Welcome to Benchling!

You're looking at a DNA Sequence. Here are some things you can do with it:

Create an alignment

  1. Create alignments with both DNA and AA sequences.
  2. Bulk-align multiple sequences at once.
  3. Powerful visualization tool to inspect alignments in detail.

Design a primer

Create a translation

Design a CRISPR guide

Assemble and transform a sequence

Benchling is actively tested against the latest versions of Chrome, Firefox, Safari, and Edge. **It doesn't look like your current browser is supported** - for more information, [click here](/browsers).
Monospace normal
Monospace bold
working...
Advanced Settings
pAAV_hSyn HA-hM3D(Gq)-mCitrine-1BCT (JGE208)
  • Sequence Map
Editing disabled on read-only sequence.
cctgcaggcagctgcgcgctcgctcgctcactgaggccgcccgggcaaagcccgggcgtcgggcgacctttggtcgcccggcctcagtgagcgagcgagcgcgcagagagggagtggccaactccatcactaggggttcctgcggccgcacgcgtgtgtctagactgcagagggcggacgtccgtcgacgcgcgagcgagcgagtgactccggcgggcccgtttcgggcccgcagcccgctggaaaccagcgggccggagtcactcgctcgctcgcgcgtctctccctcaccggttgaggtagtgatccccaaggacgccggcgtgcgcacacagatctgacgtctcccgEagIMluINotIXbaIAflIIIPspOMIL-ITRHuman S...omoter20406080100120140160
cctgcgtatgagtgcaagtgggttttaggaccaggatgaggcggggtgggggtgcctacctgacgaccgaccccgacccactggacaagcacccaacccccattccccaaattgcgcatcccctatcagagagggggaggggaaacaggatgcggcgaggcgcgtgcgcactgccggacgcatactcacgttcacccaaaatcctggtcctactccgccccacccccacggatggactgctggctggggctgggtgacctgttcgtgggttgggggtaaggggtttaacgcgtaggggatagtctctccccctcccctttgtcctacgccgctccgcgcacgcgtgacggApaIFspAIHuman Synapsin promoter180200220240260280300320340
agcttcagcaccgcggacagtgccttcgcccccgcctggcggcgcgcgccaccgccgcctcagcactgaaggcgcgctgacgtcactcgccggtcccccgcaaactccccttcccggccaccttggtcgcgtccgcgccgccgccggcccagccggaccgcaccacgcgaggcgctcgaagtcgtggcgcctgtcacggaagcgggggcggaccgccgcgcgcggtggcggcggagtcgtgacttccgcgcgactgcagtgagcggccagggggcgtttgaggggaagggccggtggaaccagcgcaggcgcggcggcggccgggtcggcctggcgtggtgcgctccgcgBbvCIRsrIISacIIHuman Synapsin promoter360380400420440460480500520
gagataggggggcacgggcgcgaccatctgcgctgcggcgccggcgactcagcgctgcctcagtctgcggtgggcagcggaggagtcgtgtcgtgcctgagagcgcagtcgagaaggtaccggatccgccaccatgtacccatacgatgttccagattacgctaccttgcacaatctctatccccccgtgcccgcgctggtagacgcgacgccgcggccgctgagtcgcgacggagtcagacgccacccgtcgcctcctcagcacagcacggactctcgcgtcagctcttccatggcctaggcggtggtacatgggtatgctacaaggtctaatgcgatggaacgtgttaAfeIKasIKpnIMreINarISfoIBamHIPluTISgrAIAcc65IMY2PY4DV6PD8YA10TL12HN14659-3232Human Synapsin promoterhM3D(Gq)540560580600620640660680700
aacagtacaacctcgcctttgtttccaaacatcagctcctcctggatacacagcccctccgatgcagggctgcccccgggaaccgtcactcatttcggcagctacaatgtttctcgagcagctggcaatttctcctctccagacggtaccaccgatgaccctctgggaggtcatattgtcatgttggagcggaaacaaaggtttgtagtcgaggaggacctatgtgtcggggaggctacgtcccgacgggggcccttggcagtgagtaaagccgtcgatgttacaaagagctcgtcgaccgttaaagaggagaggtctgccatggtggctactgggagaccctccagtatKpnITliIXhoIEcoNIAcc65IPaeR7INS16TT18SP20LF22PN24IS26SS28WI30HS32PS34DA36GL38PP40GT42VT44HF46GS48YN50VS52RA54AG56NF58SS60PD62GT64TD66DP68LG70GH72659-3232hM3D(Gq)720740760780800820840860
ccgtctggcaagtggtcttcatcgctttcttaacgggcatcctggccttggtgaccatcatcggcaacatcctggtaattgtgtcatttaaggtcaacaagcagctgaagacggtcaacaactacttcctcttaagcctggcctgtgccgatctgattatcggggtcatttcaatggcagaccgttcaccagaagtagcgaaagaattgcccgtaggaccggaaccactggtagtagccgttgtaggaccattaacacagtaaattccagttgttcgtcgacttctgccagttgttgatgaaggagaattcggaccggacacggctagactaatagccccagtaaagttaAflIIBstEIITV74WQ76VV78FI80AF82LT84GI86LA88LV90TI92IG94NI96LV98IV100SF102KV104NK106QL108KT110VN112NY114FL116LS118LA120CA122DL124II126GV128IS130M659-3232hM3D(Gq)8809009209409609801,0001,0201,040
gaatctgtttacgacctacatcatcatgaatcgatgggccttagggaacttggcctgtgacctctggcttgccattgactgcgtagccagcaatgcctctgttatgaatcttctggtcatcagctttgacagatacttttccatcacgaggccgctcacgtaccgagccaaacgacttagacaaatgctggatgtagtagtacttagctacccggaatcccttgaaccggacactggagaccgaacggtaactgacgcatcggtcgttacggagacaatacttagaagaccagtagtcgaaactgtctatgaaaaggtagtgctccggcgagtgcatggctcggtttgctBsu36IN132LF134TT136YI138IM140NR142WA144LG146NL148AC150DL152WL154AI156DC158VA160SN162AS164VM166NL168LV170IS172FD174RY176FS178IT180RP182LT184YR186AK188R659-3232hM3D(Gq)1,0601,0801,1001,1201,1401,1601,1801,2001,220
acaacaaagagagccggtgtgatgatcggtctggcttgggtcatctcctttgtcctttgggctcctgccatcttgttctggcaatactttgttggaaagagaactgtgcctccgggagagtgcttcattcagttcctcagtgagcccaccattacttttggcacagccatcgctgtgttgtttctctcggccacactactagccagaccgaacccagtagaggaaacaggaaacccgaggacggtagaacaagaccgttatgaaacaacctttctcttgacacggaggccctctcacgaagtaagtcaaggagtcactcgggtggtaatgaaaaccgtgtcggtagcgacT190TK192RA194GV196MI198GL200AW202VI204SF206VL208WA210PA212IL214FW216QY218FV220GK222RT224VP226PG228EC230FI232QF234LS236EP238TI240TF242GT244AI246A659-3232hM3D(Gq)1,2401,2601,2801,3001,3201,3401,3601,3801,400
gtttttatatgcctgtcaccattatgactattttatactggaggatctataaggaaactgaaaagcgtaccaaagagcttgctggcctgcaagcctctgggacagaggcagagacagaaaactttgtccaccccacgggcagttctcgaagctgcagcagttacgaacttcaacacaaaaatatacggacagtggtaatactgataaaatatgacctcctagatattcctttgacttttcgcatggtttctcgaacgaccggacgttcggagaccctgtctccgtctctgtcttttgaaacaggtggggtgcccgtcaagagcttcgacgtcgtcaatgcttgaagttgtG248FY250MP252VT254IM256TI258LY260WR262IY264KE266TE268KR270TK272EL274AG276LQ278AS280GT282EA284ET286EN288FV290HP292TG294SS296RS298CS300SY302EL304QQ306659-3232hM3D(Gq)1,4201,4401,4601,4801,5001,5201,5401,560
gcaaagcatgaaacgctccaacaggaggaagtatggccgctgccacttctggttcacaaccaagagctggaaacccagctccgagcagatggaccaagaccacagcagcagtgacagttggaacaacaatgatgctgctgcctccctggagaactccgcctcctccgacgaggagcgtttcgtactttgcgaggttgtcctccttcataccggcgacggtgaagaccaagtgttggttctcgacctttgggtcgaggctcgtctacctggttctggtgtcgtcgtcactgtcaaccttgttgttactacgacgacggagggacctcttgaggcggaggaggctgctcctcPflMIQS308MK310RS312NR314RK316YG318RC320HF322WF324TT326KS328WK330PS332SE334QM336DQ338DH340SS342SD344SW346NN348ND350AA352AS354LE356NS358AS360SD362EE364659-3232hM3D(Gq)1,5801,6001,6201,6401,6601,6801,7001,7201,740
gacattggctccgagacgagagccatctactccatcgtgctcaagcttccgggtcacagcaccatcctcaactccaccaagttaccctcatcggacaacctgcaggtgcctgaggaggagctggggatggtggacttggagaggaaagccgacaagctgcaggcccagaagagcgctgtaaccgaggctctgctctcggtagatgaggtagcacgagttcgaaggcccagtgtcgtggtaggagttgaggtggttcaatgggagtagcctgttggacgtccacggactcctcctcgacccctaccacctgaacctctcctttcggctgttcgacgtccgggtcttctcgcSapIBspQIPaqCIBsu36IDI366GS368ET370RA372IY374SI376VL378KL380PG382HS384TI386LN388ST390KL392PS394SD396NL398QV400PE402EE404LG406MV408DL410ER412KA414DK416LQ418AQ420KS422659-3232hM3D(Gq)1,7601,7801,8001,8201,8401,8601,8801,9001,920
tggacgatggaggcagttttccaaaaagcttctccaagcttcccatccagctagagtcagccgtggacacagctaagacttctgacgtcaactcctcagtgggtaagagcacggccactctacctctgtccttcaaggaagccactctggccaagaggtttgctctgaagaccagacctgctacctccgtcaaaaggtttttcgaagaggttcgaagggtaggtcgatctcagtcggcacctgtgtcgattctgaagactgcagttgaggagtcacccattctcgtgccggtgagatggagacaggaagttccttcggtgagaccggttctccaaacgagacttctggtcVD424DG426GS428FP430KS432FS434KL436PI438QL440ES442AV444DT446AK448TS450DV452NS454SV456GK458ST460AT462LP464LS466FK468EA470TL472AK474RF476AL478KT480R659-3232hM3D(Gq)1,9401,9601,9802,0002,0202,0402,0602,0802,100
aagtcagatcactaagcggaaaaggatgtccctggtcaaggagaagaaagcggcccagaccctcagtgcgatcttgcttgccttcatcatcacttggaccccatacaacatcatggttctggtgaacaccttttgtgacagctgcatacccaaaaccttttggaatctgggctacttcagtctagtgattcgccttttcctacagggaccagttcctcttctttcgccgggtctgggagtcacgctagaacgaacggaagtagtagtgaacctggggtatgttgtagtaccaagaccacttgtggaaaacactgtcgacgtatgggttttggaaaaccttagacccgatgEcoNIS482QI484TK486RK488RM490SL492VK494EK496KA498AQ500TL502SA504IL506LA508FI510IT512WT514PY516NI518MV520LV522NT524FC526DS528CI530PK532TF534WN536LG538Y659-3232hM3D(Gq)2,1202,1402,1602,1802,2002,2202,2402,260
tggctgtgctacatcaacagcaccgtgaaccccgtgtgctatgctctgtgcaacaaaacattcagaaccactttcaagatgctgctgctgtgccagtgtgacaaaaaaaagaggcgcaagcagcagtaccagcagagacagtcggtcatttttcacaagcgcgcacccgagcaggaccgacacgatgtagttgtcgtggcacttggggcacacgatacgagacacgttgttttgtaagtcttggtgaaagttctacgacgacgacacggtcacactgttttttttctccgcgttcgtcgtcatggtcgtctctgtcagccagtaaaaagtgttcgcgcgtgggctcgtccW540LC542YI544NS546TV548NP550VC552YA554LC556NK558TF560RT562TF564KM566LL568LC570QC572DK574KK576RR578KQ580QY582QQ584RQ586SV588IF590HK592RA594PE596Q659-3232hM3D(Gq)2,2802,3002,3202,3402,3602,3802,4002,4202,440
ccttggtcgacatggtgagcaagggcgaggagctgttcaccggggtggtgcccatcctggtcgagctggacggcgacgtaaacggccacaagttcagcgtgtccggcgagggcgagggcgatgccacctacggcaagctgaccctgaagttcatctgcaccaccggcaagctgccggaaccagctgtaccactcgttcccgctcctcgacaagtggccccaccacgggtaggaccagctcgacctgccgctgcatttgccggtgttcaagtcgcacaggccgctcccgctcccgctacggtggatgccgttcgactgggacttcaagtagacgtggtggccgttcgacggAccISalIStuIA598LV600DM602VS604KG606EE608LF610TG612VV614PI616LV618EL620DG622DV624NG626HK628FS630VS632GE634GE636GD638AT640YG642KL644TL646KF648IC650TT652GK654LP656659-3232mCitrine2,4602,4802,5002,5202,5402,5602,5802,6002,620
cgtgccctggcccaccctcgtgaccaccttcggctacggcctgatgtgcttcgcccgctaccccgaccacatgaagcagcacgacttcttcaagtccgccatgcccgaaggctacgtccaggagcgcaccatcttcttcaaggacgacggcaactacaagacccgcgccgaggtggcacgggaccgggtgggagcactggtggaagccgatgccggactacacgaagcgggcgatggggctggtgtacttcgtcgtgctgaagaagttcaggcggtacgggcttccgatgcaggtcctcgcgtggtagaagaagttcctgctgccgttgatgttctgggcgcggctccacVP658WP660TL662VT664TF666GY668GL670MC672FA674RY676PD678HM680KQ682HD684FF686KS688AM690PE692GY694VQ696ER698TI700FF702KD704DG706NY708KT710RA712EV714659-3232mCitrine2,6402,6602,6802,7002,7202,7402,7602,7802,800
aagttcgagggcgacaccctggtgaaccgcatcgagctgaagggcatcgacttcaaggaggacggcaacatcctggggcacaagctggagtacaactacaacagccacaacgtctatatcatggccgacaagcagaagaacggcatcaaggtgaacttcaagatccgccacaacattcaagctcccgctgtgggaccacttggcgtagctcgacttcccgtagctgaagttcctcctgccgttgtaggaccccgtgttcgacctcatgttgatgttgtcggtgttgcagatatagtaccggctgttcgtcttcttgccgtagttccacttgaagttctaggcggtgttgtKF716EG718DT720LV722NR724IE726LK728GI730DF732KE734DG736NI738LG740HK742LE744YN746YN748SH750NV752YI754MA756DK758QK760NG762IK764VN766FK768IR770HN772659-3232mCitrine2,8202,8402,8602,8802,9002,9202,9402,960
tcgaggacggcagcgtgcagctcgccgaccactaccagcagaacacccccatcggcgacggccccgtgctgctgcccgacaaccactacctgagctaccagtccaaactgagcaaagaccccaacgagaagcgcgatcacatggtcctgctggagttcgtgaccgccgccgggatagctcctgccgtcgcacgtcgagcggctggtgatggtcgtcttgtgggggtagccgctgccggggcacgacgacgggctgttggtgatggactcgatggtcaggtttgactcgtttctggggttgctcttcgcgctagtgtaccaggacgacctcaagcactggcggcggccctaIE774DG776SV778QL780AD782HY784QQ786NT788PI790GD792GP794VL796LP798DN800HY802LS804YQ806SK808LS810KD812PN814EK816RD818HM820VL822LE824FV826TA828AG830I659-3232mCitrine2,9803,0003,0203,0403,0603,0803,1003,1203,140
cactctcggcatggacgagctgtacaaggggcgcgccaaacaagcgttccacaaactgatacgctttaagtgcgcaggttgagaattcgatatcaagcttatcgataatcaacctctggattacaaaatttgtgaaagattgactggtattcttaactatgttgctccttttacggtgagagccgtacctgctcgacatgttccccgcgcggtttgttcgcaaggtgtttgactatgcgaaattcacgcgtccaactcttaagctatagttcgaatagctattagttggagacctaatgttttaaacactttctaactgaccataagaattgatacaacgaggaaaatgcAjuIAscIBsrGIEcoRIEcoRVT832LG834MD836EL838YK840GR842AK844QA846FH848KL850IR852FK854CA856G*858659-3232WPRE1BCTmCitrine3,1603,1803,2003,2203,2403,2603,2803,3003,320
ctatgtggatacgctgctttaatgcctttgtatcatgctattgcttcccgtatggctttcattttctcctccttgtataaatcctggttgctgtctctttatgaggagttgtggcccgttgtcaggcaacgtggcgtggtgtgcactgtgtttgctgacgcaacccccactggttgatacacctatgcgacgaaattacggaaacatagtacgataacgaagggcataccgaaagtaaaagaggaggaacatatttaggaccaacgacagagaaatactcctcaacaccgggcaacagtccgttgcaccgcaccacacgtgacacaaacgactgcgttgggggtgaccaaPflMIWPRE3,3403,3603,3803,4003,4203,4403,4603,4803,500
ggggcattgccaccacctgtcagctcctttccgggactttcgctttccccctccctattgccacggcggaactcatcgccgcctgccttgcccgctgctggacaggggctcggctgttgggcactgacaattccgtggtgttgtcggggaaatcatcgtcctttccttggctgctccccgtaacggtggtggacagtcgaggaaaggccctgaaagcgaaagggggagggataacggtgccgccttgagtagcggcggacggaacgggcgacgacctgtccccgagccgacaacccgtgactgttaaggcaccacaacagcccctttagtagcaggaaaggaaccgacgaWPRE3,5203,5403,5603,5803,6003,6203,6403,660
cgcctatgttgccacctggattctgcgcgggacgtccttctgctacgtcccttcggccctcaatccagcggaccttccttcccgcggcctgctgccggctctgcggcctcttccgcgtcttcgccttcgccctcagacgagtcggatctccctttgggccgcctccccgcatcgagcggatacaacggtggacctaagacgcgccctgcaggaagacgatgcagggaagccgggagttaggtcgcctggaaggaagggcgccggacgacggccgagacgccggagaaggcgcagaagcggaagcgggagtctgctcagcctagagggaaacccggcggaggggcgtagctSacIIWPRE3,6803,7003,7203,7403,7603,7803,8003,8203,840
taccgagcgctgctcgagagatctacgggtggcatccctgtgacccctccccagtgcctctcctggccctggaagttgccactccagtgcccaccagccttgtcctaataaaattaagttgcatcattttgtctgactaggtgtccttctataatattatggggtggaggggggtatggctcgcgacgagctctctagatgcccaccgtagggacactggggaggggtcacggagaggaccgggaccttcaacggtgaggtcacgggtggtcggaacaggattattttaattcaacgtagtaaaacagactgatccacaggaagatattataataccccacctccccccaAfeIBmrITliIXhoIBglIICspCIPaeR7IhGH polyA3,8603,8803,9003,9203,9403,9603,9804,0004,020
ggtatggagcaaggggcaagttgggaagacaacctgtagggcctgcggggtctattgggaaccaagctggagtgcagtggcacaatcttggctcactgcaatctccgcctcctgggttcaagcgattctcctgcctcagcctcccgagttgttgggattccaggcatgcatgaccccatacctcgttccccgttcaacccttctgttggacatcccggacgccccagataacccttggttcgacctcacgtcaccgtgttagaaccgagtgacgttagaggcggaggacccaagttcgctaagaggacggagtcggagggctcaacaaccctaaggtccgtacgtactggNsiISphIBbvCIhGH polyA4,0404,0604,0804,1004,1204,1404,1604,1804,200
aggctcagctaatttttgtttttttggtagagacggggtttcaccatattggccaggctggtctccaactcctaatctcaggtgatctacccaccttggcctcccaaattgctgggattacaggcgtgaaccactgctcccttccctgtccttctgattttgtaggtaaccacgttccgagtcgattaaaaacaaaaaaaccatctctgccccaaagtggtataaccggtccgaccagaggttgaggattagagtccactagatgggtggaaccggagggtttaacgaccctaatgtccgcacttggtgacgagggaagggacaggaagactaaaacatccattggtgcaBlpIBsaIPmlIBstXIBstEIIhGH polyA4,2204,2404,2604,2804,3004,3204,3404,360
gcggaccgagcggccgcaggaacccctagtgatggagttggccactccctctctgcgcgctcgctcgctcactgaggccgggcgaccaaaggtcgcccgacgcccgggctttgcccgggcggcctcagtgagcgagcgagcgcgcagctgcctgcaggggcgcctgatgcggtatcgcctggctcgccggcgtccttggggatcactacctcaaccggtgagggagagacgcgcgagcgagcgagtgactccggcccgctggtttccagcgggctgcgggcccgaaacgggcccgccggagtcactcgctcgctcgcgcgtcgacggacgtccccgcggactacgccataEagIKasINarINotISfoIPluTIRsrIIR-ITR4,3804,4004,4204,4404,4604,4804,5004,5204,540
tttctccttacgcatctgtgcggtatttcacaccgcatacgtcaaagcaaccatagtacgcgccctgtagcggcgcattaagcgcggcgggtgtggtggttacgcgcagcgtgaccgctacacttgccagcgccctagcgcccgctcctttcgctttcttcccttcctttctcgcaaagaggaatgcgtagacacgccataaagtgtggcgtatgcagtttcgttggtatcatgcgcgggacatcgccgcgtaattcgcgccgcccacaccaccaatgcgcgtcgcactggcgatgtgaacggtcgcgggatcgcgggcgaggaaagcgaaagaagggaaggaaagagcgf1 Origin4,5604,5804,6004,6204,6404,6604,6804,7004,720
cacgttcgccggctttccccgtcaagctctaaatcgggggctccctttagggttccgatttagtgctttacggcacctcgaccccaaaaaacttgatttgggtgatggttcacgtagtgggccatcgccctgatagacggtttttcgccctttgacgttggagtccacgttctttgtgcaagcggccgaaaggggcagttcgagatttagcccccgagggaaatcccaaggctaaatcacgaaatgccgtggagctggggttttttgaactaaacccactaccaagtgcatcacccggtagcgggactatctgccaaaaagcgggaaactgcaacctcaggtgcaagaaaDraIIIf1 Origin4,7404,7604,7804,8004,8204,8404,8604,8804,900
aatagtggactcttgttccaaactggaacaacactcaaccctatctcgggctattcttttgatttataagggattttgccgatttcggcctattggttaaaaaatgagctgatttaacaaaaatttaacgcgaattttaacaaaatattaacgtttacaattttatggtgcactcttatcacctgagaacaaggtttgaccttgttgtgagttgggatagagcccgataagaaaactaaatattccctaaaacggctaaagccggataaccaattttttactcgactaaattgtttttaaattgcgcttaaaattgttttataattgcaaatgttaaaataccacgtgagPsiIf1 Origin4,9204,9404,9604,9805,0005,0205,0405,060
tcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcgcgagagtcatgttagacgagactacggcgtatcaattcggtcggggctgtgggcggttgtgggcgactgcgcgggactgcccgaacagacgagggccgtaggcgaatgtctgttcgacactggcagaggccctcgacgtacacagtctccaaaagtggcagtagtggctttgcgcgctc5,0805,1005,1205,1405,1605,1805,2005,2205,240
acgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatggtttcttagacgtcaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatatgtatccgctcatgagacaataaccctgataaatgctttgctttcccggagcactatgcggataaaaatatccaattacagtactattattaccaaagaatctgcagtccaccgtgaaaagcccctttacacgcgccttggggataaacaaataaaaagatttatgtaagtttatacataggcgagtactctgttattgggactatttacgaa5,2605,2805,3005,3205,3405,3605,3805,4005,420
caataatattgaaaaaggaagagtatgagtattcaacatttccgtgtcgcccttattcccttttttgcggcattttgccttcctgtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgcacgagtgggttacatcgaactggatctcaacagttattataactttttccttctcatactcataagttgtaaaggcacagcgggaataagggaaaaaacgccgtaaaacggaaggacaaaaacgagtgggtctttgcgaccactttcattttctacgacttctagtcaacccacgtgctcacccaatgtagcttgacctagagttgtAmpR5,4405,4605,4805,5005,5205,5405,5605,5805,600
gcggtaagatccttgagagttttcgccccgaagaacgttttccaatgatgagcacttttaaagttctgctatgtggcgcggtattatcccgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgacttggttgagtactcaccagtcacagaaaacgccattctaggaactctcaaaagcggggcttcttgcaaaaggttactactcgtgaaaatttcaagacgatacaccgcgccataatagggcataactgcggcccgttctcgttgagccagcggcgtatgtgataagagtcttactgaaccaactcatgagtggtcagtgtcttttScaIXmnIAmpR5,6205,6405,6605,6805,7005,7205,7405,760
gcatcttacggatggcatgacagtaagagaattatgcagtgctgccataaccatgagtgataacactgcggccaacttacttctgacaacgatcggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtaactcgccttgatcgttgggaaccggagctgcgtagaatgcctaccgtactgtcattctcttaatacgtcacgacggtattggtactcactattgtgacgccggttgaatgaagactgttgctagcctcctggcttcctcgattggcgaaaaaacgtgttgtaccccctagtacattgagcggaactagcaacccttggcctcgacPvuIAmpR5,7805,8005,8205,8405,8605,8805,9005,9205,940
aatgaagccataccaaacgacgagcgtgacaccacgatgcctgtagcaatggcaacaacgttgcgcaaactattaactggcgaactacttactctagcttcccggcaacaattaatagactggatggaggcggataaagttgcaggaccacttctgcgctcggcccttccggctgttacttcggtatggtttgctgctcgcactgtggtgctacggacatcgttaccgttgttgcaacgcgtttgataattgaccgcttgatgaatgagatcgaagggccgttgttaattatctgacctacctccgcctatttcaacgtcctggtgaagacgcgagccgggaaggccgacAseIAmpR5,9605,9806,0006,0206,0406,0606,0806,1006,120
gctggtttattgctgataaatctggagccggtgagcgtgggtctcgcggtatcattgcagcactggggccagatggtaagccctcccgtatcgtagttatctacacgacggggagtcaggcaactatggatgaacgaaatagacagatcgctgagataggtgcctcactgattaacgaccaaataacgactatttagacctcggccactcgcacccagagcgccatagtaacgtcgtgaccccggtctaccattcgggagggcatagcatcaatagatgtgctgcccctcagtccgttgatacctacttgctttatctgtctagcgactctatccacggagtgactaattBmrIBsaIAmpR6,1406,1606,1806,2006,2206,2406,2606,2806,300
gcattggtaactgtcagaccaagtttactcatatatactttagattgatttaaaacttcatttttaatttaaaaggatctaggtgaagatcctttttgataatctcatgaccaaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaagatcaaaggacgtaaccattgacagtctggttcaaatgagtatatatgaaatctaactaaattttgaagtaaaaattaaattttcctagatccacttctaggaaaaactattagagtactggttttagggaattgcactcaaaagcaaggtgactcgcagtctggggcatcttttctagtttcctpUC ori6,3206,3406,3606,3806,4006,4206,4406,460
tcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaaaaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgtagttagagaagaactctaggaaaaaaagacgcgcattagacgacgaacgtttgtttttttggtggcgatggtcgccaccaaacaaacggcctagttctcgatggttgagaaaaaggcttccattgaccgaagtcgtctcgcgtctatggtttatgacaggaagatcacatcggcatcaatcpUC ori6,4806,5006,5206,5406,5606,5806,6006,6206,640
gccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctgttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagcccagcggtggtgaagttcttgagacatcgtggcggatgtatggagcgagacgattaggacaatggtcaccgacgacggtcaccgctattcagcacagaatggcccaacctgagttctgctatcaatggcctattccgcgtcgccagcccgacttgccccccaagcacgtgtgtcgggtcAlwNIpUC ori6,6606,6806,7006,7206,7406,7606,7806,8006,820
cttggagcgaacgacctacaccgaactgagatacctacagcgtgagctatgagaaagcgccacgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggagagcgcacgagggagcttccagggggaaacgcctggtatctttatagtcctgtcgaacctcgcttgctggatgtggcttgactctatggatgtcgcactcgatactctttcgcggtgcgaagggcttccctctttccgcctgtccataggccattcgccgtcccagccttgtcctctcgcgtgctccctcgaaggtccccctttgcggaccatagaaatatcaggacagpUC ori6,8406,8606,8806,9006,9206,9406,9606,9807,000
gggtttcgccacctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctatggaaaaacgccagcaacgcggcctttttacggttcctggccttttgctggccttttgctcacatgtcccaaagcggtggagactgaactcgcagctaaaaacactacgagcagtccccccgcctcggatacctttttgcggtcgttgcgccggaaaaatgccaaggaccggaaaacgaccggaaaacgagtgtacaPciIAflIIIpUC ori7,0207,0407,0607,0807,1007,120
  • Plasmid
Editing disabled on read-only sequence.
7130 bp500055006000650050010001500hM3D(Gq)659-3232

Welcome to Benchling!

Sign in to view data.

New digest

Saved digests

Enzyme AatII
Enzyme lists
Cut sites visible on maps
Find enzyme
Name Cuts
Selected Color
Show enzymes that cut

Primers

History

Lineage

 Show Full History
Change User Timestamp

Sequence Alignments

Saved Alignments

Sequence Info

Tags

Name
Parent Version
Folder
Topology
Start Index
Locked
Created
--
Length
--
Export Data
Split Workspace
Bases
7130