagtcgaaccgccagacccacgggagcatccccgccgggagcgggagcgggagctagagcttgagcaccggcaagtgcctcgggaggtacacgtggaacttcgcgtacttgaggaactactaccggtacaataggaggagcgggaacmCherry Exon 11,5801,6001,6201,6401,6601,6801,7001,7201,740
ctcacggcggccgctggcacggctccggcctcggcttcgtcttcgacgagagtctcgacctcgatctccgttccgccgatgttcagtttggtggttttgcggatatctccgtgaatcaatatgtgctcgtggatcaggacgcgcaggtagtgtcccaacaacccccaacaattttgagtgccgccggcgaccgtgccgaggccggagccgaagcagaagctgctctcagagctggagctagaggcaaggcggctacaagtcaaaccaccaaaacgcctatagaggcacttagttatacacgagcacctagtcctgcgcgtccatcacagggttgttgggggttgttaaaaBfuAIBspMIEcoRVPshAIChR2(H134R) Exon 21,7601,7801,8001,8201,8401,8601,8801,9001,920
tactcatcagatcaataatcgtgtgacctacggtggagccatagacgctcaggacgccaaaaccttcgggccccaaaatgaagagaattgggaacataccccagctcacgaaaaacagccatgccatgccggtcacgacctggcggcaccgaccctttggcacagtatgataaccatgagtagtctagttattagcacactggatgccacctcggtatctgcgagtcctgcggttttggaagcccggggttttacttctcttaacccttgtatggggtcgagtgctttttgtcggtacggtacggccagtgctggaccgccgtggctgggaaaccgtgtcatactattggApaIPspOMIChR2(H134R) Exon 21,9401,9601,9802,0002,0202,0402,0602,0802,100
ctcgatatatgctttggcggcgtgaaaaaatgtgttcgcgccatagcacaatccaagacaaaagaagatgactttaacatagccggttgccatggcgctggtagccccccacacgatagtcccgatgtctgagacaaggagtcccatggttctcctgctgtagtcgttgctcagggagctatatacgaaaccgccgcacttttttacacaagcgcggtatcgtgttaggttctgttttcttctactgaaattgtatcggccaacggtaccgcgaccatcggggggtgtgctatcagggctacagactctgttcctcagggtaccaagaggacgacatcagcaacgagtccChR2(H134R) Exon 22,1202,1402,1602,1802,2002,2202,2402,260
cctaaacacatgagaaatagagtcataagcacatgggtcacatacaggagatatgtatataacattaatacaatttataaaaaaaagggggggcacaactagtataacttcgtataaggtatactatacgaagttattaagaggtttcatattgctaatagcagctacaatccagggatttgtgtactctttatctcagtattcgtgtacccagtgtatgtcctctatacatatattgtaattatgttaaatattttttttcccccccgtgttgatcatattgaagcatattccatatgatatgcttcaataattctccaaagtataacgattatcgtcgatgttaggtcAseIPsiISpeIBstZ17ICMV bplox N RevCMV i...ptor2,2802,3002,3202,3402,3602,3802,4002,4202,440
ctaccattctgcataacttcgtataaagtatcctatacgaagttatgtcgactggagagtggccagcccttctcatgttcagagaacatggttaactggttaagtcatgtcgtcccacaggactcctccctgcaggacggcgagttcatctacaaggtgaagctgcgcggcaccagatggtaagacgtattgaagcatatttcataggatatgcttcaatacagctgacctctcaccggtcgggaagagtacaagtctcttgtaccaattgaccaattcagtacagcagggtgtcctgaggagggacgtcctgccgctcaagtagatgttccacttcgacgcgccgtggtHpaISalICE bpmCherry Exon2lox 2722 Rev2,4602,4802,5002,5202,5402,5602,5802,6002,620
acttcccctccgacggccccgtaatgcagaagaagaccatgggctgggaggcctcctccgagcggatgtaccccgaggacggcgccctgaagggcgagatcaagcagaggctgaagctgaaggacggcggccactacgacgctgaggtcaagaccacctacaaggccaagaagcctgaaggggaggctgccggggcattacgtcttcttctggtacccgaccctccggaggaggctcgcctacatggggctcctgccgcgggacttcccgctctagttcgtctccgacttcgacttcctgccgccggtgatgctgcgactccagttctggtggatgttccggttcttcggBbvCIPflMImCherry Exon22,6402,6602,6802,7002,7202,7402,7602,7802,800
cgtgcagctgcccggcgcctacaacgtcaacatcaagttggacatcacctcccacaacgaggactacaccatcgtggaacagtacgaacgcgccgagggccgccactccaccggcggcatggacgagctgtacaagtaagctagcgaagttcctatactttctagagaataggaagcacgtcgacgggccgcggatgttgcagttgtagttcaacctgtagtggagggtgttgctcctgatgtggtagcaccttgtcatgcttgcgcggctcccggcggtgaggtggccgccgtacctgctcgacatgttcattcgatcgcttcaaggatatgaaagatctcttatccttAleIBmtINheIXbaIXcmIBsrGISgrAImCherry Exon2FRT rev2,8202,8402,8602,8802,9002,9202,9402,960
cttctaagcagacaatcttgtaatacatcagcagctagtagattgctccagctagaagttcctataccttttgaagaataggaacttcgaattcgatatcaagcttatcgataatcaacctctggattacaaaatttgtgaaagattgactggtattcttaactatgttgctcctgaagattcgtctgttagaacattatgtagtcgtcgatcatctaacgaggtcgatcttcaaggatatggaaaacttcttatccttgaagcttaagctatagttcgaatagctattagttggagacctaatgttttaaacactttctaactgaccataagaattgatacaacgaggaClaIBspDIBstBIEcoRIEcoRVHindIIIWPREF5 rev2,9803,0003,0203,0403,0603,0803,1003,1203,140
tttacgctatgtggatacgctgctttaatgcctttgtatcatgctattgcttcccgtatggctttcattttctcctccttgtataaatcctggttgctgtctctttatgaggagttgtggcccgttgtcaggcaacgtggcgtggtgtgcactgtgtttgctgacgcaacccccaaaatgcgatacacctatgcgacgaaattacggaaacatagtacgataacgaagggcataccgaaagtaaaagaggaggaacatatttaggaccaacgacagagaaatactcctcaacaccgggcaacagtccgttgcaccgcaccacacgtgacacaaacgactgcgttgggggtWPRE3,1603,1803,2003,2203,2403,2603,2803,3003,320
ctggttggggcattgccaccacctgtcagctcctttccgggactttcgctttccccctccctattgccacggcggaactcatcgccgcctgccttgcccgctgctggacaggggctcggctgttgggcactgacaattccgtggtgttgtcggggaaatcatcgtcctttccttggaccaaccccgtaacggtggtggacagtcgaggaaaggccctgaaagcgaaagggggagggataacggtgccgccttgagtagcggcggacggaacgggcgacgacctgtccccgagccgacaacccgtgactgttaaggcaccacaacagcccctttagtagcaggaaaggaacPfoIPflMIWPRE3,3403,3603,3803,4003,4203,4403,4603,4803,500
gctgctcgcctgtgttgccacctggattctgcgcgggacgtccttctgctacgtcccttcggccctcaatccagcggaccttccttcccgcggcctgctgccggctctgcggcctcttccgcgtcttcgccttcgccctcagacgagtcggatctccctttgggccgcctccccgcgacgagcggacacaacggtggacctaagacgcgccctgcaggaagacgatgcagggaagccgggagttaggtcgcctggaaggaagggcgccggacgacggccgagacgccggagaaggcgcagaagcggaagcgggagtctgctcagcctagagggaaacccggcggaggggcZraIAatIISacIIWPRE3,5203,5403,5603,5803,6003,6203,6403,660
catcgataccgagcgctgctcgagagatctacgggtggcatccctgtgacccctccccagtgcctctcctggccctggaagttgccactccagtgcccaccagccttgtcctaataaaattaagttgcatcattttgtctgactaggtgtccttctataatattatggggtggaggtagctatggctcgcgacgagctctctagatgcccaccgtagggacactggggaggggtcacggagaggaccgggaccttcaacggtgaggtcacgggtggtcggaacaggattattttaattcaacgtagtaaaacagactgatccacaggaagatattataataccccacctcAfeIAleIClaITliIXhoIBglIIBspDICspCIPaeR7IhGH polyAWPRE3,6803,7003,7203,7403,7603,7803,8003,8203,840
gggggtggtatggagcaaggggcaagttgggaagacaacctgtagggcctgcggggtctattgggaaccaagctggagtgcagtggcacaatcttggctcactgcaatctccgcctcctgggttcaagcgattctcctgcctcagcctcccgagttgttgggattccaggcatgccccccaccatacctcgttccccgttcaacccttctgttggacatcccggacgccccagataacccttggttcgacctcacgtcaccgtgttagaaccgagtgacgttagaggcggaggacccaagttcgctaagaggacggagtcggagggctcaacaaccctaaggtccgtacgBcgISphIBbvCIhGH polyA3,8603,8803,9003,9203,9403,9603,9804,0004,020
atgaccaggctcagctaatttttgtttttttggtagagacggggtttcaccatattggccaggctggtctccaactcctaatctcaggtgatctacccaccttggcctcccaaattgctgggattacaggcgtgaaccactgctcccttccctgtccttctgattttgtaggtaatactggtccgagtcgattaaaaacaaaaaaaccatctctgccccaaagtggtataaccggtccgaccagaggttgaggattagagtccactagatgggtggaaccggagggtttaacgaccctaatgtccgcacttggtgacgagggaagggacaggaagactaaaacatccattBlpINsiIhGH polyA4,0404,0604,0804,1004,1204,1404,1604,1804,200
ccacgtgcggaccgagcggccgcaggaacccctagtgatggagttggccactccctctctgcgcgctcgctcgctcactgaggccgggcgaccaaaggtcgcccgacgcccgggctttgcccgggcggcctcagtgagcgagcgagcgcgcagctgcctgcaggggcgcctgatgggtgcacgcctggctcgccggcgtccttggggatcactacctcaaccggtgagggagagacgcgcgagcgagcgagtgactccggcccgctggtttccagcgggctgcgggcccgaaacgggcccgccggagtcactcgctcgctcgcgcgtcgacggacgtccccgcggactacPmlIRsrIIR-ITR4,2204,2404,2604,2804,3004,3204,3404,360
cggtattttctccttacgcatctgtgcggtatttcacaccgcatacgtcaaagcaaccatagtacgcgccctgtagcggcgcattaagcgcggcgggtgtggtggttacgcgcagcgtgaccgctacacttgccagcgccctagcgcccgctcctttcgctttcttcccttccttgccataaaagaggaatgcgtagacacgccataaagtgtggcgtatgcagtttcgttggtatcatgcgcgggacatcgccgcgtaattcgcgccgcccacaccaccaatgcgcgtcgcactggcgatgtgaacggtcgcgggatcgcgggcgaggaaagcgaaagaagggaaggaaf1 Origin4,3804,4004,4204,4404,4604,4804,5004,5204,540
tctcgccacgttcgccggctttccccgtcaagctctaaatcgggggctccctttagggttccgatttagtgctttacggcacctcgaccccaaaaaacttgatttgggtgatggttcacgtagtgggccatcgccctgatagacggtttttcgccctttgacgttggagtccacgagagcggtgcaagcggccgaaaggggcagttcgagatttagcccccgagggaaatcccaaggctaaatcacgaaatgccgtggagctggggttttttgaactaaacccactaccaagtgcatcacccggtagcgggactatctgccaaaaagcgggaaactgcaacctcaggtgcDraIIIf1 Origin4,5604,5804,6004,6204,6404,6604,6804,7004,720
ttctttaatagtggactcttgttccaaactggaacaacactcaaccctatctcgggctattcttttgatttataagggattttgccgatttcggcctattggttaaaaaatgagctgatttaacaaaaatttaacgcgaattttaacaaaatattaacgtttacaattttatggtaagaaattatcacctgagaacaaggtttgaccttgttgtgagttgggatagagcccgataagaaaactaaatattccctaaaacggctaaagccggataaccaattttttactcgactaaattgtttttaaattgcgcttaaaattgttttataattgcaaatgttaaaataccaPsiIf1 Origin4,7404,7604,7804,8004,8204,8404,8604,8804,900
gcactctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcgtgagagtcatgttagacgagactacggcgtatcaattcggtcggggctgtgggcggttgtgggcgactgcgcgggactgcccgaacagacgagggccgtaggcgaatgtctgttcgacactggcagaggccctcgacgtacacagtctccaaaagtggcagtagtggctttgcPfoI4,9204,9404,9604,9805,0005,0205,0405,060
cgcgagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatggtttcttagacgtcaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatatgtatccgctcatgagacaataaccctgataagcgctctgctttcccggagcactatgcggataaaaatatccaattacagtactattattaccaaagaatctgcagtccaccgtgaaaagcccctttacacgcgccttggggataaacaaataaaaagatttatgtaagtttatacataggcgagtactctgttattgggactattZraIAatII5,0805,1005,1205,1405,1605,1805,2005,2205,240
atgcttcaataatattgaaaaaggaagagtatgagtattcaacatttccgtgtcgcccttattcccttttttgcggcattttgccttcctgtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgcacgagtgggttacatcgaactggatctacgaagttattataactttttccttctcatactcataagttgtaaaggcacagcgggaataagggaaaaaacgccgtaaaacggaaggacaaaaacgagtgggtctttgcgaccactttcattttctacgacttctagtcaacccacgtgctcacccaatgtagcttgacctagAmpR5,2605,2805,3005,3205,3405,3605,3805,4005,420
tcaacagcggtaagatccttgagagttttcgccccgaagaacgttttccaatgatgagcacttttaaagttctgctatgtggcgcggtattatcccgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgacttggttgagtactcaccagtcacagttgtcgccattctaggaactctcaaaagcggggcttcttgcaaaaggttactactcgtgaaaatttcaagacgatacaccgcgccataatagggcataactgcggcccgttctcgttgagccagcggcgtatgtgataagagtcttactgaaccaactcatgagtggtcagtgBcgIScaIXmnIAmpR5,4405,4605,4805,5005,5205,5405,5605,5805,600
agaaaagcatcttacggatggcatgacagtaagagaattatgcagtgctgccataaccatgagtgataacactgcggccaacttacttctgacaacgatcggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtaactcgccttgatcgttgggaaccgtcttttcgtagaatgcctaccgtactgtcattctcttaatacgtcacgacggtattggtactcactattgtgacgccggttgaatgaagactgttgctagcctcctggcttcctcgattggcgaaaaaacgtgttgtaccccctagtacattgagcggaactagcaacccttggcPvuIAmpR5,6205,6405,6605,6805,7005,7205,7405,760
gagctgaatgaagccataccaaacgacgagcgtgacaccacgatgcctgtagcaatggcaacaacgttgcgcaaactattaactggcgaactacttactctagcttcccggcaacaattaatagactggatggaggcggataaagttgcaggaccacttctgcgctcggcccttcctcgacttacttcggtatggtttgctgctcgcactgtggtgctacggacatcgttaccgttgttgcaacgcgtttgataattgaccgcttgatgaatgagatcgaagggccgttgttaattatctgacctacctccgcctatttcaacgtcctggtgaagacgcgagccgggaagAseIFspIAmpR5,7805,8005,8205,8405,8605,8805,9005,9205,940
cggctggctggtttattgctgataaatctggagccggtgagcgtgggtctcgcggtatcattgcagcactggggccagatggtaagccctcccgtatcgtagttatctacacgacggggagtcaggcaactatggatgaacgaaatagacagatcgctgagataggtgcctcactgccgaccgaccaaataacgactatttagacctcggccactcgcacccagagcgccatagtaacgtcgtgaccccggtctaccattcgggagggcatagcatcaatagatgtgctgcccctcagtccgttgatacctacttgctttatctgtctagcgactctatccacggagtgaAmpR5,9605,9806,0006,0206,0406,0606,0806,1006,120
gattaagcattggtaactgtcagaccaagtttactcatatatactttagattgatttaaaacttcatttttaatttaaaaggatctaggtgaagatcctttttgataatctcatgaccaaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaagatcctaattcgtaaccattgacagtctggttcaaatgagtatatatgaaatctaactaaattttgaagtaaaaattaaattttcctagatccacttctaggaaaaactattagagtactggttttagggaattgcactcaaaagcaaggtgactcgcagtctggggcatcttttctagAmpRpUC ori6,1406,1606,1806,2006,2206,2406,2606,2806,300
aaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaaaaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgttttcctagaagaactctaggaaaaaaagacgcgcattagacgacgaacgtttgtttttttggtggcgatggtcgccaccaaacaaacggcctagttctcgatggttgagaaaaaggcttccattgaccgaagtcgtctcgcgtctatggtttatgacaggaagatcacatcggcapUC ori6,3206,3406,3606,3806,4006,4206,4406,460
agttaggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctgttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacatcaatccggtggtgaagttcttgagacatcgtggcggatgtatggagcgagacgattaggacaatggtcaccgacgacggtcaccgctattcagcacagaatggcccaacctgagttctgctatcaatggcctattccgcgtcgccagcccgacttgccccccaagcacgtgtgtpUC ori6,4806,5006,5206,5406,5606,5806,6006,6206,640
gcccagcttggagcgaacgacctacaccgaactgagatacctacagcgtgagctatgagaaagcgccacgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggagagcgcacgagggagcttccagggggaaacgcctggtatctttatagtcgggtcgaacctcgcttgctggatgtggcttgactctatggatgtcgcactcgatactctttcgcggtgcgaagggcttccctctttccgcctgtccataggccattcgccgtcccagccttgtcctctcgcgtgctccctcgaaggtccccctttgcggaccatagaaatatcapUC ori6,6606,6806,7006,7206,7406,7606,7806,8006,820
cctgtcgggtttcgccacctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctatggaaaaacgccagcaacgcggcctttttacggttcctggccttttgctggccttttgctcacatgtggacagcccaaagcggtggagactgaactcgcagctaaaaacactacgagcagtccccccgcctcggatacctttttgcggtcgttgcgccggaaaaatgccaaggaccggaaaacgaccggaaaacgagtgtacaPciIAflIIIpUC ori6,8406,8606,8806,9006,9206,9406,960
  • Plasmid
Editing is disabled because sequence edits have been locked.
6961 bp500055006000650050010001500mCherry Exon 1H134RL-ITR,AflIII,MluI,AsiSI,PvuI,MfeI,EcoNI,HindIIIEF1 promoter,EcoNI,Bsu36I,CspCIFRT,F5,KOZAK,BamHI,XbaI,AscIChR2(H134R) Exon 1,Bsu36I,PflFI,Tth111IBglII,PaeR7I,TliI,XhoI,DraIII,BstAPICMV intron donor,lox N,AgeI,NheI,BmtI,BstZ17I,XmnIlox 2722Acc65ICE intron donor,KpnIXmnIBcgI,ScaIAmpR,PvuIFspIAseIpUC ori,AflIII,PciI

Welcome to Benchling!

Sign in to view data.

New digest

Saved digests

Enzyme AatII
Enzyme lists
Cut sites visible on maps
Find enzyme
Name Cuts
Selected Color
Show enzymes that cut

Primers

Version history

 Show full history
Change User Timestamp

Sequence Alignments

Saved alignments

Sequence Info

Tags

Name
Parent version
Folder
Topology
Start index
Locked
Created
--
Length
--
Export data
Split Workspace
Bases
6961