Welcome to Benchling!

You're looking at a DNA Sequence. Here are some things you can do with it:

Create an alignment

  1. Create alignments with both DNA and AA sequences.
  2. Bulk-align multiple sequences at once.
  3. Powerful visualization tool to inspect alignments in detail.

Design a primer

Create a translation

Design a CRISPR guide

Assemble and transform a sequence

Benchling is actively tested against the latest versions of Chrome, Firefox, Safari, and Edge. **It doesn't look like your current browser is supported** - for more information, [click here](/browsers).
Monospace normal
Monospace bold
working...
Advanced Settings
pAAV_hSyn FLEX-hM3D-mCitrine-2ACT (JGE206)
  • Sequence Map
Editing disabled on read-only sequence.
cctgcaggcagctgcgcgctcgctcgctcactgaggccgcccgggcaaagcccgggcgtcgggcgacctttggtcgcccggcctcagtgagcgagcgagcgcgcagagagggagtggccaactccatcactaggggttcctgcggccgcacgcgtgtgtctagactgcagagggcggacgtccgtcgacgcgcgagcgagcgagtgactccggcgggcccgtttcgggcccgcagcccgctggaaaccagcgggccggagtcactcgctcgctcgcgcgtctctccctcaccggttgaggtagtgatccccaaggacgccggcgtgcgcacacagatctgacgtctcccgEagIMluINotIAflIIIPspOMIL-ITRHuman S...omoter20406080100120140160
cctgcgtatgagtgcaagtgggttttaggaccaggatgaggcggggtgggggtgcctacctgacgaccgaccccgacccactggacaagcacccaacccccattccccaaattgcgcatcccctatcagagagggggaggggaaacaggatgcggcgaggcgcgtgcgcactgccggacgcatactcacgttcacccaaaatcctggtcctactccgccccacccccacggatggactgctggctggggctgggtgacctgttcgtgggttgggggtaaggggtttaacgcgtaggggatagtctctccccctcccctttgtcctacgccgctccgcgcacgcgtgacggApaIFspAIHuman Synapsin promoter180200220240260280300320340
agcttcagcaccgcggacagtgccttcgcccccgcctggcggcgcgcgccaccgccgcctcagcactgaaggcgcgctgacgtcactcgccggtcccccgcaaactccccttcccggccaccttggtcgcgtccgcgccgccgccggcccagccggaccgcaccacgcgaggcgctcgaagtcgtggcgcctgtcacggaagcgggggcggaccgccgcgcgcggtggcggcggagtcgtgacttccgcgcgactgcagtgagcggccagggggcgtttgaggggaagggccggtggaaccagcgcaggcgcggcggcggccgggtcggcctggcgtggtgcgctccgcgBbvCIRsrIISacIIHuman Synapsin promoter360380400420440460480500520
gagataggggggcacgggcgcgaccatctgcgctgcggcgccggcgactcagcgctgcctcagtctgcggtgggcagcggaggagtcgtgtcgtgcctgagagcgcagtcgagaaggtaccggatcctctagagtcgactccggaataacttcgtataggatactttatacgaagctctatccccccgtgcccgcgctggtagacgcgacgccgcggccgctgagtcgcgacggagtcagacgccacccgtcgcctcctcagcacagcacggactctcgcgtcagctcttccatggcctaggagatctcagctgaggccttattgaagcatatcctatgaaatatgcttcAccIAfeIKasIKpnIMreINarISalISfoIBamHIBspEIPluTISgrAIAcc65IHuman Synapsin promoterlox2722AAVseq F540560580600620640660680700
ttatgcagaatggtagctggattgtagctgctattagcaatatgaaacctcttaataacttcgtatagcatacattatacgaagttatggcgcgcctcacacacagctaaccttttcattcacggtttcaatattgtctgtacaattctcttccgactgttgtttccccagtgtaaatacgtcttaccatcgacctaacatcgacgataatcgttatactttggagaattattgaagcatatcgtatgtaatatgcttcaataccgcgcggagtgtgtgtcgattggaaaagtaagtgccaaagttataacagacatgttaagagaaggctgacaacaaaggggtcacatAscIBsrGI*V930CS928VK926EN924VT922EI920ND918TC916NE914ES912QQ910KG908LT906797-35892ACTloxP720740760780800820840860
accatggagcagtcatcaactgtctgctcagcatcttcctgtgagttctttttctgtcccacctggagctgactagacttgtaggccaatgctggtatagtgttcactaaaattaactgcagtggctttctgttttccttgtactgacactgaatgtaccttgagaaggcggacctggtacctcgtcagtagttgacagacgagtcgtagaaggacactcaagaaaaagacagggtggacctcgactgatctgaacatccggttacgaccatatcacaagtgattttaattgacgtcaccgaaagacaaaaggaacatgactgtgacttacatggaactcttccgcctggBlpINcoIXcmIVM904SC902DD900VT898QE896AD894EQ892SN890KK888QG886VQ884LQ882SS880KY878AL876AP874IT872NV870LI868LQ866LP864KR862NE860KY858QC856QI854YR852SF850AS848R797-35892ACT8809009209409609801,0001,0201,040
tataagttttggcgcgtcccttgtacagctcgtccatgccgagagtgatcccggcggcggtcacgaactccagcaggaccatgtgatcgcgcttctcgttggggtctttgctcagtttggactggtagctcaggtagtggttgtcgggcagcagcacggggccgtcgccgatgggatattcaaaaccgcgcagggaacatgtcgagcaggtacggctctcactagggccgccgccagtgcttgaggtcgtcctggtacactagcgcgaagagcaaccccagaaacgagtcaaacctgaccatcgagtccatcaccaacagcccgtcgtcgtgccccggcagcggctacccBsrGIY846TK844AR842GK840YL838ED836MG834LT832IG830AA828TV826FE824LL822VM820HD818RK816EN814PD812KS810LK808SQ806YS804LY802HN800DP798LL796VP794GD792GI790P797-3589mCitrine2ACT1,0601,0801,1001,1201,1401,1601,1801,2001,220
ggtgttctgctggtagtggtcggcgagctgcacgctgccgtcctcgatgttgtggcggatcttgaagttcaccttgatgccgttcttctgcttgtcggccatgatatagacgttgtggctgttgtagttgtactccagcttgtgccccaggatgttgccgtcctccttgaagtcgccacaagacgaccatcaccagccgctcgacgtgcgacggcaggagctacaacaccgcctagaacttcaagtggaactacggcaagaagacgaacagccggtactatatctgcaacaccgacaacatcaacatgaggtcgaacacggggtcctacaacggcaggaggaacttcagcT788NQ786QY784HD782AL780QV778SG776DE774IN772HR770IK768FN766VK764IG762NK760QK758DA756MI754YV752NH750SN748YN746YE744LK742HG740LI738NG736DE734KF732D797-3589mCitrine1,2401,2601,2801,3001,3201,3401,3601,3801,400
atgcccttcagctcgatgcggttcaccagggtgtcgccctcgaacttcacctcggcgcgggtcttgtagttgccgtcgtccttgaagaagatggtgcgctcctggacgtagccttcgggcatggcggacttgaagaagtcgtgctgcttcatgtggtcggggtagcgggcgaagctacgggaagtcgagctacgccaagtggtcccacagcgggagcttgaagtggagccgcgcccagaacatcaacggcagcaggaacttcttctaccacgcgaggacctgcatcggaagcccgtaccgcctgaacttcttcagcacgacgaagtacaccagccccatcgcccgcttcgI730GK728LE726IR724NV722LT720DG718EF716KV714EA712RT710KY708NG706DD704KF702FI700TR698EQ696VY694GE692PM690AS688KF686FD684HQ682KM680HD678PY676RA674FC672797-3589mCitrine1,4201,4401,4601,4801,5001,5201,5401,560
acatcaggccgtagccgaaggtggtcacgagggtgggccagggcacgggcagcttgccggtggtgcagatgaacttcagggtcagcttgccgtaggtggcatcgccctcgccctcgccggacacgctgaacttgtggccgtttacgtcgccgtccagctcgaccaggatgggcactgtagtccggcatcggcttccaccagtgctcccacccggtcccgtgcccgtcgaacggccaccacgtctacttgaagtcccagtcgaacggcatccaccgtagcgggagcgggagcggcctgtgcgacttgaacaccggcaaatgcagcggcaggtcgagctggtcctacccgtgML670GY668GF666TT664VL662TP660WP658VP656LK654GT652TC650IF648KL646TL644KG642YT640AD638GE636GE634GS632VS630FK628HG626NV624DG622DL620EV618LI616PV614797-3589mCitrine1,5801,6001,6201,6401,6601,6801,7001,7201,740
caccccggtgaacagctcctcgcccttgctcaccatgtcgaccaaggcctgctcgggtgcgcgcttgtgaaaaatgaccgactgtctctgctggtactgctgcttgcgcctcttttttttgtcacactggcacagcagcagcatcttgaaagtggttctgaatgttttgttgcacgtggggccacttgtcgaggagcgggaacgagtggtacagctggttccggacgagcccacgcgcgaacactttttactggctgacagagacgaccatgacgacgaacgcggagaaaaaaaacagtgtgaccgtgtcgtcgtcgtagaactttcaccaagacttacaaaacaacgtgAccISalIStuIVG612TF610LE608EG606KS604VM602DV600LA598QE596PA594RK592HF590IV588SQ586RQ584QY582QQ580KR578RK576KK574DC572QC570LL568LM566KF564TT562RF560TK558NC556797-3589hM3DqmCitrine1,7601,7801,8001,8201,8401,8601,8801,9001,920
agagcatagcacacggggttcacggtgctgttgatgtagcacagccagtagcccagattccaaaaggttttgggtatgcagctgtcacaaaaggtgttcaccagaaccatgatgttgtatggggtccaagtgatgatgaaggcaagcaagatcgcactgagggtctgggccgctttctcgtatcgtgtgccccaagtgccacgacaactacatcgtgtcggtcatcgggtctaaggttttccaaaacccatacgtcgacagtgttttccacaagtggtcttggtactacaacataccccaggttcactactacttccgttcgttctagcgtgactcccagacccggcgaaLA554YC552VP550NV548TS546NI544YC542LW540YG538LN536WF534TK532PI530CS528DC526FT524NV522LV520MI518NY516PT514WT512II510FA508LL506IA504SL502TQ500AA498K797-3589hM3Dq1,9401,9601,9802,0002,0202,0402,0602,0802,100
tcttctccttgaccagggacatccttttccgcttagtgatctgacttctggtcttcagagcaaacctcttggccagagtggcttccttgaaggacagaggtagagtggccgtgctcttacccactgaggagttgacgtcagaagtcttagctgtgtccacggctgactctagctgagaagaggaactggtccctgtaggaaaaggcgaatcactagactgaagaccagaagtctcgtttggagaaccggtctcaccgaaggaacttcctgtctccatctcaccggcacgagaatgggtgactcctcaactgcagtcttcagaatcgacacaggtgccgactgagatcgacK496EK494VL492SM490RK488RK486TI484QS482RT480KL478AF476RK474AL472TA470EK468FS466LP464LT462AT460SK458GV456SS454NV452DS450TK448AT446DV444AS442EL440Q797-3589hM3Dq2,1202,1402,1602,1802,2002,2202,2402,260
gatgggaagcttggagaagctttttggaaaactgcctccatcgtccacgctcttctgggcctgcagcttgtcggctttcctctccaagtccaccatccccagctcctcctcaggcacctgcaggttgtccgatgagggtaacttggtggagttgaggatggtgctgtgacccggactacccttcgaacctcttcgaaaaaccttttgacggaggtagcaggtgcgagaagacccggacgtcgaacagccgaaaggagaggttcaggtggtaggggtcgaggaggagtccgtggacgtccaacaggctactcccattgaaccacctcaactcctaccacgacactgggcctSapIBfuAIBfuAIBspMIBspMIBspQIPaqCIBsu36II438PL436KS434FS432KP430FS428GG426DD424VS422KQ420AQ418LK416DA414KR412EL410DV408MG406LE404EE402PV400QL398ND396SS394PL392KT390SN388LI386TS384HG382P797-3589hM3Dq2,2802,3002,3202,3402,3602,3802,4002,4202,440
agcttgagcacgatggagtagatggctctcgtctcggagccaatgtcctcctcgtcggaggaggcggagttctccagggaggcagcagcatcattgttgttccaactgtcactgctgctgtggtcttggtccatctgctcggagctgggtttccagctcttggttgtgaaccagatcgaactcgtgctacctcatctaccgagagcagagcctcggttacaggaggagcagcctcctccgcctcaagaggtccctccgtcgtcgtagtaacaacaaggttgacagtgacgacgacaccagaaccaggtagacgagcctcgacccaaaggtcgagaaccaacacttggtctPflMIL380KL378VI376SY374IA372RT370ES368GI366DE364ED362SS360AS358NE356LS354AA352AD350NN348NW346SD344SS342SH340DQ338DM336QE334SS332PK330WS328KT326TF324WF322797-3589hM3Dq2,4602,4802,5002,5202,5402,5602,5802,6002,620
agtggcagcggccatacttcctcctgttggagcgtttcatgctttgctgttgaagttcgtaactgctgcagcttcgagaactgcccgtggggtggacaaagttttctgtctctgcctctgtcccagaggcttgcaggccagcaagctctttggtacgcttttcagtttccttatatcaccgtcgccggtatgaaggaggacaacctcgcaaagtacgaaacgacaacttcaagcattgacgacgtcgaagctcttgacgggcaccccacctgtttcaaaagacagagacggagacagggtctccgaacgtccggtcgttcgagaaaccatgcgaaaagtcaaaggaatatHC320RG318YK316RR314NS312RK310MS308QQ306QL304EY302SS300CS298RS296SG294TP292HV290FN288ET286EA284ET282GS280AQ278LG276AL274EK272TR270KE268TE266KY264797-3589hM3Dq2,6402,6602,6802,7002,7202,7402,7602,7802,800
gatcctccagtataaaatagtcataatggtgacaggcatataaaaaccagcgatggctgtgccaaaagtaatggtgggctcactgaggaactgaatgaagcactctcccggaggcacagttctctttccaacaaagtattgccagaacaagatggcaggagcccaaaggacaaagctaggaggtcatattttatcagtattaccactgtccgtatatttttggtcgctaccgacacggttttcattaccacccgagtgactccttgacttacttcgtgagagggcctccgtgtcaagagaaaggttgtttcataacggtcttgttctaccgtcctcgggtttcctgtttcIR262WY260LI258TM256IT254VP252MY250FG248AI246AT244GF242TI240TP238ES236LF234QI232FC230EG228PP226VT224RK222GV220FY218QW216FL214IA212PA210WL208VF206797-3589hM3Dq2,8202,8402,8602,8802,9002,9202,9402,960
gagatgacccaagccagaccgatcatcacaccggctctctttgttgttcgtttggctcggtacgtgagcggcctcgtgatggaaaagtatctgtcaaagctgatgaccagaagattcataacagaggcattgctggctacgcagtcaatggcaagccagaggtcacaggccaagtctctactgggttcggtctggctagtagtgtggccgagagaaacaacaagcaaaccgagccatgcactcgccggagcactaccttttcatagacagtttcgactactggtcttctaagtattgtctccgtaacgaccgatgcgtcagttaccgttcggtctccagtgtccggttcaSI204VW202AL200GI198MV196GA194RK192TT190RK188AR186YT184LP182RT180IS178FY176RD174FS172IV170LL168NM166VS164AN162SA160VC158DI156AL154WL152DC150AL148N797-3589hM3Dq2,9803,0003,0203,0403,0603,0803,1003,1203,140
tccctaaggcccatcgattcatgatgatgtaggtcgtaaacagattcattgaaatgaccccgataatcagatcggcacaggccaggcttaagaggaagtagttgttgaccgtcttcagctgcttgttgaccttaaatgacacaattaccaggatgttgccgatgatggtcaccaaagggattccgggtagctaagtactactacatccagcatttgtctaagtaactttactggggctattagtctagccgtgtccggtccgaattctccttcatcaacaactggcagaagtcgacgaacaactggaatttactgtgttaatggtcctacaacggctactaccagtggttAflIIBstEIIBsu36IG146LA144WR142NM140II138YT136TF134LN132MS130IV128GI126IL124DA122CA120LS118LL116FY114NN112VT110KL108QK106NV104KF102SV100IV98LI96NG94II92TV90L797-3589hM3Dq3,1603,1803,2003,2203,2403,2603,2803,3003,320
ggccaggatgcccgttaagaaagcgatgaagaccacttgccagacggtatgacctcccagagggtcatcggtggtaccgtctggagaggagaaattgccagctgctcgagaaacattgtagctgccgaaatgagtgacggttcccgggggcagccctgcatcggaggggctgtgtccggtcctacgggcaattctttcgctacttctggtgaacggtctgccatactggagggtctcccagtagccaccatggcagacctctcctctttaacggtcgacgagctctttgtaacatcgacggctttactcactgccaagggcccccgtcgggacgtagcctccccgacacaKpnITliIXhoIAcc65IPaeR7IA88LI86GT84LF82AI80FV78VQ76WV74TH72GG70LP68DD66TT64GD62PS60SF58NG56AA54RS52VN50YS48GF46HT44VT42GP40PL38GA36DS34PS32H797-3589hM3Dq3,3403,3603,3803,4003,4203,4403,4603,4803,500
atccaggaggagctgatgtttggaaacaaaggcgaggttgtactgttattgtgcaaggtagcgtaatctggaacatcgtatgggtacatggtggctctagagggcccgtttaaacgctagcataacttcgtataaagtatcctatacgaagttatttgccttaacccagaaattataggtcctcctcgactacaaacctttgtttccgctccaacatgacaataacacgttccatcgcattagaccttgtagcatacccatgtaccaccgagatctcccgggcaaatttgcgatcgtattgaagcatatttcataggatatgcttcaataaacggaattgggtctttaatApaIBmtINheIPmeIPspOMII30WS28SS26IN24PF22LP20ST18TS16NN14HL12TA10YD8PV6DY4PY2M797-3589hM3Dqlox27223,5203,5403,5603,5803,6003,6203,6403,660
tcactgttattctttagaatggtgcaaagaataacttcgtataatgtatgctatacgaagttatgaattcgatatcaagcttatcgataatcaacctctggattacaaaatttgtgaaagattgactggtattcttaactatgttgctccttttacgctatgtggatacgctgctagtgacaataagaaatcttaccacgtttcttattgaagcatattacatacgatatgcttcaatacttaagctatagttcgaatagctattagttggagacctaatgttttaaacactttctaactgaccataagaattgatacaacgaggaaaatgcgatacacctatgcgacgaEcoRIEcoRVWPREloxP3,6803,7003,7203,7403,7603,7803,8003,8203,840
ttaatgcctttgtatcatgctattgcttcccgtatggctttcattttctcctccttgtataaatcctggttgctgtctctttatgaggagttgtggcccgttgtcaggcaacgtggcgtggtgtgcactgtgtttgctgacgcaacccccactggttggggcattgccaccacctaattacggaaacatagtacgataacgaagggcataccgaaagtaaaagaggaggaacatatttaggaccaacgacagagaaatactcctcaacaccgggcaacagtccgttgcaccgcaccacacgtgacacaaacgactgcgttgggggtgaccaaccccgtaacggtggtggaPflMIWPREAAVseq R3,8603,8803,9003,9203,9403,9603,9804,0004,020
gtcagctcctttccgggactttcgctttccccctccctattgccacggcggaactcatcgccgcctgccttgcccgctgctggacaggggctcggctgttgggcactgacaattccgtggtgttgtcggggaaatcatcgtcctttccttggctgctcgcctatgttgccacctgcagtcgaggaaaggccctgaaagcgaaagggggagggataacggtgccgccttgagtagcggcggacggaacgggcgacgacctgtccccgagccgacaacccgtgactgttaaggcaccacaacagcccctttagtagcaggaaaggaaccgacgagcggatacaacggtggacWPRE4,0404,0604,0804,1004,1204,1404,1604,1804,200
gattctgcgcgggacgtccttctgctacgtcccttcggccctcaatccagcggaccttccttcccgcggcctgctgccggctctgcggcctcttccgcgtcttcgccttcgccctcagacgagtcggatctccctttgggccgcctccccgcatcgataccgagcgctgctcgagctaagacgcgccctgcaggaagacgatgcagggaagccgggagttaggtcgcctggaaggaagggcgccggacgacggccgagacgccggagaaggcgcagaagcggaagcgggagtctgctcagcctagagggaaacccggcggaggggcgtagctatggctcgcgacgagctcAfeITliIXhoISacIIPaeR7IWPRE4,2204,2404,2604,2804,3004,3204,3404,360
agatctacgggtggcatccctgtgacccctccccagtgcctctcctggccctggaagttgccactccagtgcccaccagccttgtcctaataaaattaagttgcatcattttgtctgactaggtgtccttctataatattatggggtggaggggggtggtatggagcaaggggcatctagatgcccaccgtagggacactggggaggggtcacggagaggaccgggaccttcaacggtgaggtcacgggtggtcggaacaggattattttaattcaacgtagtaaaacagactgatccacaggaagatattataataccccacctccccccaccatacctcgttccccgtBglIICspCIhGH polyA4,3804,4004,4204,4404,4604,4804,5004,5204,540
agttgggaagacaacctgtagggcctgcggggtctattgggaaccaagctggagtgcagtggcacaatcttggctcactgcaatctccgcctcctgggttcaagcgattctcctgcctcagcctcccgagttgttgggattccaggcatgcatgaccaggctcagctaatttttgtcaacccttctgttggacatcccggacgccccagataacccttggttcgacctcacgtcaccgtgttagaaccgagtgacgttagaggcggaggacccaagttcgctaagaggacggagtcggagggctcaacaaccctaaggtccgtacgtactggtccgagtcgattaaaaacBlpINsiISphIBbvCIhGH polyA4,5604,5804,6004,6204,6404,6604,6804,7004,720
tttttttggtagagacggggtttcaccatattggccaggctggtctccaactcctaatctcaggtgatctacccaccttggcctcccaaattgctgggattacaggcgtgaaccactgctcccttccctgtccttctgattttgtaggtaaccacgtgcggaccgagcggccgcaaaaaaaaccatctctgccccaaagtggtataaccggtccgaccagaggttgaggattagagtccactagatgggtggaaccggagggtttaacgaccctaatgtccgcacttggtgacgagggaagggacaggaagactaaaacatccattggtgcacgcctggctcgccggcgtBsaIEagINotIPmlIBstXIRsrIIBstEIIhGH polyA4,7404,7604,7804,8004,8204,8404,8604,8804,900
ggaacccctagtgatggagttggccactccctctctgcgcgctcgctcgctcactgaggccgggcgaccaaaggtcgcccgacgcccgggctttgcccgggcggcctcagtgagcgagcgagcgcgcagctgcctgcaggggcgcctgatgcggtattttctccttacgcatctgccttggggatcactacctcaaccggtgagggagagacgcgcgagcgagcgagtgactccggcccgctggtttccagcgggctgcgggcccgaaacgggcccgccggagtcactcgctcgctcgcgcgtcgacggacgtccccgcggactacgccataaaagaggaatgcgtagacKasINarISfoIPluTIR-ITR4,9204,9404,9604,9805,0005,0205,0405,060
tgcggtatttcacaccgcatacgtcaaagcaaccatagtacgcgccctgtagcggcgcattaagcgcggcgggtgtggtggttacgcgcagcgtgaccgctacacttgccagcgccctagcgcccgctcctttcgctttcttcccttcctttctcgccacgttcgccggctttccacgccataaagtgtggcgtatgcagtttcgttggtatcatgcgcgggacatcgccgcgtaattcgcgccgcccacaccaccaatgcgcgtcgcactggcgatgtgaacggtcgcgggatcgcgggcgaggaaagcgaaagaagggaaggaaagagcggtgcaagcggccgaaaggf1 Origin5,0805,1005,1205,1405,1605,1805,2005,2205,240
ccgtcaagctctaaatcgggggctccctttagggttccgatttagtgctttacggcacctcgaccccaaaaaacttgatttgggtgatggttcacgtagtgggccatcgccctgatagacggtttttcgccctttgacgttggagtccacgttctttaatagtggactcttgttcggcagttcgagatttagcccccgagggaaatcccaaggctaaatcacgaaatgccgtggagctggggttttttgaactaaacccactaccaagtgcatcacccggtagcgggactatctgccaaaaagcgggaaactgcaacctcaggtgcaagaaattatcacctgagaacaagDraIIIf1 Origin5,2605,2805,3005,3205,3405,3605,3805,4005,420
caaactggaacaacactcaaccctatctcgggctattcttttgatttataagggattttgccgatttcggcctattggttaaaaaatgagctgatttaacaaaaatttaacgcgaattttaacaaaatattaacgtttacaattttatggtgcactctcagtacaatctgctctggtttgaccttgttgtgagttgggatagagcccgataagaaaactaaatattccctaaaacggctaaagccggataaccaattttttactcgactaaattgtttttaaattgcgcttaaaattgttttataattgcaaatgttaaaataccacgtgagagtcatgttagacgagacPsiIf1 ...in5,4405,4605,4805,5005,5205,5405,5605,5805,600
atgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcgcgagacgaaagggcctcgtgattacggcgtatcaattcggtcggggctgtgggcggttgtgggcgactgcgcgggactgcccgaacagacgagggccgtaggcgaatgtctgttcgacactggcagaggccctcgacgtacacagtctccaaaagtggcagtagtggctttgcgcgctctgctttcccggagcacta5,6205,6405,6605,6805,7005,7205,7405,760
acgcctatttttataggttaatgtcatgataataatggtttcttagacgtcaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatatgtatccgctcatgagacaataaccctgataaatgcttcaataatattgaaaaaggtgcggataaaaatatccaattacagtactattattaccaaagaatctgcagtccaccgtgaaaagcccctttacacgcgccttggggataaacaaataaaaagatttatgtaagtttatacataggcgagtactctgttattgggactatttacgaagttattataactttttcc5,7805,8005,8205,8405,8605,8805,9005,9205,940
aagagtatgagtattcaacatttccgtgtcgcccttattcccttttttgcggcattttgccttcctgtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgcacgagtgggttacatcgaactggatctcaacagcggtaagatccttgagattctcatactcataagttgtaaaggcacagcgggaataagggaaaaaacgccgtaaaacggaaggacaaaaacgagtgggtctttgcgaccactttcattttctacgacttctagtcaacccacgtgctcacccaatgtagcttgacctagagttgtcgccattctaggaactctAmpR5,9605,9806,0006,0206,0406,0606,0806,1006,120
gttttcgccccgaagaacgttttccaatgatgagcacttttaaagttctgctatgtggcgcggtattatcccgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgacttggttgagtactcaccagtcacagaaaagcatcttacggatggcatcaaaagcggggcttcttgcaaaaggttactactcgtgaaaatttcaagacgatacaccgcgccataatagggcataactgcggcccgttctcgttgagccagcggcgtatgtgataagagtcttactgaaccaactcatgagtggtcagtgtcttttcgtagaatgcctaccgtaScaIAmpR6,1406,1606,1806,2006,2206,2406,2606,2806,300
gacagtaagagaattatgcagtgctgccataaccatgagtgataacactgcggccaacttacttctgacaacgatcggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtaactcgccttgatcgttgggaaccggagctgaatgaagccataccaaacctgtcattctcttaatacgtcacgacggtattggtactcactattgtgacgccggttgaatgaagactgttgctagcctcctggcttcctcgattggcgaaaaaacgtgttgtaccccctagtacattgagcggaactagcaacccttggcctcgacttacttcggtatggtttgPvuIAmpR6,3206,3406,3606,3806,4006,4206,4406,460
gacgagcgtgacaccacgatgcctgtagcaatggcaacaacgttgcgcaaactattaactggcgaactacttactctagcttcccggcaacaattaatagactggatggaggcggataaagttgcaggaccacttctgcgctcggcccttccggctggctggtttattgctgatactgctcgcactgtggtgctacggacatcgttaccgttgttgcaacgcgtttgataattgaccgcttgatgaatgagatcgaagggccgttgttaattatctgacctacctccgcctatttcaacgtcctggtgaagacgcgagccgggaaggccgaccgaccaaataacgactatAseIAmpR6,4806,5006,5206,5406,5606,5806,6006,6206,640
aatctggagccggtgagcgtgggtctcgcggtatcattgcagcactggggccagatggtaagccctcccgtatcgtagttatctacacgacggggagtcaggcaactatggatgaacgaaatagacagatcgctgagataggtgcctcactgattaagcattggtaactgtcagattagacctcggccactcgcacccagagcgccatagtaacgtcgtgaccccggtctaccattcgggagggcatagcatcaatagatgtgctgcccctcagtccgttgatacctacttgctttatctgtctagcgactctatccacggagtgactaattcgtaaccattgacagtctBsaIAmpR6,6606,6806,7006,7206,7406,7606,7806,8006,820
ccaagtttactcatatatactttagattgatttaaaacttcatttttaatttaaaaggatctaggtgaagatcctttttgataatctcatgaccaaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaagatcaaaggatcttcttgagatccttttggttcaaatgagtatatatgaaatctaactaaattttgaagtaaaaattaaattttcctagatccacttctaggaaaaactattagagtactggttttagggaattgcactcaaaagcaaggtgactcgcagtctggggcatcttttctagtttcctagaagaactctaggaaaapUC ori6,8406,8606,8806,9006,9206,9406,9606,9807,000
tttctgcgcgtaatctgctgcttgcaaacaaaaaaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgtagttaggccaccacttcaagaactaaagacgcgcattagacgacgaacgtttgtttttttggtggcgatggtcgccaccaaacaaacggcctagttctcgatggttgagaaaaaggcttccattgaccgaagtcgtctcgcgtctatggtttatgacaggaagatcacatcggcatcaatccggtggtgaagttcttgapUC ori7,0207,0407,0607,0807,1007,1207,1407,160
ctgtagcaccgcctacatacctcgctctgctaatcctgttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagcccagcttggagcgaacgacctagacatcgtggcggatgtatggagcgagacgattaggacaatggtcaccgacgacggtcaccgctattcagcacagaatggcccaacctgagttctgctatcaatggcctattccgcgtcgccagcccgacttgccccccaagcacgtgtgtcgggtcgaacctcgcttgctggatAlwNIpUC ori7,1807,2007,2207,2407,2607,2807,3007,3207,340
caccgaactgagatacctacagcgtgagctatgagaaagcgccacgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggagagcgcacgagggagcttccagggggaaacgcctggtatctttatagtcctgtcgggtttcgccacctctgagtggcttgactctatggatgtcgcactcgatactctttcgcggtgcgaagggcttccctctttccgcctgtccataggccattcgccgtcccagccttgtcctctcgcgtgctccctcgaaggtccccctttgcggaccatagaaatatcaggacagcccaaagcggtggagactpUC ori7,3607,3807,4007,4207,4407,4607,4807,5007,520
cttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctatggaaaaacgccagcaacgcggcctttttacggttcctggccttttgctggccttttgctcacatgtgaactcgcagctaaaaacactacgagcagtccccccgcctcggatacctttttgcggtcgttgcgccggaaaaatgccaaggaccggaaaacgaccggaaaacgagtgtacaPciIAflIIIpUC ori7,5407,5607,5807,6007,620
  • Plasmid
Editing disabled on read-only sequence.
7637 bp550060006500700050010001500hM3DqAAVseq F797-3589

Welcome to Benchling!

Sign in to view data.

New digest

Saved digests

Enzyme AatII
Enzyme lists
Cut sites visible on maps
Find enzyme
Name Cuts
Selected Color
Show enzymes that cut

Primers

History

Lineage

 Show Full History
Change User Timestamp

Sequence Alignments

Saved Alignments

Sequence Info

Tags

Name
Parent Version
Folder
Topology
Start Index
Locked
Created
--
Length
--
Export Data
Split Workspace
Bases
7637