Welcome to Benchling!

You're looking at a DNA Sequence. Here are some things you can do with it:

Create an alignment

  1. Create alignments with both DNA and AA sequences.
  2. Bulk-align multiple sequences at once.
  3. Powerful visualization tool to inspect alignments in detail.

Design a primer

Create a translation

Design a CRISPR guide

Assemble and transform a sequence

Create account

Sign up with GoogleI already have an account
Benchling is actively tested against the latest versions of Chrome, Firefox, Safari, and Edge. **It doesn't look like your current browser is supported** - for more information, [click here](/browsers).
Monospace normal
Monospace bold
Advanced Settings
  • 0 feature results
JGE130_pAAV-CaMKIIa-HA-KORD-IRES-mCitrine "$"
  • Sequence Map
    Editing disabled on read-only sequence.
    cctgcaggcagctgcgcgctcgctcgctcactgaggccgcccgggcaaagcccgggcgtcgggcgacctttggtcgcccggcctcagtgagcgagcgagcgcgcagagagggagtggccaactccatcactaggggttcctgcggccgcacgcgtttaacattatggccttaggtggacgtccgtcgacgcgcgagcgagcgagtgactccggcgggcccgtttcgggcccgcagcccgctggaaaccagcgggccggagtcactcgctcgctcgcgcgtctctccctcaccggttgaggtagtgatccccaaggacgccggcgtgcgcaaattgtaataccggaatccaMluISbfIL-ITRCAMKIIa\(3.1)AAVbb ...LPo 120406080100120140160
    cacttcatctccatggggttcttcttctgattttctagaaaatgagatgggggtgcagagagcttcctcagtgacctgcccagggtcacatcagaaatgtcagagctagaacttgaactcagattactaatcttaaattccatgccttgggggcatgcaagtacgatatacagaagtgaagtagaggtaccccaagaagaagactaaaagatcttttactctacccccacgtctctcgaaggagtcactggacgggtcccagtgtagtctttacagtctcgatcttgaacttgagtctaatgattagaatttaaggtacggaacccccgtacgttcatgctatatgtcttPsrISphIXbaICAMKIIa\(3.1)180200220240260280300320340
    ggagtgaactcattagggcagatgaccaatgagtttaggaaagaagagtccagggcagggtacatctacaccacccgcccagccctgggtgagtccagccacgttcacctcattatagttgcctctctccagtcctaccttgacgggaagcacaagcagaaactgggacaggagccctcacttgagtaatcccgtctactggttactcaaatcctttcttctcaggtcccgtcccatgtagatgtggtgggcgggtcgggacccactcaggtcggtgcaagtggagtaatatcaacggagagaggtcaggatggaactgcccttcgtgttcgtctttgaccctgtcctcgCAMKIIa\(3.1)360380400420440460480500520
    cccaggagaccaaatcttcatggtccctctgggaggatgggtggggagagctgtggcagaggcctcaggaggggccctgctgctcagtggtgacagataggggtgagaaagcagacagagtcattccgtcagcattctgggtctgtttggtacttcttctcacgctaaggtggcggggtcctctggtttagaagtaccagggagaccctcctacccacccctctcgacaccgtctccggagtcctccccgggacgacgagtcaccactgtctatccccactctttcgtctgtctcagtaaggcagtcgtaagacccagacaaaccatgaagaagagtgcgattccaccgcStuIEcoNIPflFITth111ICAMKIIa\(3.1)540560580600620640660680700
    gtgtgatatgcacaatggctaaaaagcagggagagctggaaagaaacaaggacagagacagaggccaagtcaaccagaccaattcccagaggaagcaaagaaaccattacagagactacaagggggaagggaaggagagatgaattagcttcccctgtaaaccttagaacccagccacactatacgtgttaccgatttttcgtccctctcgacctttctttgttcctgtctctgtctccggttcagttggtctggttaagggtctccttcgtttctttggtaatgtctctgatgttcccccttcccttcctctctacttaatcgaaggggacatttggaatcttgggtcgHincIICAMKIIa\(3.1)720740760780800820840860
    tgttgccagggcaacggggcaatacctgtctcttcagaggagatgaagttgccagggtaactacatcctgtctttctcaaggaccatcccagaatgtggcacccactagccgttaccatagcaactgcctctttgccccacttaatcccatcccgtctgttaaaagggccctataacaacggtcccgttgccccgttatggacagagaagtctcctctacttcaacggtcccattgatgtaggacagaaagagttcctggtagggtcttacaccgtgggtgatcggcaatggtatcgttgacggagaaacggggtgaattagggtagggcagacaattttcccgggatatCAMKIIa\(3.1)8809009209409609801,0001,0201,040
    gttggaggtgggggaggtaggaagagcgatgatcacttgtggactaagtttgttcgcatccccttctccaaccccctcagtacatcaccctgggggaacagggtccacttgctcctgggcccacacagtcctgcagtattgtgtatataaggccagggcaaagaggagcaggtttcaacctccaccccctccatccttctcgctactagtgaacacctgattcaaacaagcgtaggggaagaggttgggggagtcatgtagtgggacccccttgtcccaggtgaacgaggacccgggtgtgtcaggacgtcataacacatatattccggtcccgtttctcctcgtccaaaBclISapIBspQICAMKIIa\(3.1)1,0601,0801,1001,1201,1401,1601,1801,2001,220
    taaagtgaaaggcaggcaggtgttggggaggcagttaccggggcaacgggaacagggcgtttcggaggtggttgccatggggacctggatgctgacgaaggctcgcgaggctgtgagcagccacagtgccctgctcagaagccccaagctcgtcagtcaagccggttctccgtttatttcactttccgtccgtccacaacccctccgtcaatggccccgttgcccttgtcccgcaaagcctccaccaacggtacccctggacctacgactgcttccgagcgctccgacactcgtcggtgtcacgggacgagtcttcggggttcgagcagtcagttcggccaagaggcaaaNruIPaqCIPpuMICAMKIIa\(3.1)1,2401,2601,2801,3001,3201,3401,3601,3801,400
    gcactcaggagcacgggcaggcgagtggcccctagttctgggggcagctctagagcggtaccggatccgccaccatgtacccatacgatgttccagattacgctatggaatccccgattcagatcttccgcggggagccgggccctacctgcgccccgagcgcctgcctgccccccgtgagtcctcgtgcccgtccgctcaccggggatcaagacccccgtcgagatctcgccatggcctaggcggtggtacatgggtatgctacaaggtctaatgcgataccttaggggctaagtctagaaggcgcccctcggcccgggatggacgcggggctcgcggacggacgggggKpnIXbaIBamHIBsaBISacIIAcc65IM1Y2P3Y4D5V6P7D8Y9A101475-1504ME2SP4IQ6IF8RG10EP12GP14TC16AP18SA20CL22PP241505-2647HA-KOR-DCAMKIIa\(3.1)HA Tag1,4201,4401,4601,4801,5001,5201,5401,560
    caacagcagcgcctggtttcccggctgggccgagcccgacagcaacggcagcgccggctcggaggacgcgcagctggagcccgcgcacatctccccggccatcccggtcatcatcacggcggtctactccgtagtgttcgtcgtgggcttggtgggcaactcgctggtcatgttcgttgtcgtcgcggaccaaagggccgacccggctcgggctgtcgttgccgtcgcggccgagcctcctgcgcgtcgacctcgggcgcgtgtagaggggccggtagggccagtagtagtgccgccagatgaggcatcacaagcagcacccgaaccacccgttgagcgaccagtacaagAccINS26SA28WF30PG32WA34EP36DS38NG40SA42GS44ED46AQ48LE50PA52HI54SP56AI58PV60II62TA64VY66SV68VF70VV72GL74VG76NS78LV80MF821505-2647HA-KOR-D1,5801,6001,6201,6401,6601,6801,7001,7201,740
    gtgatcatccgatacacaaagatgaagacagcaaccaacatttacatatttaacctggctttggcagatgctttagttactacaaccatgccctttcagagtacggtctacttgatgaattcctggccttttggggatgtgctgtgcaagatagtaatttccattaattactacacactagtaggctatgtgtttctacttctgtcgttggttgtaaatgtataaattggaccgaaaccgtctacgaaatcaatgatgttggtacgggaaagtctcatgccagatgaactacttaaggaccggaaaacccctacacgacacgttctatcattaaaggtaattaatgatgtAccIAseIBclIEcoRIVI84IR86YT88KM90KT92AT94NI96YI98FN100LA102LA104DA106LV108TT110TM112PF114QS116TV118YL120MN122SW124PF126GD128VL130CK132IV134IS136IN138YY1401505-2647HA-KOR-D1,7601,7801,8001,8201,8401,8601,8801,9001,920
    acatgttcaccagcatcttcaccttgaccatgatgagcgtggaccgctacattgccgtgtgccaccccgtgaaggctttggacttccgcacacccttgaaggcaaagatcatcaatatctgcatctggctgctgtcgtcatctgttggcatctctgcaatagtccttggaggcactgtacaagtggtcgtagaagtggaactggtactactcgcacctggcgatgtaacggcacacggtggggcacttccgaaacctgaaggcgtgtgggaacttccgtttctagtagttatagacgtagaccgacgacagcagtagacaaccgtagagacgttatcaggaacctccgtgXcmINM142FT144SI146FT148LT150MM152SV154DR156YI158AV160CH162PV164KA166LD168FR170TP172LK174AK176II178NI180CI182WL184LS186SS188VG190IS192AI194VL196GG198T1505-2647HA-KOR-D1,9401,9601,9802,0002,0202,0402,0602,0802,100
    caaagtcagggaagacgtcgatgtcattgagtgctccttgcagttcccagatgatgactactcctggtgggacctcttcatgaagatctgcgtcttcatctttgccttcgtgatccctgtcctcatcatcatcgtctgctacaccctgatgatcctgcgtctcaagagcgtccgggtttcagtcccttctgcagctacagtaactcacgaggaacgtcaagggtctactactgatgaggaccaccctggagaagtacttctagacgcagaagtagaaacggaagcactagggacaggagtagtagtagcagacgatgtgggactactaggacgcagagttctcgcaggccPpuMIK200VR202ED204VD206VI208EC210SL212QF214PD216DD218YS220WW222DL224FM226KI228CV230FI232FA234FV236IP238VL240II242IV244CY246TL248MI250LR252LK254SV256R1505-2647HA-KOR-D2,1202,1402,1602,1802,2002,2202,2402,260
    ctcctttctggctcccgagagaaagatcgcaacctgcgtaggatcaccagactggtcctggtggtggtggcagtcttcgtcgtctgctggactcccattcacatattcatcctggtggaggctctggggagcacctcccacagcacagctgctctctccagctattacttctgcagaggaaagaccgagggctctctttctagcgttggacgcatcctagtggtctgaccaggaccaccaccaccgtcagaagcagcagacgacctgagggtaagtgtataagtaggaccacctccgagacccctcgtggagggtgtcgtgtcgacgagagaggtcgataatgaagacgtXcmIEcoNIL258LS260GS262RE264KD266RN268LR270RI272TR274LV276LV278VV280AV282FV284VC286WT288PI290HI292FI294LV296EA298LG300ST302SH304ST306AA308LS310SY312YF314C1505-2647HA-KOR-D2,2802,3002,3202,3402,3602,3802,4002,4202,440
    tcgccttaggctataccaacagtagcctgaatcccattctctacgcctttcttgatgaaaacttcaagcggtgtttccgggacttctgctttccactgaagatgaggatggagcggcagagcactagcagagtccgaaatacagttcaggatcctgcttacctgagggacatcgaagcggaatccgatatggttgtcatcggacttagggtaagagatgcggaaagaactacttttgaagttcgccacaaaggccctgaagacgaaaggtgacttctactcctacctcgccgtctcgtgatcgtctcaggctttatgtcaagtcctaggacgaatggactccctgtagctBamHII316AL318GY320TN322SS324LN326PI328LY330AF332LD334EN336FK338RC340FR342DF344CF346PL348KM350RM352ER354QS356TS358RV360RN362TV364QD366PA368YL370RD372ID3741505-2647HA-KOR-D2,4602,4802,5002,5202,5402,5602,5802,6002,620
    tgggatgaataaaccagtatgagcggccgcgatatcgcccctctccctcccccccccctaacgttactggccgaagccgcttggaataaggccggtgtgcgtttgtctatatgttattttccaccatattgccgtcttttggcaatgtgagggcccggaaacctggccctgtcttaccctacttatttggtcatactcgccggcgctatagcggggagagggaggggggggggattgcaatgaccggcttcggcgaaccttattccggccacacgcaaacagatatacaataaaaggtggtataacggcagaaaaccgttacactcccgggcctttggaccgggacagaaEcoRVAA2AI4SP6LS8LP10PP12*R14YW16PK18PL20GI22RP24VC26VC28LY30VI32FH34HI36AV38FW40QC42EG44PE46TW48PC50L2648-3145GM376NK378PV380*1505-2647IRESHA-KOR-D2,6402,6602,6802,7002,7202,7402,7602,7802,800
    cttgacgagcattcctaggggtctttcccctctcgccaaaggaatgcaaggtctgttgaatgtcgtgaaggaagcagttcctctggaagcttcttgaagacaaacaacgtctgtagcgaccctttgcaggcagcggaaccccccacctggcgacaggtgcctctgcggccaaaaggaactgctcgtaaggatccccagaaaggggagagcggtttccttacgttccagacaacttacagcacttccttcgtcaaggagaccttcgaagaacttctgtttgttgcagacatcgctgggaaacgtccgtcgccttggggggtggaccgctgtccacggagacgccggttttcXmnIAvrIIHindIIIL52DE54HS56*G58SF60PS62RQ64RN66AR68SV70EC72RE74GS76SS78SG80SF82LK84TN86NV88CS90DP92LQ94AA96EP98PT100WR102QV104PL106RP108K2648-3145IRES2,8202,8402,8602,8802,9002,9202,9402,960
    ccacgtgtataagatacacctgcaaaggcggcacaaccccagtgccacgttgtgagttggatagttgtggaaagagtcaaatggctctcctcaagcgtattcaacaaggggctgaaggatgcccagaaggtaccccattgtatgggatctgatctggggcctcggtgcacatgctggtgcacatattctatgtggacgtttccgccgtgttggggtcacggtgcaacactcaacctatcaacacctttctcagtttaccgagaggagttcgcataagttgttccccgacttcctacgggtcttccatggggtaacataccctagactagaccccggagccacgtgtacgaKpnIPmlIPaqCIAcc65IA110TC112IR114YT116CK118GG120TT122PV124PR126CE128LD130SC132GK134SQ136MA138LL140KR142IQ144QG146AE148GC150PE152GT154PL156YG158I*160SG162AS164VH1662648-3145ML2IRES2,9803,0003,0203,0403,0603,0803,1003,1203,140
    ttacatgtgtttagtcgaggttaaaaaaacgtctaggccccccgaaccacggggacgtggttttcctttgaaaaacacgatgataagccaccatggtgagcaagggcgaggagctgttcaccggggtggtgcccatcctggtcgagctggacggcgacgtaaacggccacaagttaatgtacacaaatcagctccaatttttttgcagatccggggggcttggtgcccctgcaccaaaaggaaactttttgtgctactattcggtggtaccactcgttcccgctcctcgacaagtggccccaccacgggtaggaccagctcgacctgccgctgcatttgccggtgttcaaBmgBIYM4CL6VE8VK10KT12SR14PP16EP18RG20RG22FP24LK26NT28MI30SH32HG34EQ36GR38GA40VH42RG44GA46HP48GR50AG52RR54RK56RP58QV603146-3991mCItrine3,1603,1803,2003,2203,2403,2603,2803,3003,320
    cagcgtgtccggcgagggcgagggcgatgccacctacggcaagctgaccctgaagttcatctgcaccaccggcaagctgcccgtgccctggcccaccctcgtgaccaccttcggctacggcctgatgtgcttcgcccgctaccccgaccacatgaagcagcacgacttcttcaaggtcgcacaggccgctcccgctcccgctacggtggatgccgttcgactgggacttcaagtagacgtggtggccgttcgacgggcacgggaccgggtgggagcactggtggaagccgatgccggactacacgaagcgggcgatggggctggtgtacttcgtcgtgctgaagaagttcQR62VR64RG66RG68RC70HL72RQ74AD76PE78VH80LH82HR84QA86AR88AL90AH92PR94DH96LR98LR100PD102VL104RP106LP108RP110HE112AA114RL116LQ1183146-3991mCItrine3,3403,3603,3803,4003,4203,4403,4603,4803,500
    tccgccatgcccgaaggctacgtccaggagcgcaccatcttcttcaaggacgacggcaactacaagacccgcgccgaggtgaagttcgagggcgacaccctggtgaaccgcatcgagctgaagggcatcgacttcaaggaggacggcaacatcctggggcacaagctggagtacaaggcggtacgggcttccgatgcaggtcctcgcgtggtagaagaagttcctgctgccgttgatgttctgggcgcggctccacttcaagctcccgctgtgggaccacttggcgtagctcgacttcccgtagctgaagttcctcctgccgttgtaggaccccgtgttcgacctcatgtVR120HA122RR124LR126PG128AH130HL132LQ134GR136RQ138LQ140DP142RR144GE146VR148GR150HP152GE154PH156RA158EG160HR162LQ164GG166RQ168HP170GA172QA174GV176Q3146-3991mCItrine3,5203,5403,5603,5803,6003,6203,6403,660
    actacaacagccacaacgtctatatcatggccgacaagcagaagaacggcatcaaggtgaacttcaagatccgccacaacatcgaggacggcagcgtgcagctcgccgaccactaccagcagaacacccccatcggcgacggccccgtgctgctgcccgacaaccactacctgagtgatgttgtcggtgttgcagatatagtaccggctgttcgtcttcttgccgtagttccacttgaagttctaggcggtgttgtagctcctgccgtcgcacgtcgagcggctggtgatggtcgtcttgtgggggtagccgctgccggggcacgacgacgggctgttggtgatggactcL178QQ180PQ182RL184YH186GR188QA190EE192RH194QG196EL198QD200PP202QH204RG206RQ208RA210AR212RP214LP216AE218HP220HR222RR224PR226AA228AR230QP232LP234E3146-3991mCItrine3,6803,7003,7203,7403,7603,7803,8003,8203,840
    ctaccagtccaaactgagcaaagaccccaacgagaagcgcgatcacatggtcctgctggagttcgtgaccgccgccgggatcactctcggcatggacgagctgtacaagtgataggaattcgatatcaagcttatcgataatcaacctctggattacaaaatttgtgaaagattggatggtcaggtttgactcgtttctggggttgctcttcgcgctagtgtaccaggacgacctcaagcactggcggcggccctagtgagagccgtacctgctcgacatgttcactatccttaagctatagttcgaatagctattagttggagacctaatgttttaaacactttctaacBsrGIEcoRIEcoRVHindIIIL236PV238QT240EQ242RP244QR246EA248RS250HG252PA254GV256RD258RR260RD262HS264RH266GR268AV270QV272IG274IR276YQ278AY280R*2823146-3991mCItrineWPREAAVbb for FLPo23,8603,8803,9003,9203,9403,9603,9804,0004,020
    actggtattcttaactatgttgctccttttacgctatgtggatacgctgctttaatgcctttgtatcatgctattgcttcccgtatggctttcattttctcctccttgtataaatcctggttgctgtctctttatgaggagttgtggcccgttgtcaggcaacgtggcgtggtgttgaccataagaattgatacaacgaggaaaatgcgatacacctatgcgacgaaattacggaaacatagtacgataacgaagggcataccgaaagtaaaagaggaggaacatatttaggaccaacgacagagaaatactcctcaacaccgggcaacagtccgttgcaccgcaccacaWPRE4,0404,0604,0804,1004,1204,1404,1604,1804,200
    gcactgtgtttgctgacgcaacccccactggttggggcattgccaccacctgtcagctcctttccgggactttcgctttccccctccctattgccacggcggaactcatcgccgcctgccttgcccgctgctggacaggggctcggctgttgggcactgacaattccgtggtgttcgtgacacaaacgactgcgttgggggtgaccaaccccgtaacggtggtggacagtcgaggaaaggccctgaaagcgaaagggggagggataacggtgccgccttgagtagcggcggacggaacgggcgacgacctgtccccgagccgacaacccgtgactgttaaggcaccacaaWPRE4,2204,2404,2604,2804,3004,3204,3404,360
    gtcggggaaatcatcgtcctttccttggctgctcgcctgtgttgccacctggattctgcgcgggacgtccttctgctacgtcccttcggccctcaatccagcggaccttccttcccgcggcctgctgccggctctgcggcctcttccgcgtcttcgccttcgccctcagacgagtcagcccctttagtagcaggaaaggaaccgacgagcggacacaacggtggacctaagacgcgccctgcaggaagacgatgcagggaagccgggagttaggtcgcctggaaggaagggcgccggacgacggccgagacgccggagaaggcgcagaagcggaagcgggagtctgctcaSacIIWPRE4,3804,4004,4204,4404,4604,4804,5004,5204,540
    cggatctccctttgggccgcctccccgcatcgataccgagcgctgctcgagagatctacgggtggcatccctgtgacccctccccagtgcctctcctggccctggaagttgccactccagtgcccaccagccttgtcctaataaaattaagttgcatcattttgtctgactaggtgcctagagggaaacccggcggaggggcgtagctatggctcgcgacgagctctctagatgcccaccgtagggacactggggaggggtcacggagaggaccgggaccttcaacggtgaggtcacgggtggtcggaacaggattattttaattcaacgtagtaaaacagactgatccaAfeIBplIBplITliIXhoICspCIPaeR7IhGH\PolyAWPRE4,5604,5804,6004,6204,6404,6604,6804,7004,720
    gtccttctataatattatggggtggaggggggtggtatggagcaaggggcaagttgggaagacaacctgtagggcctgcggggtctattgggaaccaagctggagtgcagtggcacaatcttggctcactgcaatctccgcctcctgggttcaagcgattctcctgcctcagcctcaggaagatattataataccccacctccccccaccatacctcgttccccgttcaacccttctgttggacatcccggacgccccagataacccttggttcgacctcacgtcaccgtgttagaaccgagtgacgttagaggcggaggacccaagttcgctaagaggacggagtcggaBbvCIhGH\PolyA4,7404,7604,7804,8004,8204,8404,8604,8804,900
    cccgagttgttgggattccaggcatgcatgaccaggctcagctaatttttgtttttttggtagagacggggtttcaccatattggccaggctggtctccaactcctaatctcaggtgatctacccaccttggcctcccaaattgctgggattacaggcgtgaaccactgctccctgggctcaacaaccctaaggtccgtacgtactggtccgagtcgattaaaaacaaaaaaaccatctctgccccaaagtggtataaccggtccgaccagaggttgaggattagagtccactagatgggtggaaccggagggtttaacgaccctaatgtccgcacttggtgacgagggaAloIBlpINsiISphIBstXIhGH\PolyA4,9204,9404,9604,9805,0005,0205,0405,060
    tccctgtccttctgattttgtaggtaaccacgtgcggaccgagcggccgcaggaacccctagtgatggagttggccactccctctctgcgcgctcgctcgctcactgaggccgggcgaccaaaggtcgcccgacgcccgggctttgcccgggcggcctcagtgagcgagcgagcgagggacaggaagactaaaacatccattggtgcacgcctggctcgccggcgtccttggggatcactacctcaaccggtgagggagagacgcgcgagcgagcgagtgactccggcccgctggtttccagcgggctgcgggcccgaaacgggcccgccggagtcactcgctcgctcgcPmlIRsrIIBstEIIR-ITRERROR 1?hG...A5,0805,1005,1205,1405,1605,1805,2005,2205,240
    cgcagctgcctgcaggggcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatacgtcaaagcaaccatagtacgcgccctgtagcggcgcattaagcgcggcgggtgtggtggttacgcgcagcgtgaccgctacacttgccagcgccctagcgccgcgtcgacggacgtccccgcggactacgccataaaagaggaatgcgtagacacgccataaagtgtggcgtatgcagtttcgttggtatcatgcgcgggacatcgccgcgtaattcgcgccgcccacaccaccaatgcgcgtcgcactggcgatgtgaacggtcgcgggatcgcggKasINarISbfISfoIPluTIF1\OriginR-ITR5,2605,2805,3005,3205,3405,3605,3805,4005,420
    cgctcctttcgctttcttcccttcctttctcgccacgttcgccggctttccccgtcaagctctaaatcgggggctccctttagggttccgatttagtgctttacggcacctcgaccccaaaaaacttgatttgggtgatggttcacgtagtgggccatcgccctgatagacggttgcgaggaaagcgaaagaagggaaggaaagagcggtgcaagcggccgaaaggggcagttcgagatttagcccccgagggaaatcccaaggctaaatcacgaaatgccgtggagctggggttttttgaactaaacccactaccaagtgcatcacccggtagcgggactatctgccaaF1\Origin5,4405,4605,4805,5005,5205,5405,5605,5805,600
    tttcgccctttgacgttggagtccacgttctttaatagtggactcttgttccaaactggaacaacactcaaccctatctcgggctattcttttgatttataagggattttgccgatttcggcctattggttaaaaaatgagctgatttaacaaaaatttaacgcgaattttaacaaaagcgggaaactgcaacctcaggtgcaagaaattatcacctgagaacaaggtttgaccttgttgtgagttgggatagagcccgataagaaaactaaatattccctaaaacggctaaagccggataaccaattttttactcgactaaattgtttttaaattgcgcttaaaattgtAloIPsiIF1\Origin5,6205,6405,6605,6805,7005,7205,7405,760
    aaatattaacgtttacaattttatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcatttataattgcaaatgttaaaataccacgtgagagtcatgttagacgagactacggcgtatcaattcggtcggggctgtgggcggttgtgggcgactgcgcgggactgcccgaacagacgagggccgtaggcgaatgtctgttcgacactggcagaggccctcgacgtacacagt5,7805,8005,8205,8405,8605,8805,9005,9205,940
    gaggttttcaccgtcatcaccgaaacgcgcgagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatggtttcttagacgtcaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatatgtatctccaaaagtggcagtagtggctttgcgcgctctgctttcccggagcactatgcggataaaaatatccaattacagtactattattaccaaagaatctgcagtccaccgtgaaaagcccctttacacgcgccttggggataaacaaataaaaagatttatgtaagtttatacata5,9605,9806,0006,0206,0406,0606,0806,1006,120
    ccgctcatgagacaataaccctgataaatgcttcaataatattgaaaaaggaagagtatgagtattcaacatttccgtgtcgcccttattcccttttttgcggcattttgccttcctgtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgggcgagtactctgttattgggactatttacgaagttattataactttttccttctcatactcataagttgtaaaggcacagcgggaataagggaaaaaacgccgtaaaacggaaggacaaaaacgagtgggtctttgcgaccactttcattttctacgacttctagtcaacccacAmpR6,1406,1606,1806,2006,2206,2406,2606,2806,300
    cacgagtgggttacatcgaactggatctcaacagcggtaagatccttgagagttttcgccccgaagaacgttttccaatgatgagcacttttaaagttctgctatgtggcgcggtattatcccgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaagtgctcacccaatgtagcttgacctagagttgtcgccattctaggaactctcaaaagcggggcttcttgcaaaaggttactactcgtgaaaatttcaagacgatacaccgcgccataatagggcataactgcggcccgttctcgttgagccagcggcgtatgtgataagagtcttXmnIAmpR6,3206,3406,3606,3806,4006,4206,4406,460
    tgacttggttgagtactcaccagtcacagaaaagcatcttacggatggcatgacagtaagagaattatgcagtgctgccataaccatgagtgataacactgcggccaacttacttctgacaacgatcggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatactgaaccaactcatgagtggtcagtgtcttttcgtagaatgcctaccgtactgtcattctcttaatacgtcacgacggtattggtactcactattgtgacgccggttgaatgaagactgttgctagcctcctggcttcctcgattggcgaaaaaacgtgttgtaccccctagtaPvuIScaIAmpR6,4806,5006,5206,5406,5606,5806,6006,6206,640
    gtaactcgccttgatcgttgggaaccggagctgaatgaagccataccaaacgacgagcgtgacaccacgatgcctgtagcaatggcaacaacgttgcgcaaactattaactggcgaactacttactctagcttcccggcaacaattaatagactggatggaggcggataaagttgcattgagcggaactagcaacccttggcctcgacttacttcggtatggtttgctgctcgcactgtggtgctacggacatcgttaccgttgttgcaacgcgtttgataattgaccgcttgatgaatgagatcgaagggccgttgttaattatctgacctacctccgcctatttcaacAseIFspIAmpR6,6606,6806,7006,7206,7406,7606,7806,8006,820
    caggaccacttctgcgctcggcccttccggctggctggtttattgctgataaatctggagccggtgagcgtgggtctcgcggtatcattgcagcactggggccagatggtaagccctcccgtatcgtagttatctacacgacggggagtcaggcaactatggatgaacgaaataggtcctggtgaagacgcgagccgggaaggccgaccgaccaaataacgactatttagacctcggccactcgcacccagagcgccatagtaacgtcgtgaccccggtctaccattcgggagggcatagcatcaatagatgtgctgcccctcagtccgttgatacctacttgctttatcAmpR6,8406,8606,8806,9006,9206,9406,9606,9807,000
    acagatcgctgagataggtgcctcactgattaagcattggtaactgtcagaccaagtttactcatatatactttagattgatttaaaacttcatttttaatttaaaaggatctaggtgaagatcctttttgataatctcatgaccaaaatcccttaacgtgagttttcgttccactgtctagcgactctatccacggagtgactaattcgtaaccattgacagtctggttcaaatgagtatatatgaaatctaactaaattttgaagtaaaaattaaattttcctagatccacttctaggaaaaactattagagtactggttttagggaattgcactcaaaagcaaggtgAmpR7,0207,0407,0607,0807,1007,1207,1407,160
    tgagcgtcagaccccgtagaaaagatcaaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaaaaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagatacactcgcagtctggggcatcttttctagtttcctagaagaactctaggaaaaaaagacgcgcattagacgacgaacgtttgtttttttggtggcgatggtcgccaccaaacaaacggcctagttctcgatggttgagaaaaaggcttccattgaccgaagtcgtctcgcgtctatgpUC\Ori7,1807,2007,2207,2407,2607,2807,3007,3207,340
    caaatactgtccttctagtgtagccgtagttaggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctgttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgtttatgacaggaagatcacatcggcatcaatccggtggtgaagttcttgagacatcgtggcggatgtatggagcgagacgattaggacaatggtcaccgacgacggtcaccgctattcagcacagaatggcccaacctgagttctgctatcaatggcctattccgcgtcgccagpUC\Ori7,3607,3807,4007,4207,4407,4607,4807,5007,520
    gggctgaacggggggttcgtgcacacagcccagcttggagcgaacgacctacaccgaactgagatacctacagcgtgagctatgagaaagcgccacgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggagagcgcacgagggagcttccacccgacttgccccccaagcacgtgtgtcgggtcgaacctcgcttgctggatgtggcttgactctatggatgtcgcactcgatactctttcgcggtgcgaagggcttccctctttccgcctgtccataggccattcgccgtcccagccttgtcctctcgcgtgctccctcgaaggtpUC\Ori7,5407,5607,5807,6007,6207,6407,6607,6807,700
    gggggaaacgcctggtatctttatagtcctgtcgggtttcgccacctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctatggaaaaacgccagcaacgcggcctttttacggttcctggccttttgctggccttttgctcacatgtccccctttgcggaccatagaaatatcaggacagcccaaagcggtggagactgaactcgcagctaaaaacactacgagcagtccccccgcctcggatacctttttgcggtcgttgcgccggaaaaatgccaaggaccggaaaacgaccggaaaacgagtgtacapUC\Ori7,7207,7407,7607,7807,8007,8207,8407,860
    • Plasmid
    • Relevant Items
    • Metadata
    • Description
    • Linear Map
    Editing disabled on read-only sequence.
    7863 bp5500600065007000750050010001500HA-KOR-D1475-15041505-2647

    Welcome to Benchling!

    Sign in to view data.

    New digest

    Saved digests

    Enzyme AatII
    Enzyme lists
    Cut sites visible on maps
    Find enzyme
    Clear selected
    Name Cuts
    Selected Color
    Show enzymes that cut

    Primers

    Pairs

    Create Primers
    Attach Existing
    Detach All Primers
    Primer Position Product Size

    History

    Lineage

     Show Full History
    Change User Timestamp

    Sequence Alignments

    Create New Alignment
    Saved Alignments

    Sequence Info

    Tags

    Name
    Parent Version
    Folder
    Topology
    Start Index
    Locked
    Created
    --
    Length
    --
    Export Data
    Download
    Split Workspace
    Bases
    7863