Welcome to Benchling!

You're looking at a DNA Sequence. Here are some things you can do with it:

Create an alignment

  1. Create alignments with both DNA and AA sequences.
  2. Bulk-align multiple sequences at once.
  3. Powerful visualization tool to inspect alignments in detail.

Design a primer

Create a translation

Design a CRISPR guide

Assemble and transform a sequence

Benchling is actively tested against the latest versions of Chrome, Firefox, Safari, and Edge. **It doesn't look like your current browser is supported** - for more information, [click here](/browsers).
Monospace normal
Monospace bold
working...
Advanced Settings
JPZF2 CMV-TO-SCN1A-374-NZF
  • Sequence Map
Editing disabled on read-only sequence.
gttgacattgattattgactagttattaatagtaatcaattacggggtcattagttcatagcccatatatggagttccgcgttacataacttacggtaaatggcccgcctggctgaccgcccaacgacccccgcccattgacgtcaataatgacgtatgttcccatagtaacgcccaactgtaactaataactgatcaataattatcattagttaatgccccagtaatcaagtatcgggtatatacctcaaggcgcaatgtattgaatgccatttaccgggcggaccgactggcgggttgctgggggcgggtaactgcagttattactgcatacaagggtatcattgcggSpeICMV20406080100120140160
aatagggactttccattgacgtcaatgggtggagtatttacggtaaactgcccacttggcagtacatcaagtgtatcatatgccaagtacgccccctattgacgtcaatgacggtaaatggcccgcctggcattatgcccagtacatgaccttatgggactttcctacttggcagttatccctgaaaggtaactgcagttacccacctcataaatgccatttgacgggtgaaccgtcatgtagttcacatagtatacggttcatgcgggggataactgcagttactgccatttaccgggcggaccgtaatacgggtcatgtactggaataccctgaaaggatgaaccgtcNdeICMV180200220240260280300320340
tacatctacgtattagtcatcgctattaccatggtgatgcggttttggcagtacatcaatgggcgtggatagcggtttgactcacggggatttccaagtctccaccccattgacgtcaatgggagtttgttttggcaccaaaatcaacgggactttccaaaatgtcgtaacaactatgtagatgcataatcagtagcgataatggtaccactacgccaaaaccgtcatgtagttacccgcacctatcgccaaactgagtgcccctaaaggttcagaggtggggtaactgcagttaccctcaaacaaaaccgtggttttagttgccctgaaaggttttacagcattgttgaNcoICspCISnaBICMV360380400420440460480500520
ccgccccattgacgcaaatgggcggtaggcgtgtacggtgggaggtctatataagcagagctctccctatcagtgatagagatctccctatcagtgatagagatcgtcgacgagctcgtttagtgaaccgtcagatcgcctggagacgccatccacgctgttttgacctccatagggcggggtaactgcgtttacccgccatccgcacatgccaccctccagatatattcgtctcgagagggatagtcactatctctagagggatagtcactatctctagcagctgctcgagcaaatcacttggcagtctagcggacctctgcggtaggtgcgacaaaactggaggtatcSacISacIBsaBIBsaBISgrDIEco53kIEco53kICMVTetR binding sitesTetOTetO540560580600620640660680700
aagacaccgggaccgatccagcctccggactctagcgtttaaacttaagcttcgccaccatgCACGGCTGTCACCTTTGCGGAAAGGCCTTCACACATTGCAGTGACCTGAGGAAGCACGAGAGAACCCATACCGGTGAACGTCCATATAGTTGCGGGATATGTGGGAAATCCTTttctgtggccctggctaggtcggaggcctgagatcgcaaatttgaattcgaagcggtggtacGTGCCGACAGTGGAAACGCCTTTCCGGAAGTGTGTAACGTCACTGGACTCCTTCGTGCTCTCTTGGGTATGGCCACTTGCAGGTATATCAACGCCCTATACACCCTTTAGGAAAgeIBbsIPmeIStuIAflIIBsu36IHindIIIHG2CH4LC6GK8AF10TH12CS14DL16RK18HE20RT22HT24GE26RP28YS30CG32IC34GK36SF38763-1914720740760780800820840860
TAGCGACTCTTCAGCTAAGCGACGGCACTGTATCCTTCACACTGGAGAACGGCCATTTGTATGTGGCGTTTGTAAAATGGGATTTTCCTTGCTCACTAGCCTCGCACAGCATCACTCCTCTCATACAGGCGAGAGACCGTATGAATGCAAAGAGTGTGGAAAGACCTTTAGGCAAATCGCTGAGAAGTCGATTCGCTGCCGTGACATAGGAAGTGTGACCTCTTGCCGGTAAACATACACCGCAAACATTTTACCCTAAAAGGAACGAGTGATCGGAGCGTGTCGTAGTGAGGAGAGTATGTCCGCTCTCTGGCATACTTACGTTTCTCACACCTTTCTGGAAATCCGTTBlpIBsaICspCISD40SS42AK44RR46HC48IL50HT52GE54RP56FV58CG60VC62KM64GF66SL68LT70SL72AQ74HH76SS78HT80GE82RP84YE86CK88EC90GK92TF94RQ96763-19148809009209409609801,0001,0201,040
TGTTCCCATCTCAAGCGTCACCAAAGGATTCATACTGGCGAAAGGCCCTATCAGTGCGGCCAGTGTGGAAAATCCTTTCGCCAGTCCTCTAACCTCCATCAACACCACCGTCTGCATCACACTGGTGAACGGCCTTACGAGTGTAAGGAGTGCGGCAAGACTTTCCGTCAGTGCAACAAGGGTAGAGTTCGCAGTGGTTTCCTAAGTATGACCGCTTTCCGGGATAGTCACGCCGGTCACACCTTTTAGGAAAGCGGTCAGGAGATTGGAGGTAGTTGTGGTGGCAGACGTAGTGTGACCACTTGCCGGAATGCTCACATTCCTCACGCCGTTCTGAAAGGCAGTCACGTAhdIAleICS98HL100KR102HQ104RI106HT108GE110RP112YQ114CG116QC118GK120SF122RQ124SS126NL128HQ130HH132RL134HH136TG138ER140PY142EC144KE146CG148KT150FR152QC154763-19141,0601,0801,1001,1201,1401,1601,1801,2001,220
GTCACCTGAAGCGCCATCAGCGCATTCACACTGGCGAACGCCCCTTTGAGTGCGCCGTGTGCGGGGAATCATTTGTGAACCCAGCAGAACTCGCCGATCATGTGACCGTGCACACCGGGGAGCGGCCGTATCAGTGTCACAATTGCGGTAAGAGTTTCATATCCAAGAGCCAGCTCAGTGGACTTCGCGGTAGTCGCGTAAGTGTGACCGCTTGCGGGGAAACTCACGCGGCACACGCCCCTTAGTAAACACTTGGGTCGTCTTGAGCGGCTAGTACACTGGCACGTGTGGCCCCTCGCCGGCATAGTCACAGTGTTAACGCCATTCTCAAAGTATAGGTTCTCGGTCGABsgIMfeIXcmISH156LK158RH160QR162IH164TG166ER168PF170EC172AV174CG176ES178FV180NP182AE184LA186DH188VT190VH192TG194ER196PY198QC200HN202CG204KS206FI208SK210SQ212L763-19141,2401,2601,2801,3001,3201,3401,3601,3801,400
GGACATTCACCATCGCATTCATgctgctgcaggcggaagcggaggctctggcggatctGAGGGCCAGAGCGACGAGAGAGCCCTGCTGGACCAGCTGCACACCCTGCTGAGCAACACCGACGCCACCGGCCTGGAGGAGATCGACAGAGCCCTGGGCATCCCCGAGCTGGTGAACCCTGTAAGTGGTAGCGTAAGTAcgacgacgtccgccttcgcctccgagaccgcctagaCTCCCGGTCTCGCTGCTCTCTCGGGACGACCTGGTCGACGTGTGGGACGACTCGTTGTGGCTGCGGTGGCCGGACCTCCTCTAGCTGTCTCGGGACCCGTAGGGGCTCGACCACTTGAvaIBlpIBsgIPasIPstIBsoBIBstXID214IH216HR218IH220AA222AG224GS226GG228SG230GS232EG234QS236DE238RA240LL242DQ244LH246TL248LS250NT252DA254TG256LE258EI260DR262AL264GI266PE268LV270N763-19141,4201,4401,4601,4801,5001,5201,5401,560
CAGGGCCAGGCCCTGGAGCCCAAGCAGGACGGAGGCTGGGGATCTATGGCCGAGGAATTCGTGACCCTGAAGGACGTGGGCATGGACTTCACCCTGGGCGACTGGGAGCAGCTGGGCCTGGAGCAGGGCGACACCTTCTGGGACACCGCCCTGGACAACTGCCAGGACCTGTTCCGTCCCGGTCCGGGACCTCGGGTTCGTCCTGCCTCCGACCCCTAGATACCGGCTCCTTAAGCACTGGGACTTCCTGCACCCGTACCTGAAGTGGGACCCGCTGACCCTCGTCGACCCGGACCTCGTCCCGCTGTGGAAGACCCTGTGGCGGGACCTGTTGACGGTCCTGGACAAGGPasIBmgBIEcoNIEcoRIPflMIPpuMIQ272GQ274AL276EP278KQ280DG282GW284GS286MA288EE290FV292TL294KD296VG298MD300FT302LG304DW306EQ308LG310LE312QG314DT316FW318DT320AL322DN324CQ326DL328F763-19141,5801,6001,6201,6401,6601,6801,7001,7201,740
TGCTGGACCCCCCCGGCGGAGGAGACGGCCTTGGTTTGGGACACGAGAAGTTCCCCAGCGACCTGGACCTGGACATGTTCAACGGCAGCCTGGAGTGCGACATGGAGAGCATCATCAGAAGCGAGCTGATGGACGCCGACGGCCTGGACTTCAACTTCGACAGCtaggccgctcgACGACCTGGGGGGGCCGCCTCCTCTGCCGGAACCAAACCCTGTGCTCTTCAAGGGGTCGCTGGACCTGGACCTGTACAAGTTGCCGTCGGACCTCACGCTGTACCTCTCGTAGTAGTCTTCGCTCGACTACCTGCGGCTGCCGGACCTGAAGTTGAAGCTGTCGatccggcgagcAvaIPciITliIXhoIBsoBIBstXIPspXIPaeR7IL330LD332PP334GG336GD338GL340GL342GH344EK346FP348SD350LD352LD354MF356NG358SL360EC362DM364ES366II368RS370EL372MD374AD376GL378DF380NF382DS384763-19141,7601,7801,8001,8201,8401,8601,8801,9001,920
aggagggcccgaacaaaaactcatctcagaagaggatctgaatagcgccgtcgaccatcatcataatcatcattgagtttaaacccgctgatcagcctcgactgtgccttctagttgccagccatctgttgtttgcccctcccccgtgccttccttgaccctggaaggtgccacttcctcccgggcttgtttttgagtagagtcttctcctagacttatcgcggcagctggtagtagtattagtagtaactcaaatttgggcgactagtcggagctgacacggaagatcaacggtcggtagacaacaaacggggagggggcacggaaggaactgggaccttccacggtgaApaIBclIPmeIPspOMIBGH polyadenylation sequencec-myc epitopePolyhi...e tag1,9401,9601,9802,0002,0202,0402,0602,0802,100
cccactgtcctttcctaataaaatgaggaaattgcatcgcattgtctgagtaggtgtcattctattctggggggtggggtggggcaggacagcaagggggaggattgggaagacaatagcaggcatgctggggatgcggtgggctctatggagatctatcgatgttctggggatggggtgacaggaaaggattattttactcctttaacgtagcgtaacagactcatccacagtaagataagaccccccaccccaccccgtcctgtcgttccccctcctaacccttctgttatcgtccgtacgacccctacgccacccgagatacctctagatagctacaagacccctacBbsIClaISphIBspDIBGH polyadenylation sequence2,1202,1402,1602,1802,2002,2202,2402,260
cggtgggctctatggcttctgaggcggaaagaaccagctggggctctagggggtatccccacgcgccctgtagcggcgcattaagcgcggcgggtgtggtggttacgcgcagcgtgaccgctacacttgccagcgccctagcgcccgctcctttcgctttcttcccttcctttctgccacccgagataccgaagactccgcctttcttggtcgaccccgagatcccccataggggtgcgcgggacatcgccgcgtaattcgcgccgcccacaccaccaatgcgcgtcgcactggcgatgtgaacggtcgcgggatcgcgggcgaggaaagcgaaagaagggaaggaaagaBGH pA2,2802,3002,3202,3402,3602,3802,4002,4202,440
cgccacgttcgccggctttccccgtcaagctctaaatcgggggctccctttagggttccgatttagtgctttacggcacctcgaccccaaaaaacttgattagggtgatggttcacgtacctagaagttcctattccgaagttcctattctctagaaagtataggaacttccttggcggtgcaagcggccgaaaggggcagttcgagatttagcccccgagggaaatcccaaggctaaatcacgaaatgccgtggagctggggttttttgaactaatcccactaccaagtgcatggatcttcaaggataaggcttcaaggataagagatctttcatatccttgaaggaacNaeIXbaINgoMIVFRT2,4602,4802,5002,5202,5402,5602,5802,6002,620
gccaaaaagcctgaactcaccgcgacgtctgtcgagaagtttctgatcgaaaagttcgacagcgtctccgacctgatgcagctctcggagggcgaagaatctcgtgctttcagcttcgatgtaggagggcgtggatatgtcctgcgggtaaatagctgcgccgatggtttctacacggtttttcggacttgagtggcgctgcagacagctcttcaaagactagcttttcaagctgtcgcagaggctggactacgtcgagagcctcccgcttcttagagcacgaaagtcgaagctacatcctcccgcacctatacaggacgcccatttatcgacgcggctaccaaagatgtBarIMscIPflFIPshAITth111IHygromycin2,6402,6602,6802,7002,7202,7402,7602,7802,800
aagatcgttatgtttatcggcactttgcatcggccgcgctcccgattccggaagtgcttgacattggggaattcagcgagagcctgacctattgcatctcccgccgtgcacagggtgtcacgttgcaagacctgcctgaaaccgaactgcccgctgttctgcagccggtcgcggattctagcaatacaaatagccgtgaaacgtagccggcgcgagggctaaggccttcacgaactgtaaccccttaagtcgctctcggactggataacgtagagggcggcacgtgtcccacagtgcaacgttctggacggactttggcttgacgggcgacaagacgtcggccagcgcctPstIBfuAIBspMIEcoRIDraIIIHygromycin2,8202,8402,8602,8802,9002,9202,9402,960
ggccatggatgcgatcgctgcggccgatcttagccagacgagcgggttcggcccattcggaccgcaaggaatcggtcaatacactacatggcgtgatttcatatgcgcgattgctgatccccatgtgtatcactggcaaactgtgatggacgacaccgtcagtgcgtccgtcgcgccggtacctacgctagcgacgccggctagaatcggtctgctcgcccaagccgggtaagcctggcgttccttagccagttatgtgatgtaccgcactaaagtatacgcgctaacgactaggggtacacatagtgaccgtttgacactacctgctgtggcagtcacgcaggcagcgcNcoINdeIPvuIAsiSIPflFIRsrIITth111IHygromycin2,9803,0003,0203,0403,0603,0803,1003,1203,140
caggctctcgatgagctgatgctttgggccgaggactgccccgaagtccggcacctcgtgcacgcggatttcggctccaacaatgtcctgacggacaatggccgcataacagcggtcattgactggagcgaggcgatgttcggggattcccaatacgaggtcgccaacatcttctgtccgagagctactcgactacgaaacccggctcctgacggggcttcaggccgtggagcacgtgcgcctaaagccgaggttgttacaggactgcctgttaccggcgtattgtcgccagtaactgacctcgctccgctacaagcccctaagggttatgctccagcggttgtagaagaDraIIIHygromycin3,1603,1803,2003,2203,2403,2603,2803,3003,320
tctggaggccgtggttggcttgtatggagcagcagacgcgctacttcgagcggaggcatccggagcttgcaggatcgccgcggctccgggcgtatatgctccgcattggtcttgaccaactctatcagagcttggttgacggcaatttcgatgatgcagcttgggcgcagggtcgagacctccggcaccaaccgaacatacctcgtcgtctgcgcgatgaagctcgcctccgtaggcctcgaacgtcctagcggcgccgaggcccgcatatacgaggcgtaaccagaactggttgagatagtctcgaaccaactgccgttaaagctactacgtcgaacccgcgtcccagcAjuISacIIHygromycin3,3403,3603,3803,4003,4203,4403,4603,4803,500
atgcgacgcaatcgtccgatccggagccgggactgtcgggcgtacacaaatcgcccgcagaagcgcggccgtctggaccgatggctgtgtagaagtactcgccgatagtggaaaccgacgccccagcactcgtccgagggcaaaggaatagcacgtactacgagatttcgattcctacgctgcgttagcaggctaggcctcggccctgacagcccgcatgtgtttagcgggcgtcttcgcgccggcagacctggctaccgacacatcttcatgagcggctatcacctttggctgcggggtcgtgagcaggctcccgtttccttatcgtgcatgatgctctaaagctaaggScaIHygromycin3,5203,5403,5603,5803,6003,6203,6403,660
accgccgccttctatgaaaggttgggcttcggaatcgttttccgggacgccggctggatgatcctccagcgcggggatctcatgctggagttcttcgcccaccccaacttgtttattgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcattggcggcggaagatactttccaacccgaagccttagcaaaaggccctgcggccgacctactaggaggtcgcgcccctagagtacgacctcaagaagcgggtggggttgaacaaataacgtcgaatattaccaatgtttatttcgttatcgtagtgtttaaagtgtttatttcgtaNaeIPfoIPsiINgoMIVSV40 pA3,6803,7003,7203,7403,7603,7803,8003,8203,840
ttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtctgtataccgtcgacctctagctagagcttggcgtaatcatggtcatagctgtttcctgtgtgaaattgttatccgctcacaattccacacaacatacgagccggaagcataaagtgaaaaaagtgacgtaagatcaacaccaaacaggtttgagtagttacatagaatagtacagacatatggcagctggagatcgatctcgaaccgcattagtaccagtatcgacaaaggacacactttaacaataggcgagtgttaaggtgtgttgtatgctcggccttcgtatttcacBstZ17ISV40 pA3,8603,8803,9003,9203,9403,9603,9804,0004,020
taaagcctggggtgcctaatgagtgagctaactcacattaattgcgttgcgctcactgcccgctttccagtcgggaaacctgtcgtgccagctgcattaatgaatcggccaacgcgcggggagaggcggtttgcgtattgggcgctcttccgcttcctcgctcactgactcgctgatttcggaccccacggattactcactcgattgagtgtaattaacgcaacgcgagtgacgggcgaaaggtcagccctttggacagcacggtcgacgtaattacttagccggttgcgcgcccctctccgccaaacgcataacccgcgagaaggcgaaggagcgagtgactgagcgacSapIBspQI4,0404,0604,0804,1004,1204,1404,1604,1804,200
cgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccataggctccgcccccctggcgagccagcaagccgacgccgctcgccatagtcgagtgagtttccgccattatgccaataggtgtcttagtcccctattgcgtcctttcttgtacactcgttttccggtcgttttccggtccttggcatttttccggcgcaacgaccgcaaaaaggtatccgaggcggggggacPciIpUC ori4,2204,2404,2604,2804,3004,3204,3404,360
acgagcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagtgctcgtagtgtttttagctgcgagttcagtctccaccgctttgggctgtcctgatatttctatggtccgcaaagggggaccttcgagggagcacgcgagaggacaaggctgggacggcgaatggcctatggacaggcggaaagagggaagcccttcgcaccgcgaaagagtatcpUC ori4,3804,4004,4204,4404,4604,4804,5004,5204,540
ctcacgctgtaggtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactggcagcagccactggtaacaggattagcgagtgcgacatccatagagtcaagccacatccagcaagcgaggttcgacccgacacacgtgcttggggggcaagtcgggctggcgacgcggaataggccattgatagcagaactcaggttgggccattctgtgctgaatagcggtgaccgtcgtcggtgaccattgtcctaatcgpUC ori4,5604,5804,6004,6204,6404,6604,6804,7004,720
agagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaagaacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccgctggtagcggtggtttttttgtctcgctccatacatccgccacgatgtctcaagaacttcaccaccggattgatgccgatgtgatcttcttgtcataaaccatagacgcgagacgacttcggtcaatggaagcctttttctcaaccatcgagaactaggccgtttgtttggtggcgaccatcgccaccaaaaaaacpUC ori4,7404,7604,7804,8004,8204,8404,8604,8804,900
tttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaaacgttcgtcgtctaatgcgcgtctttttttcctagagttcttctaggaaactagaaaagatgccccagactgcgagtcaccttgcttttgagtgcaattccctaaaaccagtactctaatagtttttcctagaagtggatctaggaaaatttaatttttacttcaaaatttagBspHIpUC ori4,9204,9404,9604,9805,0005,0205,0405,060
aatctaaagtatatatgagtaaacttggtctgacagttaccaatgcttaatcagtgaggcacctatctcagcgatctgtctatttcgttcatccatagttgcctgactccccgtcgtgtagataactacgatacgggagggcttaccatctggccccagtgctgcaatgataccgttagatttcatatatactcatttgaaccagactgtcaatggttacgaattagtcactccgtggatagagtcgctagacagataaagcaagtaggtatcaacggactgaggggcagcacatctattgatgctatgccctcccgaatggtagaccggggtcacgacgttactatggcAhdIBsaIAmp (bla)5,0805,1005,1205,1405,1605,1805,2005,2205,240
cgagacccacgctcaccggctccagatttatcagcaataaaccagccagccggaagggccgagcgcagaagtggtcctgcaactttatccgcctccatccagtctattaattgttgccgggaagctagagtaagtagttcgccagttaatagtttgcgcaacgttgttgccattggctctgggtgcgagtggccgaggtctaaatagtcgttatttggtcggtcggccttcccggctcgcgtcttcaccaggacgttgaaataggcggaggtaggtcagataattaacaacggcccttcgatctcattcatcaagcggtcaattatcaaacgcgttgcaacaacggtaacAclIFspIAmp (bla)5,2605,2805,3005,3205,3405,3605,3805,4005,420
ctacaggcatcgtggtgtcacgctcgtcgtttggtatggcttcattcagctccggttcccaacgatcaaggcgagttacatgatcccccatgttgtgcaaaaaagcggttagctccttcggtcctccgatcgttgtcagaagtaagttggccgcagtgttatcactcatggttatgatgtccgtagcaccacagtgcgagcagcaaaccataccgaagtaagtcgaggccaagggttgctagttccgctcaatgtactagggggtacaacacgttttttcgccaatcgaggaagccaggaggctagcaacagtcttcattcaaccggcgtcacaatagtgagtaccaataPvuIAmp (bla)5,4405,4605,4805,5005,5205,5405,5605,5805,600
ggcagcactgcataattctcttactgtcatgccatccgtaagatgcttttctgtgactggtgagtactcaaccaagtcattctgagaatagtgtatgcggcgaccgagttgctcttgcccggcgtcaatacgggataataccgcgccacatagcagaactttaaaagtgctcatcccgtcgtgacgtattaagagaatgacagtacggtaggcattctacgaaaagacactgaccactcatgagttggttcagtaagactcttatcacatacgccgctggctcaacgagaacgggccgcagttatgccctattatggcgcggtgtatcgtcttgaaattttcacgagtagBcgIScaIAmp (bla)5,6205,6405,6605,6805,7005,7205,7405,760
attggaaaacgttcttcggggcgaaaactctcaaggatcttaccgctgttgagatccagttcgatgtaacccactcgtgcacccaactgatcttcagcatcttttactttcaccagcgtttctgggtgagcaaaaacaggaaggcaaaatgccgcaaaaaagggaataagggcgataaccttttgcaagaagccccgcttttgagagttcctagaatggcgacaactctaggtcaagctacattgggtgagcacgtgggttgactagaagtcgtagaaaatgaaagtggtcgcaaagacccactcgtttttgtccttccgttttacggcgttttttcccttattcccgctAclIXmnIAmp (bla)5,7805,8005,8205,8405,8605,8805,9005,9205,940
cacggaaatgttgaatactcatactcttcctttttcaatattattgaagcatttatcagggttattgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaataggggttccgcgcacatttccccgaaaagtgccacctgacgtcgacggatcgggagatctgtgcctttacaacttatgagtatgagaaggaaaaagttataataacttcgtaaatagtcccaataacagagtactcgcctatgtataaacttacataaatctttttatttgtttatccccaaggcgcgtgtaaaggggcttttcacggtggactgcagctgcctagccctctagaSspIBspHISgrDIbla promoterAmp (bla)5,9605,9806,0006,0206,0406,0606,0806,1006,120
cccgatcccctatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagtatctgctccctgcttgtgtgttggaggtcgctgagtagtgcgcgagcaaaatttaagctacaacaaggcaaggcttgaccgacaattgcatgaagaatctgcttagggttaggcgggctaggggataccacgtgagagtcatgttagacgagactacggcgtatcaattcggtcatagacgagggacgaacacacaacctccagcgactcatcacgcgctcgttttaaattcgatgttgttccgttccgaactggctgttaacgtacttcttagacgaatcccaatccgMfeIBpu10I6,1406,1606,1806,2006,2206,2406,2606,2806,300
gttttgcgctgcttcgtacgggccagatatacgccaaaacgcgacgaagcatgcccggtctatatgcgMluIBsiWI6,320
  • Plasmid
Editing disabled on read-only sequence.
6334 bp450050005500600050010001500CMVTetR binding sitesTetO763-1914SpeI,NdeISnaBI,NcoI,CspCITATA box,TetO,Eco53kI,SacI,BsaBI,BsaBI,SgrDI,Eco53kI,SacI,BbsIPmeI,AflII,HindIII,StuI,Bsu36I,AgeIBlpIBsaI,CspCIAleIAhdI,BsgIMfeIXcmI,PstI,BsgIBlpIBstXI,PasI,AvaI,BsoBIBspHIAhdIBsaIFspI,AclIAmp (bla),PvuIScaI,BcgIAclI,XmnI,SspIbla promoter,BspHI,SgrDI,MfeI,Bpu10I,BsiWI,MluI

Welcome to Benchling!

Sign in to view data.

New digest

Saved digests

Enzyme AatII
Enzyme lists
Cut sites visible on maps
Find enzyme
Name Cuts
Selected Color
Show enzymes that cut

Primers

Version history

 Show full history
Change User Timestamp

Sequence Alignments

Saved alignments

Sequence Info

Tags

Name
Parent version
Folder
Topology
Start index
Locked
Created
--
Length
--
Export data
Split Workspace
Bases
6334