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pLenti6.3/V5-HA-hM3D(Gq)-mCherry
  • Sequence Map
    Editing disabled on read-only sequence.
    aatgtagtcttatgcaatactcttgtagtcttgcaacatggtaacgatgagttagcaacatgccttacaaggagagaaaaagcaccgtgcatgccgattggtggaagtaaggtggtacgatcgtgccttattaggaaggcaacagacgggtctgacatggattggacgaaccactttacatcagaatacgttatgagaacatcagaacgttgtaccattgctactcaatcgttgtacggaatgttcctctctttttcgtggcacgtacggctaaccaccttcattccaccatgctagcacggaataatccttccgttgtctgcccagactgtacctaacctgcttggtgaBaeIRSV promoterpRSV/5'LTR20406080100120140160
    gaattgccgcattgcagagatattgtatttaagtgcctagctcgatacataaacgggtctctctggttagaccagatctgagcctgggagctctctggctaactagggaacccactgcttaagcctcaataaagcttgccttgagtgcttcaagtagtgtgtgcccgtctgttgtcttaacggcgtaacgtctctataacataaattcacggatcgagctatgtatttgcccagagagaccaatctggtctagactcggaccctcgagagaccgattgatcccttgggtgacgaattcggagttatttcgaacggaactcacgaagttcatcacacacgggcagacaacapRSV/5'LTRHIV-1 5' LTRRSV promoter180200220240260280300320340
    gtgactctggtaactagagatccctcagacccttttagtcagtgtggaaaatctctagcagtggcgcccgaacagggacttgaaagcgaaagggaaaccagaggagctctctcgacgcaggactcggcttgctgaagcgcgcacggcaagaggcgaggggcggcgactggtgagtcactgagaccattgatctctagggagtctgggaaaatcagtcacaccttttagagatcgtcaccgcgggcttgtccctgaactttcgctttccctttggtctcctcgagagagctgcgtcctgagccgaacgacttcgcgcgtgccgttctccgctccccgccgctgaccactcapRSV/5'LTRHIV-1 5' LTR360380400420440460480500520
    acgccaaaaattttgactagcggaggctagaaggagagagatgggtgcgagagcgtcagtattaagcgggggagaattagatcgcgatgggaaaaaattcggttaaggccagggggaaagaaaaaatataaattaaaacatatagtatgggcaagcagggagctagaacgattcgtgcggtttttaaaactgatcgcctccgatcttcctctctctacccacgctctcgcagtcataattcgccccctcttaatctagcgctacccttttttaagccaattccggtccccctttcttttttatatttaattttgtatatcatacccgttcgtccctcgatcttgctaagcNruIXmnIHIV-1 psi packaging signal540560580600620640660680700
    cagttaatcctggcctgttagaaacatcagaaggctgtagacaaatactgggacagctacaaccatcccttcagacaggatcagaagaacttagatcattatataatacagtagcaaccctctattgtgtgcatcaaaggatagagataaaagacaccaaggaagctttagacaagtcaattaggaccggacaatctttgtagtcttccgacatctgtttatgaccctgtcgatgttggtagggaagtctgtcctagtcttcttgaatctagtaatatattatgtcatcgttgggagataacacacgtagtttcctatctctattttctgtggttccttcgaaatctgtt720740760780800820840860
    gatagaggaagagcaaaacaaaagtaagaccaccgcacagcaagcggccgctgatcttcagacctggaggaggagatatgagggacaattggagaagtgaattatataaatataaagtagtaaaaattgaaccattaggagtagcacccaccaaggcaaagagaagagtggtgcactatctccttctcgttttgttttcattctggtggcgtgtcgttcgccggcgactagaagtctggacctcctcctctatactccctgttaacctcttcacttaatatatttatatttcatcatttttaacttggtaatcctcatcgtgggtggttccgtttctcttctcaccacgtMfeINotI8809009209409609801,0001,0201,040
    gagagaaaaaagagcagtgggaataggagctttgttccttgggttcttgggagcagcaggaagcactatgggcgcagcgtcaatgacgctgacggtacaggccagacaattattgtctggtatagtgcagcagcagaacaatttgctgagggctattgaggcgcaacagcatctgctctcttttttctcgtcacccttatcctcgaaacaaggaacccaagaaccctcgtcgtccttcgtgatacccgcgtcgcagttactgcgactgccatgtccggtctgttaataacagaccatatcacgtcgtcgtcttgttaaacgactcccgataactccgcgttgtcgtagacBbvCIBpu10IRRE1,0601,0801,1001,1201,1401,1601,1801,2001,220
    ttgcaactcacagtctggggcatcaagcagctccaggcaagaatcctggctgtggaaagatacctaaaggatcaacagctcctggggatttggggttgctctggaaaactcatttgcaccactgctgtgccttggaatgctagttggagtaataaatctctggaacagattggaaaacgttgagtgtcagaccccgtagttcgtcgaggtccgttcttaggaccgacacctttctatggatttcctagttgtcgaggacccctaaaccccaacgagaccttttgagtaaacgtggtgacgacacggaaccttacgatcaacctcattatttagagaccttgtctaaccttBsmIBsaBIRRE1,2401,2601,2801,3001,3201,3401,3601,3801,400
    tcacacgacctggatggagtgggacagagaaattaacaattacacaagcttaatacactccttaattgaagaatcgcaaaaccagcaagaaaagaatgaacaagaattattggaattagataaatgggcaagtttgtggaattggtttaacataacaaattggctgtggtatataagtgtgctggacctacctcaccctgtctctttaattgttaatgtgttcgaattatgtgaggaattaacttcttagcgttttggtcgttcttttcttacttgttcttaataaccttaatctatttacccgttcaaacaccttaaccaaattgtattgtttaaccgacaccatatat1,4201,4401,4601,4801,5001,5201,5401,560
    aaattattcataatgatagtaggaggcttggtaggtttaagaatagtttttgctgtactttctatagtgaatagagttaggcagggatattcaccattatcgtttcagacccacctcccaaccccgaggggacccgacaggcccgaaggaatagaagaagaaggtggagagagagtttaataagtattactatcatcctccgaaccatccaaattcttatcaaaaacgacatgaaagatatcacttatctcaatccgtccctataagtggtaatagcaaagtctgggtggagggttggggctcccctgggctgtccgggcttccttatcttcttcttccacctctctctcKflIPpuMI1,5801,6001,6201,6401,6601,6801,7001,7201,740
    acagagacagatccattcgattagtgaacggatctcgacggtatcggttaacttttaaaagaaaaggggggattggggggtacagtgcaggggaaagaatagtagacataatagcaacagacatacaaactaaagaattacaaaaacaaattacaaaaattcaaaattttatcgatgtctctgtctaggtaagctaatcacttgcctagagctgccatagccaattgaaaattttcttttcccccctaaccccccatgtcacgtcccctttcttatcatctgtattatcgttgtctgtatgtttgatttcttaatgtttttgtttaatgtttttaagttttaaaatagctClaIHpaIBspDIcPPT1,7601,7801,8001,8201,8401,8601,8801,9001,920
    taagcttgggagttccgcgttacataacttacggtaaatggcccgcctggctgaccgcccaacgacccccgcccattgacgtcaataatgacgtatgttcccatagtaacgccaatagggactttccattgacgtcaatgggtggagtatttacggtaaactgcccacttggcagattcgaaccctcaaggcgcaatgtattgaatgccatttaccgggcggaccgactggcgggttgctgggggcgggtaactgcagttattactgcatacaagggtatcattgcggttatccctgaaaggtaactgcagttacccacctcataaatgccatttgacgggtgaaccgtcPcmv1,9401,9601,9802,0002,0202,0402,0602,0802,100
    tacatcaagtgtatcatatgccaagtacgccccctattgacgtcaatgacggtaaatggcccgcctggcattatgcccagtacatgaccttatgggactttcctacttggcagtacatctacgtattagtcatcgctattaccatggtgatgcggttttggcagtacatcaatggatgtagttcacatagtatacggttcatgcgggggataactgcagttactgccatttaccgggcggaccgtaatacgggtcatgtactggaataccctgaaaggatgaaccgtcatgtagatgcataatcagtagcgataatggtaccactacgccaaaaccgtcatgtagttaccNdeISnaBIPcmv2,1202,1402,1602,1802,2002,2202,2402,260
    gcgtggatagcggtttgactcacggggatttccaagtctccaccccattgacgtcaatgggagtttgttttggcaccaaaatcaacgggactttccaaaatgtcgtaacaactccgccccattgacgcaaatgggcggtaggcgtgtacggtgggaggtctatataagcagagctcgcacctatcgccaaactgagtgcccctaaaggttcagaggtggggtaactgcagttaccctcaaacaaaaccgtggttttagttgccctgaaaggttttacagcattgttgaggcggggtaactgcgtttacccgccatccgcacatgccaccctccagatatattcgtctcgaPcmv2,2802,3002,3202,3402,3602,3802,4002,4202,440
    cgtttagtgaaccgtcagatcgcctggagacgccatccacgctgttttgacctccatagaagacaccgactctagaggatccactagtggatcctctagagtcgacgccaccatgaccttgcacaataacagtacaacctcgcctttgtttccaaacatcagctcctcctggatagcaaatcacttggcagtctagcggacctctgcggtaggtgcgacaaaactggaggtatcttctgtggctgagatctcctaggtgatcacctaggagatctcagctgcggtggtactggaacgtgttattgtcatgttggagcggaaacaaaggtttgtagtcgaggaggacctatSalISpeIBsmBIEsp3IMT2LH4NN6ST8TS10PL12FP14NI16SS18SW20I2563-4334PcmvhM3D2,4602,4802,5002,5202,5402,5602,5802,6002,620
    cacagcccctccgatgcagggctgcccccgggaaccgtcactcatttcggcagctacaatgtttctcgagcagctggcaatttctcctctccagacggtaccaccgatgaccctctgggaggtcataccgtctggcaagtggtcttcatcgctttcttaacgggcatcctggcctgtgtcggggaggctacgtcccgacgggggcccttggcagtgagtaaagccgtcgatgttacaaagagctcgtcgaccgttaaagaggagaggtctgccatggtggctactgggagaccctccagtatggcagaccgttcaccagaagtagcgaaagaattgcccgtaggaccggaSmaITliIXhoIXmaITspMIPaeR7IH22SP24SD26AG28LP30PG32TV34TH36FG38SY40NV42SR44AA46GN48FS50SP52DG54TT56DD58PL60GG62HT64VW66QV68VF70IA72FL74TG76IL78A2563-4334hM3D2,6402,6602,6802,7002,7202,7402,7602,7802,800
    tggtgaccatcatcggcaacatcctggtaattgtgtcatttaaggtcaacaagcagctgaagacggtcaacaactacttcctcttaagcctggcctgtgccgatctgattatcggggtcatttcaatgaatctgtttacgacctacatcatcatgaatcgatgggccttagggaaaccactggtagtagccgttgtaggaccattaacacagtaaattccagttgttcgtcgacttctgccagttgttgatgaaggagaattcggaccggacacggctagactaatagccccagtaaagttacttagacaaatgctggatgtagtagtacttagctacccggaatcccttClaIBspDIBsu36IL80VT82II84GN86IL88VI90VS92FK94VN96KQ98LK100TV102NN104YF106LL108SL110AC112AD114LI116IG118VI120SM122NL124FT126TY128II130MN132RW134AL136GN1382563-4334hM3D2,8202,8402,8602,8802,9002,9202,9402,960
    cttggcctgtgacctctggcttgccattgactgcgtagccagcaatgcctctgttatgaatcttctggtcatcagctttgacagatacttttccatcacgaggccgctcacgtaccgagccaaacgaacaacaaagagagccggtgtgatgatcggtctggcttgggtcatctccgaaccggacactggagaccgaacggtaactgacgcatcggtcgttacggagacaatacttagaagaccagtagtcgaaactgtctatgaaaaggtagtgctccggcgagtgcatggctcggtttgcttgttgtttctctcggccacactactagccagaccgaacccagtagaggLA140CD142LW144LA146ID148CV150AS152NA154SV156MN158LL160VI162SF164DR166YF168SI170TR172PL174TY176RA178KR180TT182KR184AG186VM188IG190LA192WV194IS1962563-4334hM3D2,9803,0003,0203,0403,0603,0803,1003,1203,140
    tttgtcctttgggctcctgccatcttgttctggcaatactttgttggaaagagaactgtgcctccgggagagtgcttcattcagttcctcagtgagcccaccattacttttggcacagccatcgctggtttttatatgcctgtcaccattatgactattttatactggaggatctaaacaggaaacccgaggacggtagaacaagaccgttatgaaacaacctttctcttgacacggaggccctctcacgaagtaagtcaaggagtcactcgggtggtaatgaaaaccgtgtcggtagcgaccaaaaatatacggacagtggtaatactgataaaatatgacctcctagaBcgIFV198LW200AP202AI204LF206WQ208YF210VG212KR214TV216PP218GE220CF222IQ224FL226SE228PT230IT232FG234TA236IA238GF240YM242PV244TI246MT248IL250YW252RI2542563-4334hM3D3,1603,1803,2003,2203,2403,2603,2803,3003,320
    ataaggaaactgaaaagcgtaccaaagagcttgctggcctgcaagcctctgggacagaggcagagacagaaaactttgtccaccccacgggcagttctcgaagctgcagcagttacgaacttcaacagcaaagcatgaaacgctccaacaggaggaagtatggccgctgccactttattcctttgacttttcgcatggtttctcgaacgaccggacgttcggagaccctgtctccgtctctgtcttttgaaacaggtggggtgcccgtcaagagcttcgacgtcgtcaatgcttgaagttgtcgtttcgtactttgcgaggttgtcctccttcataccggcgacggtgaaYK256ET258EK260RT262KE264LA266GL268QA270SG272TE274AE276TE278NF280VH282PT284GS286SR288SC290SS292YE294LQ296QQ298SM300KR302SN304RR306KY308GR310CH312F2563-4334hM3D3,3403,3603,3803,4003,4203,4403,4603,4803,500
    ctggttcacaaccaagagctggaaacccagctccgagcagatggaccaagaccacagcagcagtgacagttggaacaacaatgatgctgctgcctccctggagaactccgcctcctccgacgaggaggacattggctccgagacgagagccatctactccatcgtgctcaagcttgaccaagtgttggttctcgacctttgggtcgaggctcgtctacctggttctggtgtcgtcgtcactgtcaaccttgttgttactacgacgacggagggacctcttgaggcggaggaggctgctcctcctgtaaccgaggctctgctctcggtagatgaggtagcacgagttcgaaBsmBIEsp3IW314FT316TK318SW320KP322SS324EQ326MD328QD330HS332SS334DS336WN338NN340DA342AA344SL346EN348SA350SS352DE354ED356IG358SE360TR362AI364YS366IV368LK370L2563-4334hM3D3,5203,5403,5603,5803,6003,6203,6403,660
    ccgggtcacagcaccatcctcaactccaccaagttaccctcatcggacaacctgcaggtgcctgaggaggagctggggatggtggacttggagaggaaagccgacaagctgcaggcccagaagagcgtggacgatggaggcagttttccaaaaagcttctccaagcttcccatccggcccagtgtcgtggtaggagttgaggtggttcaatgggagtagcctgttggacgtccacggactcctcctcgacccctaccacctgaacctctcctttcggctgttcgacgtccgggtcttctcgcacctgctacctccgtcaaaaggtttttcgaagaggttcgaagggtaggSbfIBfuAIBfuAIBspMIBspMIPaqCIBsu36IP372GH374ST376IL378NS380TK382LP384SS386DN388LQ390VP392EE394EL396GM398VD400LE402RK404AD406KL408QA410QK412SV414DD416GG418SF420PK422SF424SK426LP428I2563-4334hM3D3,6803,7003,7203,7403,7603,7803,8003,8203,840
    agctagagtcagccgtggacacagctaagacttctgacgtcaactcctcagtgggtaagagcacggccactctacctctgtccttcaaggaagccactctggccaagaggtttgctctgaagaccagaagtcagatcactaagcggaaaaggatgtccctggtcaaggagaagaatcgatctcagtcggcacctgtgtcgattctgaagactgcagttgaggagtcacccattctcgtgccggtgagatggagacaggaagttccttcggtgagaccggttctccaaacgagacttctggtcttcagtctagtgattcgccttttcctacagggaccagttcctcttcttQ430LE432SA434VD436TA438KT440SD442VN444SS446VG448KS450TA452TL454PL456SF458KE460AT462LA464KR466FA468LK470TR472SQ474IT476KR478KR480MS482LV484KE486KK4882563-4334hM3D3,8603,8803,9003,9203,9403,9603,9804,0004,020
    agcggcccagaccctcagtgcgatcttgcttgccttcatcatcacttggaccccatacaacatcatggttctggtgaacaccttttgtgacagctgcatacccaaaaccttttggaatctgggctactggctgtgctacatcaacagcaccgtgaaccccgtgtgctatgctctgtcgccgggtctgggagtcacgctagaacgaacggaagtagtagtgaacctggggtatgttgtagtaccaagaccacttgtggaaaacactgtcgacgtatgggttttggaaaaccttagacccgatgaccgacacgatgtagttgtcgtggcacttggggcacacgatacgagacAA490QT492LS494AI496LL498AF500II502TW504TP506YN508IM510VL512VN514TF516CD518SC520IP522KT524FW526NL528GY530WL532CY534IN536ST538VN540PV542CY544AL5462563-4334hM3D4,0404,0604,0804,1004,1204,1404,1604,1804,200
    tgcaacaaaacattcagaaccactttcaagatgctgctgctgtgccagtgtgacaaaaaaaagaggcgcaagcagcagtaccagcagagacagtcggtcatttttcacaagcgcgcacccgagcaggccttgaaggatcccccggtcgccaccatggtgagcaagggcgaggaggacgttgttttgtaagtcttggtgaaagttctacgacgacgacacggtcacactgttttttttctccgcgttcgtcgtcatggtcgtctctgtcagccagtaaaaagtgttcgcgcgtgggctcgtccggaacttcctagggggccagcggtggtaccactcgttcccgctcctccCN548KT550FR552TT554FK556ML558LL560CQ562CD564KK566KR568RK570QQ572YQ574QR576QS578VI580FH582KR584AP586EQ588AL5902563-4334hM3DmCherry4,2204,2404,2604,2804,3004,3204,3404,360
    ataacatggccatcatcaaggagttcatgcgcttcaaggtgcacatggagggctccgtgaacggccacgagttcgagatcgagggcgagggcgagggccgcccctacgagggcacccagaccgccaagctgaaggtgaccaagggtggccccctgcccttcgcctgggacatccttattgtaccggtagtagttcctcaagtacgcgaagttccacgtgtacctcccgaggcacttgccggtgctcaagctctagctcccgctcccgctcccggcggggatgctcccgtgggtctggcggttcgacttccactggttcccaccgggggacgggaagcggaccctgtaggamCherry4,3804,4004,4204,4404,4604,4804,5004,5204,540
    gtcccctcagttcatgtacggctccaaggcctacgtgaagcaccccgccgacatccccgactacttgaagctgtccttccccgagggcttcaagtgggagcgcgtgatgaacttcgaggacggcggcgtggtgaccgtgacccaggactcctccctgcaggacggcgagttcatccaggggagtcaagtacatgccgaggttccggatgcacttcgtggggcggctgtaggggctgatgaacttcgacaggaaggggctcccgaagttcaccctcgcgcactacttgaagctcctgccgccgcaccactggcactgggtcctgaggagggacgtcctgccgctcaagtagSbfImCherry4,5604,5804,6004,6204,6404,6604,6804,7004,720
    tacaaggtgaagctgcgcggcaccaacttcccctccgacggccccgtaatgcagaagaagaccatgggctgggaggcctcctccgagcggatgtaccccgaggacggcgccctgaagggcgagatcaagcagaggctgaagctgaaggacggcggccactacgacgctgaggtcaatgttccacttcgacgcgccgtggttgaaggggaggctgccggggcattacgtcttcttctggtacccgaccctccggaggaggctcgcctacatggggctcctgccgcgggacttcccgctctagttcgtctccgacttcgacttcctgccgccggtgatgctgcgactccagtBbvCIBpu10ImCherry4,7404,7604,7804,8004,8204,8404,8604,8804,900
    agaccacctacaaggccaagaagcccgtgcagctgcccggcgcctacaacgtcaacatcaagttggacatcacctcccacaacgaggactacaccatcgtggaacagtacgaacgcgccgagggccgccactccaccggcggcatggacgagctgtacaagtaagaattcgatattctggtggatgttccggttcttcgggcacgtcgacgggccgcggatgttgcagttgtagttcaacctgtagtggagggtgttgctcctgatgtggtagcaccttgtcatgcttgcgcggctcccggcggtgaggtggccgccgtacctgctcgacatgttcattcttaagctataXcmIBsrGIEcoRIEcoRVSgrAImCherry4,9204,9404,9604,9805,0005,0205,0405,060
    caagcttatcgactagtggatccgagctcggtaccaagcttaagtttaaaccgctgatcagcctcgactgtgccttctaaagggccaattctgcagatatccagcacagtggcggccgctcgagtctagagggcccgcggttcgaaggtaagcctatccctaaccctctcctcgggttcgaatagctgatcacctaggctcgagccatggttcgaattcaaatttggcgactagtcggagctgacacggaagatttcccggttaagacgtctataggtcgtgtcaccgccggcgagctcagatctcccgggcgccaagcttccattcggatagggattgggagaggagccApaIBclINotIPmeISpeITliIXhoIBstBIBstXIEcoRVPspXISacIIPaeR7IPspOMIV5 epitope5,0805,1005,1205,1405,1605,1805,2005,2205,240
    tctcgattctacgcgtaccggttagtaatgatcgacaatcaacctctggattacaaaatttgtgaaagattgactggtattcttaactatgttgctccttttacgctatgtggatacgctgctttaatgcctttgtatcatgctattgcttcccgtatggctttcattttctcctagagctaagatgcgcatggccaatcattactagctgttagttggagacctaatgttttaaacactttctaactgaccataagaattgatacaacgaggaaaatgcgatacacctatgcgacgaaattacggaaacatagtacgataacgaagggcataccgaaagtaaaagaggaAgeIMluIWPREV5 ...pe5,2605,2805,3005,3205,3405,3605,3805,4005,420
    ccttgtataaatcctggttgctgtctctttatgaggagttgtggcccgttgtcaggcaacgtggcgtggtgtgcactgtgtttgctgacgcaacccccactggttggggcattgccaccacctgtcagctcctttccgggactttcgctttccccctccctattgccacggcggaggaacatatttaggaccaacgacagagaaatactcctcaacaccgggcaacagtccgttgcaccgcaccacacgtgacacaaacgactgcgttgggggtgaccaaccccgtaacggtggtggacagtcgaggaaaggccctgaaagcgaaagggggagggataacggtgccgcctWPRE5,4405,4605,4805,5005,5205,5405,5605,5805,600
    actcatcgccgcctgccttgcccgctgctggacaggggctcggctgttgggcactgacaattccgtggtgttgtcggggaagctgacgtcctttccatggctgctcgcctgtgttgccacctggattctgcgcgggacgtccttctgctacgtcccttcggccctcaatccagcgtgagtagcggcggacggaacgggcgacgacctgtccccgagccgacaacccgtgactgttaaggcaccacaacagccccttcgactgcaggaaaggtaccgacgagcggacacaacggtggacctaagacgcgccctgcaggaagacgatgcagggaagccgggagttaggtcgcWPRE5,6205,6405,6605,6805,7005,7205,7405,760
    gaccttccttcccgcggcctgctgccggctctgcggcctcttccgcgtcttcgccttcgccctcagacgagtcggatctccctttgggccgcctccccgcctggcgatggtaccggtgtggaaagtccccaggctccccagcaggcagaagtatgcaaagcatgcatctcaattactggaaggaagggcgccggacgacggccgagacgccggagaaggcgcagaagcggaagcgggagtctgctcagcctagagggaaacccggcggaggggcggaccgctaccatggccacacctttcaggggtccgaggggtcgtccgtcttcatacgtttcgtacgtagagttaatAgeIBaeINaeINsiISacIINgoMIVWPRESV40 promoter5,7805,8005,8205,8405,8605,8805,9005,9205,940
    gtcagcaaccaggtgtggaaagtccccaggctccccagcaggcagaagtatgcaaagcatgcatctcaattagtcagcaaccatagtcccgcccctaactccgcccatcccgcccctaactccgcccagttccgcccattctccgccccatggctgactaattttttttatttatcagtcgttggtccacacctttcaggggtccgaggggtcgtccgtcttcatacgtttcgtacgtagagttaatcagtcgttggtatcagggcggggattgaggcgggtagggcggggattgaggcgggtcaaggcgggtaagaggcggggtaccgactgattaaaaaaaataaataNsiISexAISV40 promoter5,9605,9806,0006,0206,0406,0606,0806,1006,120
    gcagaggccgaggccgcctctgcctctgagctattccagaagtagtgaggaggcttttttggaggcctaggcttttgcaaaaagctcccgggagcttgtatatccattttcggatctgatcagcacgtgttgacaattaatcatcggcatagtatatcggcatagtataatacgacgtctccggctccggcggagacggagactcgataaggtcttcatcactcctccgaaaaaacctccggatccgaaaacgtttttcgagggccctcgaacatataggtaaaagcctagactagtcgtgcacaactgttaattagtagccgtatcatatagccgtatcatattatgctBclIPmlISmaIXmaIAvrIITspMISV40 promoterEM76,1406,1606,1806,2006,2206,2406,2606,2806,300
    caaggtgaggaactaaaccatggccaagcctttgtctcaagaagaatccaccctcattgaaagagcaacggctacaatcaacagcatccccatctctgaagactacagcgtcgccagcgcagctctctctagcgacggccgcatcttcactggtgtcaatgtatatcattttactgttccactccttgatttggtaccggttcggaaacagagttcttcttaggtgggagtaactttctcgttgccgatgttagttgtcgtaggggtagagacttctgatgtcgcagcggtcgcgtcgagagagatcgctgccggcgtagaagtgaccacagttacatatagtaaaatgaBlasticidinEM76,3206,3406,3606,3806,4006,4206,4406,460
    gggggaccttgtgcagaactcgtggtgctgggcactgctgctgctgcggcagctggcaacctgacttgtatcgtcgcgatcggaaatgagaacaggggcatcttgagcccctgcggacggtgccgacaggtgcttctcgatctgcatcctgggatcaaagccatagtgaaggacaccccctggaacacgtcttgagcaccacgacccgtgacgacgacgacgccgtcgaccgttggactgaacatagcagcgctagcctttactcttgtccccgtagaactcggggacgcctgccacggctgtccacgaagagctagacgtaggaccctagtttcggtatcacttcctgtNruIBsaBIPpuMIBlasticidin6,4806,5006,5206,5406,5606,5806,6006,6206,640
    gtgatggacagccgacggcagttgggattcgtgaattgctgccctctggttatgtgtgggagggctaagcacaattcgagctcggtacctttaagaccaatgacttacaaggcagctgtagatcttaaccactttttaaaagaaaaggggggactggaagggctaattcactccccactacctgtcggctgccgtcaaccctaagcacttaacgacgggagaccaatacacaccctcccgattcgtgttaagctcgagccatggaaattctggttactgaatgttccgtcgacatctagaattggtgaaaaattttcttttcccccctgaccttcccgattaagtgagggBlpIBlasticidindelta U3deltaU3/3'LTR6,6606,6806,7006,7206,7406,7606,7806,8006,820
    aacgaagacaagatctgctttttgcttgtactgggtctctctggttagaccagatctgagcctgggagctctctggctaactagggaacccactgcttaagcctcaataaagcttgccttgagtgcttcaagtagtgtgtgcccgtctgttgtgtgactctggtaactagagatcttgcttctgttctagacgaaaaacgaacatgacccagagagaccaatctggtctagactcggaccctcgagagaccgattgatcccttgggtgacgaattcggagttatttcgaacggaactcacgaagttcatcacacacgggcagacaacacactgagaccattgatctctagdeltaU3/3'LTR3' LTRdelta U36,8406,8606,8806,9006,9206,9406,9606,9807,000
    cctcagacccttttagtcagtgtggaaaatctctagcagtagtagttcatgtcatcttattattcagtatttataacttgcaaagaaatgaatatcagagagtgagaggaacttgtttattgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaaggagtctgggaaaatcagtcacaccttttagagatcgtcatcatcaagtacagtagaataataagtcataaatattgaacgtttctttacttatagtctctcactctccttgaacaaataacgtcgaatattaccaatgtttatttcgttatcgtagtgtttaaagtgtttatttSV40 pAdeltaU3/3'LTR3' LTR7,0207,0407,0607,0807,1007,1207,1407,160
    gcatttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtctggctctagctatcccgcccctaactccgcccatcccgcccctaactccgcccagttccgcccattctccgccccatggctgactaattttttttatttatgcagaggccgacgtaaaaaaagtgacgtaagatcaacaccaaacaggtttgagtagttacatagaatagtacagaccgagatcgatagggcggggattgaggcgggtagggcggggattgaggcgggtcaaggcgggtaagaggcggggtaccgactgattaaaaaaaataaatacgtctccggctBsmISV40 pA7,1807,2007,2207,2407,2607,2807,3007,3207,340
    ggccgcctcggcctctgagctattccagaagtagtgaggaggcttttttggaggcctagggacgtacccaattcgccctatagtgagtcgtattacgcgcgctcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacccggcggagccggagactcgataaggtcttcatcactcctccgaaaaaacctccggatccctgcatgggttaagcgggatatcactcagcataatgcgcgcgagtgaccggcagcaaaatgttgcagcactgacccttttgggaccgcaatgggttgaattagcggaacgtcgtgSfiIAvrII7,3607,3807,4007,4207,4407,4607,4807,5007,520
    atccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatgggacgcgccctgtagcggcgcattaagcgcggcgggtgtggtggttacgcgcagcgtgaccgctacacttgccagcgccctagcgcccgctagggggaaagcggtcgaccgcattatcgcttctccgggcgtggctagcgggaagggttgtcaacgcgtcggacttaccgcttaccctgcgcgggacatcgccgcgtaattcgcgccgcccacaccaccaatgcgcgtcgcactggcgatgtgaacggtcgcgggatcgcgggcgFspI7,5407,5607,5807,6007,6207,6407,6607,6807,700
    tcctttcgctttcttcccttcctttctcgccacgttcgccggctttccccgtcaagctctaaatcgggggctccctttagggttccgatttagtgctttacggcacctcgaccccaaaaaacttgattagggtgatggttcacgtagtgggccatcgccctgatagacggtttttaggaaagcgaaagaagggaaggaaagagcggtgcaagcggccgaaaggggcagttcgagatttagcccccgagggaaatcccaaggctaaatcacgaaatgccgtggagctggggttttttgaactaatcccactaccaagtgcatcacccggtagcgggactatctgccaaaaaNaeIDraIIINgoMIV7,7207,7407,7607,7807,8007,8207,8407,860
    cgccctttgacgttggagtccacgttctttaatagtggactcttgttccaaactggaacaacactcaaccctatctcggtctattcttttgatttataagggattttgccgatttcggcctattggttaaaaaatgagctgatttaacaaaaatttaacgcgaattttaacaaaagcgggaaactgcaacctcaggtgcaagaaattatcacctgagaacaaggtttgaccttgttgtgagttgggatagagccagataagaaaactaaatattccctaaaacggctaaagccggataaccaattttttactcgactaaattgtttttaaattgcgcttaaaattgtttt7,8807,9007,9207,9407,9607,9808,0008,0208,040
    tattaacgcttacaatttaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatatgtatccgctcatgagacaataaccctgataaatgcttcaataatattgaaaaaggaagagtatgagtattcaacatttccgtgtcgccataattgcgaatgttaaatccaccgtgaaaagcccctttacacgcgccttggggataaacaaataaaaagatttatgtaagtttatacataggcgagtactctgttattgggactatttacgaagttattataactttttccttctcatactcataagttgtaaaggcacagcggSspISspIbla (amp) promoterAmpicillin8,0608,0808,1008,1208,1408,1608,1808,2008,220
    cttattcccttttttgcggcattttgccttcctgtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgcacgagtgggttacatcgaactggatctcaacagcggtaagatccttgagagttttcgccccgaagaacgttttccaatgatgagaataagggaaaaaacgccgtaaaacggaaggacaaaaacgagtgggtctttgcgaccactttcattttctacgacttctagtcaacccacgtgctcacccaatgtagcttgacctagagttgtcgccattctaggaactctcaaaagcggggcttcttgcaaaaggttactactAclIXmnIAmpicillin8,2408,2608,2808,3008,3208,3408,3608,3808,400
    gcacttttaaagttctgctatgtggcgcggtattatcccgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgacttggttgagtactcaccagtcacagaaaagcatcttacggatggcatgacagtaagagaattatgcagtgctgccataaccgtgaaaatttcaagacgatacaccgcgccataatagggcataactgcggcccgttctcgttgagccagcggcgtatgtgataagagtcttactgaaccaactcatgagtggtcagtgtcttttcgtagaatgcctaccgtactgtcattctcttaatacgtcacgacggtattgBcgIScaIAmpicillin8,4208,4408,4608,4808,5008,5208,5408,560
    catgagtgataacactgcggccaacttacttctgacaacgatcggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtaactcgccttgatcgttgggaaccggagctgaatgaagccataccaaacgacgagcgtgacaccacgatgcctgtagcaatggtactcactattgtgacgccggttgaatgaagactgttgctagcctcctggcttcctcgattggcgaaaaaacgtgttgtaccccctagtacattgagcggaactagcaacccttggcctcgacttacttcggtatggtttgctgctcgcactgtggtgctacggacatcgttacAmpicillin8,5808,6008,6208,6408,6608,6808,7008,7208,740
    gcaacaacgttgcgcaaactattaactggcgaactacttactctagcttcccggcaacaattaatagactggatggaggcggataaagttgcaggaccacttctgcgctcggcccttccggctggctggtttattgctgataaatctggagccggtgagcgtgggtctcgcggtacgttgttgcaacgcgtttgataattgaccgcttgatgaatgagatcgaagggccgttgttaattatctgacctacctccgcctatttcaacgtcctggtgaagacgcgagccgggaaggccgaccgaccaaataacgactatttagacctcggccactcgcacccagagcgccatAclIFspIAmpicillin8,7608,7808,8008,8208,8408,8608,8808,9008,920
    tcattgcagcactggggccagatggtaagccctcccgtatcgtagttatctacacgacggggagtcaggcaactatggatgaacgaaatagacagatcgctgagataggtgcctcactgattaagcattggtaactgtcagaccaagtttactcatatatactttagattgatttagtaacgtcgtgaccccggtctaccattcgggagggcatagcatcaatagatgtgctgcccctcagtccgttgatacctacttgctttatctgtctagcgactctatccacggagtgactaattcgtaaccattgacagtctggttcaaatgagtatatatgaaatctaactaaaAmpicillin8,9408,9608,9809,0009,0209,0409,0609,0809,100
    aaaacttcatttttaatttaaaaggatctaggtgaagatcctttttgataatctcatgaccaaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaagatcaaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaattttgaagtaaaaattaaattttcctagatccacttctaggaaaaactattagagtactggttttagggaattgcactcaaaagcaaggtgactcgcagtctggggcatcttttctagtttcctagaagaactctaggaaaaaaagacgcgcattagacgacgaacgtttgttttpUC ori9,1209,1409,1609,1809,2009,2209,2409,260
    aaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagataccaaatactgttcttctagtgtagccgtagttaggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatttggtggcgatggtcgccaccaaacaaacggcctagttctcgatggttgagaaaaaggcttccattgaccgaagtcgtctcgcgtctatggtttatgacaagaagatcacatcggcatcaatccggtggtgaagttcttgagacatcgtggcggatgtatggagcgagacgattpUC ori9,2809,3009,3209,3409,3609,3809,4009,4209,440
    tcctgttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagcccagcttggagcgaacgacctacaccgaactgagatacctacagcgtgagctatgaggacaatggtcaccgacgacggtcaccgctattcagcacagaatggcccaacctgagttctgctatcaatggcctattccgcgtcgccagcccgacttgccccccaagcacgtgtgtcgggtcgaacctcgcttgctggatgtggcttgactctatggatgtcgcactcgatacpUC ori9,4609,4809,5009,5209,5409,5609,5809,6009,620
    agaaagcgccacgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggagagcgcacgagggagcttccagggggaaacgcctggtatctttatagtcctgtcgggtttcgccacctctgacttgagcgtcgatttttgtgatgctcgtcagggtctttcgcggtgcgaagggcttccctctttccgcctgtccataggccattcgccgtcccagccttgtcctctcgcgtgctccctcgaaggtccccctttgcggaccatagaaatatcaggacagcccaaagcggtggagactgaactcgcagctaaaaacactacgagcagtcccpUC ori9,6409,6609,6809,7009,7209,7409,7609,7809,800
    gggcggagcctatggaaaaacgccagcaacgcggcctttttacggttcctggccttttgctggccttttgctcacatgttctttcctgcgttatcccctgattctgtggataaccgtattaccgcctttgagtgagctgataccgctcgccgcagccgaacgaccgagcgcagcgcccgcctcggatacctttttgcggtcgttgcgccggaaaaatgccaaggaccggaaaacgaccggaaaacgagtgtacaagaaaggacgcaataggggactaagacacctattggcataatggcggaaactcactcgactatggcgagcggcgtcggcttgctggctcgcgtcgcPciIpUC ori9,8209,8409,8609,8809,9009,9209,9409,960
    agtcagtgagcgaggaagcggaagagcgcccaatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctggcacgacaggtttcccgactggaaagcgggcagtgagcgcaacgcaattaatgtgagttagctcactcattaggcaccccaggctttacactttcagtcactcgctccttcgccttctcgcgggttatgcgtttggcggagaggggcgcgcaaccggctaagtaattacgtcgaccgtgctgtccaaagggctgacctttcgcccgtcactcgcgttgcgttaattacactcaatcgagtgagtaatccgtggggtccgaaatgtgaa9,98010,00010,02010,04010,06010,08010,10010,12010,140
    tatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgaccatgattacgccaagcgcgcaattaaccctcactaaagggaacaaaagctggagctgcaagcttatacgaaggccgagcatacaacacaccttaacactcgcctattgttaaagtgtgtcctttgtcgatactggtactaatgcggttcgcgcgttaattgggagtgatttcccttgttttcgacctcgacgttcgaa10,16010,18010,20010,22010,24010,26010,280
    • Plasmid
    • Relevant Items
    • Metadata
    • Description
    • Linear Map
    Editing disabled on read-only sequence.
    10284 bp75008000850090009500100005001000150020002500hM3DHIV-1 5' LTR2563-4334RSV promoter,pRSV/5'LTR,HIV-1 psi packaging signal,BaeINruI,XmnI,NotIRRE,MfeI,BbvCI,Bpu10IBsmIBsaBIcPPT,KflI,PpuMI,HpaIBspDI,ClaINdeIPcmv,SnaBIBsmBIEsp3I,SpeI,SalINgoMIV,NaeI,DraIIISspIbla (amp) promoter,SspIAclI,XmnIBcgI,ScaIAmpicillinAclIFspIpUC oriPciI

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    10284