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pLenti6.3/V5-DIO-HA-hM3D(Gq)-mCherry
  • Sequence Map
    Editing disabled on read-only sequence.
    aatgtagtcttatgcaatactcttgtagtcttgcaacatggtaacgatgagttagcaacatgccttacaaggagagaaaaagcaccgtgcatgccgattggtggaagtaaggtggtacgatcgtgccttattaggaaggcaacagacgggtctgacatggattggacgaaccactttacatcagaatacgttatgagaacatcagaacgttgtaccattgctactcaatcgttgtacggaatgttcctctctttttcgtggcacgtacggctaaccaccttcattccaccatgctagcacggaataatccttccgttgtctgcccagactgtacctaacctgcttggtgaBaeIRSV promoterpRSV/5'LTR20406080100120140160
    gaattgccgcattgcagagatattgtatttaagtgcctagctcgatacataaacgggtctctctggttagaccagatctgagcctgggagctctctggctaactagggaacccactgcttaagcctcaataaagcttgccttgagtgcttcaagtagtgtgtgcccgtctgttgtcttaacggcgtaacgtctctataacataaattcacggatcgagctatgtatttgcccagagagaccaatctggtctagactcggaccctcgagagaccgattgatcccttgggtgacgaattcggagttatttcgaacggaactcacgaagttcatcacacacgggcagacaacapRSV/5'LTRHIV-1 5' LTRRSV promoter180200220240260280300320340
    gtgactctggtaactagagatccctcagacccttttagtcagtgtggaaaatctctagcagtggcgcccgaacagggacttgaaagcgaaagggaaaccagaggagctctctcgacgcaggactcggcttgctgaagcgcgcacggcaagaggcgaggggcggcgactggtgagtcactgagaccattgatctctagggagtctgggaaaatcagtcacaccttttagagatcgtcaccgcgggcttgtccctgaactttcgctttccctttggtctcctcgagagagctgcgtcctgagccgaacgacttcgcgcgtgccgttctccgctccccgccgctgaccactcapRSV/5'LTRHIV-1 5' LTR360380400420440460480500520
    acgccaaaaattttgactagcggaggctagaaggagagagatgggtgcgagagcgtcagtattaagcgggggagaattagatcgcgatgggaaaaaattcggttaaggccagggggaaagaaaaaatataaattaaaacatatagtatgggcaagcagggagctagaacgattcgtgcggtttttaaaactgatcgcctccgatcttcctctctctacccacgctctcgcagtcataattcgccccctcttaatctagcgctacccttttttaagccaattccggtccccctttcttttttatatttaattttgtatatcatacccgttcgtccctcgatcttgctaagcNruIHIV-1 psi packaging signal540560580600620640660680700
    cagttaatcctggcctgttagaaacatcagaaggctgtagacaaatactgggacagctacaaccatcccttcagacaggatcagaagaacttagatcattatataatacagtagcaaccctctattgtgtgcatcaaaggatagagataaaagacaccaaggaagctttagacaagtcaattaggaccggacaatctttgtagtcttccgacatctgtttatgaccctgtcgatgttggtagggaagtctgtcctagtcttcttgaatctagtaatatattatgtcatcgttgggagataacacacgtagtttcctatctctattttctgtggttccttcgaaatctgtt720740760780800820840860
    gatagaggaagagcaaaacaaaagtaagaccaccgcacagcaagcggccgctgatcttcagacctggaggaggagatatgagggacaattggagaagtgaattatataaatataaagtagtaaaaattgaaccattaggagtagcacccaccaaggcaaagagaagagtggtgcactatctccttctcgttttgttttcattctggtggcgtgtcgttcgccggcgactagaagtctggacctcctcctctatactccctgttaacctcttcacttaatatatttatatttcatcatttttaacttggtaatcctcatcgtgggtggttccgtttctcttctcaccacgtMfeINotI8809009209409609801,0001,0201,040
    gagagaaaaaagagcagtgggaataggagctttgttccttgggttcttgggagcagcaggaagcactatgggcgcagcgtcaatgacgctgacggtacaggccagacaattattgtctggtatagtgcagcagcagaacaatttgctgagggctattgaggcgcaacagcatctgctctcttttttctcgtcacccttatcctcgaaacaaggaacccaagaaccctcgtcgtccttcgtgatacccgcgtcgcagttactgcgactgccatgtccggtctgttaataacagaccatatcacgtcgtcgtcttgttaaacgactcccgataactccgcgttgtcgtagacBbvCIBpu10IRRE1,0601,0801,1001,1201,1401,1601,1801,2001,220
    ttgcaactcacagtctggggcatcaagcagctccaggcaagaatcctggctgtggaaagatacctaaaggatcaacagctcctggggatttggggttgctctggaaaactcatttgcaccactgctgtgccttggaatgctagttggagtaataaatctctggaacagattggaaaacgttgagtgtcagaccccgtagttcgtcgaggtccgttcttaggaccgacacctttctatggatttcctagttgtcgaggacccctaaaccccaacgagaccttttgagtaaacgtggtgacgacacggaaccttacgatcaacctcattatttagagaccttgtctaaccttBsmIBsaBIRRE1,2401,2601,2801,3001,3201,3401,3601,3801,400
    tcacacgacctggatggagtgggacagagaaattaacaattacacaagcttaatacactccttaattgaagaatcgcaaaaccagcaagaaaagaatgaacaagaattattggaattagataaatgggcaagtttgtggaattggtttaacataacaaattggctgtggtatataagtgtgctggacctacctcaccctgtctctttaattgttaatgtgttcgaattatgtgaggaattaacttcttagcgttttggtcgttcttttcttacttgttcttaataaccttaatctatttacccgttcaaacaccttaaccaaattgtattgtttaaccgacaccatatat1,4201,4401,4601,4801,5001,5201,5401,560
    aaattattcataatgatagtaggaggcttggtaggtttaagaatagtttttgctgtactttctatagtgaatagagttaggcagggatattcaccattatcgtttcagacccacctcccaaccccgaggggacccgacaggcccgaaggaatagaagaagaaggtggagagagagtttaataagtattactatcatcctccgaaccatccaaattcttatcaaaaacgacatgaaagatatcacttatctcaatccgtccctataagtggtaatagcaaagtctgggtggagggttggggctcccctgggctgtccgggcttccttatcttcttcttccacctctctctcKflIPpuMI1,5801,6001,6201,6401,6601,6801,7001,7201,740
    acagagacagatccattcgattagtgaacggatctcgacggtatcggttaacttttaaaagaaaaggggggattggggggtacagtgcaggggaaagaatagtagacataatagcaacagacatacaaactaaagaattacaaaaacaaattacaaaaattcaaaattttatcgatgtctctgtctaggtaagctaatcacttgcctagagctgccatagccaattgaaaattttcttttcccccctaaccccccatgtcacgtcccctttcttatcatctgtattatcgttgtctgtatgtttgatttcttaatgtttttgtttaatgtttttaagttttaaaatagctClaIHpaIBspDIcPPT1,7601,7801,8001,8201,8401,8601,8801,9001,920
    taagcttgggagttccgcgttacataacttacggtaaatggcccgcctggctgaccgcccaacgacccccgcccattgacgtcaataatgacgtatgttcccatagtaacgccaatagggactttccattgacgtcaatgggtggagtatttacggtaaactgcccacttggcagattcgaaccctcaaggcgcaatgtattgaatgccatttaccgggcggaccgactggcgggttgctgggggcgggtaactgcagttattactgcatacaagggtatcattgcggttatccctgaaaggtaactgcagttacccacctcataaatgccatttgacgggtgaaccgtcPcmv1,9401,9601,9802,0002,0202,0402,0602,0802,100
    tacatcaagtgtatcatatgccaagtacgccccctattgacgtcaatgacggtaaatggcccgcctggcattatgcccagtacatgaccttatgggactttcctacttggcagtacatctacgtattagtcatcgctattaccatggtgatgcggttttggcagtacatcaatggatgtagttcacatagtatacggttcatgcgggggataactgcagttactgccatttaccgggcggaccgtaatacgggtcatgtactggaataccctgaaaggatgaaccgtcatgtagatgcataatcagtagcgataatggtaccactacgccaaaaccgtcatgtagttaccNdeISnaBIPcmv2,1202,1402,1602,1802,2002,2202,2402,260
    gcgtggatagcggtttgactcacggggatttccaagtctccaccccattgacgtcaatgggagtttgttttggcaccaaaatcaacgggactttccaaaatgtcgtaacaactccgccccattgacgcaaatgggcggtaggcgtgtacggtgggaggtctatataagcagagctcgcacctatcgccaaactgagtgcccctaaaggttcagaggtggggtaactgcagttaccctcaaacaaaaccgtggttttagttgccctgaaaggttttacagcattgttgaggcggggtaactgcgtttacccgccatccgcacatgccaccctccagatatattcgtctcgaPcmv2,2802,3002,3202,3402,3602,3802,4002,4202,440
    cgtttagtgaaccgtcagatcgcctggagacgccatccacgctgttttgacctccatagaagacaccgactctagaggatccactagtggatcctctagagtcgactccggaataacttcgtataggatactttatacgaagttatgcagaatggtagctggattgtagctgctagcaaatcacttggcagtctagcggacctctgcggtaggtgcgacaaaactggaggtatcttctgtggctgagatctcctaggtgatcacctaggagatctcagctgaggccttattgaagcatatcctatgaaatatgcttcaatacgtcttaccatcgacctaacatcgacgatSalISpeIBsmBIBspEIEsp3IPcmvLox27222,4602,4802,5002,5202,5402,5602,5802,6002,620
    ttagcaatatgaaacctcttaataacttcgtatagcatacattatacgaagttatggcgcgccttacttgtacagctcgtccatgccgccggtggagtggcggccctcggcgcgttcgtactgttccacgatggtgtagtcctcgttgtgggaggtgatgtccaacttgatgttgaatcgttatactttggagaattattgaagcatatcgtatgtaatatgcttcaataccgcgcggaatgaacatgtcgagcaggtacggcggccacctcaccgccgggagccgcgcaagcatgacaaggtgctaccacatcaggagcaacaccctccactacaggttgaactacaacAscIXcmIBsrGISgrAImCherryLoxP2,6402,6602,6802,7002,7202,7402,7602,7802,800
    acgttgtaggcgccgggcagctgcacgggcttcttggccttgtaggtggtcttgacctcagcgtcgtagtggccgccgtccttcagcttcagcctctgcttgatctcgcccttcagggcgccgtcctcggggtacatccgctcggaggaggcctcccagcccatggtcttcttcttgcaacatccgcggcccgtcgacgtgcccgaagaaccggaacatccaccagaactggagtcgcagcatcaccggcggcaggaagtcgaagtcggagacgaactagagcgggaagtcccgcggcaggagccccatgtaggcgagcctcctccggagggtcgggtaccagaagaagaBbvCIBpu10ImCherry2,8202,8402,8602,8802,9002,9202,9402,960
    gcattacggggccgtcggaggggaagttggtgccgcgcagcttcaccttgtagatgaactcgccgtcctgcagggaggagtcctgggtcacggtcaccacgccgccgtcctcgaagttcatcacgcgctcccacttgaagccctcggggaaggacagcttcaagtagtcggggatcgtaatgccccggcagcctccccttcaaccacggcgcgtcgaagtggaacatctacttgagcggcaggacgtccctcctcaggacccagtgccagtggtgcggcggcaggagcttcaagtagtgcgcgagggtgaacttcgggagccccttcctgtcgaagttcatcagcccctaSbfImCherry2,9803,0003,0203,0403,0603,0803,1003,1203,140
    gtcggcggggtgcttcacgtaggccttggagccgtacatgaactgaggggacaggatgtcccaggcgaagggcagggggccacccttggtcaccttcagcttggcggtctgggtgccctcgtaggggcggccctcgccctcgccctcgatctcgaactcgtggccgttcacggagcagccgccccacgaagtgcatccggaacctcggcatgtacttgactcccctgtcctacagggtccgcttcccgtcccccggtgggaaccagtggaagtcgaaccgccagacccacgggagcatccccgccgggagcgggagcgggagctagagcttgagcaccggcaagtgcctcmCherry3,1603,1803,2003,2203,2403,2603,2803,3003,320
    ccctccatgtgcaccttgaagcgcatgaactccttgatgatggccatgttatcctcctcgcccttgctcaccatggtggcgaccgggggatccttcaaggcctgctcgggtgcgcgcttgtgaaaaatgaccgactgtctctgctggtactgctgcttgcgcctcttttttttgtgggaggtacacgtggaacttcgcgtacttgaggaactactaccggtacaataggaggagcgggaacgagtggtaccaccgctggccccctaggaagttccggacgagcccacgcgcgaacactttttactggctgacagagacgaccatgacgacgaacgcggagaaaaaaaacahM3DmCherry3,3403,3603,3803,4003,4203,4403,4603,4803,500
    cacactggcacagcagcagcatcttgaaagtggttctgaatgttttgttgcacagagcatagcacacggggttcacggtgctgttgatgtagcacagccagtagcccagattccaaaaggttttgggtatgcagctgtcacaaaaggtgttcaccagaaccatgatgttgtatgggtgtgaccgtgtcgtcgtcgtagaactttcaccaagacttacaaaacaacgtgtctcgtatcgtgtgccccaagtgccacgacaactacatcgtgtcggtcatcgggtctaaggttttccaaaacccatacgtcgacagtgttttccacaagtggtcttggtactacaacatacchM3D3,5203,5403,5603,5803,6003,6203,6403,660
    ggtccaagtgatgatgaaggcaagcaagatcgcactgagggtctgggccgctttcttctccttgaccagggacatccttttccgcttagtgatctgacttctggtcttcagagcaaacctcttggccagagtggcttccttgaaggacagaggtagagtggccgtgctcttacccccaggttcactactacttccgttcgttctagcgtgactcccagacccggcgaaagaagaggaactggtccctgtaggaaaaggcgaatcactagactgaagaccagaagtctcgtttggagaaccggtctcaccgaaggaacttcctgtctccatctcaccggcacgagaatggghM3D3,6803,7003,7203,7403,7603,7803,8003,8203,840
    actgaggagttgacgtcagaagtcttagctgtgtccacggctgactctagctggatgggaagcttggagaagctttttggaaaactgcctccatcgtccacgctcttctgggcctgcagcttgtcggctttcctctccaagtccaccatccccagctcctcctcaggcacctgcatgactcctcaactgcagtcttcagaatcgacacaggtgccgactgagatcgacctacccttcgaacctcttcgaaaaaccttttgacggaggtagcaggtgcgagaagacccggacgtcgaacagccgaaaggagaggttcaggtggtaggggtcgaggaggagtccgtggacgtBfuAIBspMIBsu36IhM3D3,8603,8803,9003,9203,9403,9603,9804,0004,020
    ggttgtccgatgagggtaacttggtggagttgaggatggtgctgtgacccggaagcttgagcacgatggagtagatggctctcgtctcggagccaatgtcctcctcgtcggaggaggcggagttctccagggaggcagcagcatcattgttgttccaactgtcactgctgctgtgccaacaggctactcccattgaaccacctcaactcctaccacgacactgggccttcgaactcgtgctacctcatctaccgagagcagagcctcggttacaggaggagcagcctcctccgcctcaagaggtccctccgtcgtcgtagtaacaacaaggttgacagtgacgacgacacSbfIBfuAIBsmBIBspMIEsp3IPaqCIhM3D4,0404,0604,0804,1004,1204,1404,1604,1804,200
    gtcttggtccatctgctcggagctgggtttccagctcttggttgtgaaccagaagtggcagcggccatacttcctcctgttggagcgtttcatgctttgctgttgaagttcgtaactgctgcagcttcgagaactgcccgtggggtggacaaagttttctgtctctgcctctgtccagaaccaggtagacgagcctcgacccaaaggtcgagaaccaacacttggtcttcaccgtcgccggtatgaaggaggacaacctcgcaaagtacgaaacgacaacttcaagcattgacgacgtcgaagctcttgacgggcaccccacctgtttcaaaagacagagacggagacaghM3D4,2204,2404,2604,2804,3004,3204,3404,360
    ccagaggcttgcaggccagcaagctctttggtacgcttttcagtttccttatagatcctccagtataaaatagtcataatggtgacaggcatataaaaaccagcgatggctgtgccaaaagtaatggtgggctcactgaggaactgaatgaagcactctcccggaggcacagttcggtctccgaacgtccggtcgttcgagaaaccatgcgaaaagtcaaaggaatatctaggaggtcatattttatcagtattaccactgtccgtatatttttggtcgctaccgacacggttttcattaccacccgagtgactccttgacttacttcgtgagagggcctccgtgtcaagBcgIhM3D4,3804,4004,4204,4404,4604,4804,5004,5204,540
    tctttccaacaaagtattgccagaacaagatggcaggagcccaaaggacaaaggagatgacccaagccagaccgatcatcacaccggctctctttgttgttcgtttggctcggtacgtgagcggcctcgtgatggaaaagtatctgtcaaagctgatgaccagaagattcataacagaaaggttgtttcataacggtcttgttctaccgtcctcgggtttcctgtttcctctactgggttcggtctggctagtagtgtggccgagagaaacaacaagcaaaccgagccatgcactcgccggagcactaccttttcatagacagtttcgactactggtcttctaagtattghM3D4,5604,5804,6004,6204,6404,6604,6804,7004,720
    agaggcattgctggctacgcagtcaatggcaagccagaggtcacaggccaagttccctaaggcccatcgattcatgatgatgtaggtcgtaaacagattcattgaaatgaccccgataatcagatcggcacaggccaggcttaagaggaagtagttgttgaccgtcttcagctgctctccgtaacgaccgatgcgtcagttaccgttcggtctccagtgtccggttcaagggattccgggtagctaagtactactacatccagcatttgtctaagtaactttactggggctattagtctagccgtgtccggtccgaattctccttcatcaacaactggcagaagtcgacgClaIBspDIBsu36IhM3D4,7404,7604,7804,8004,8204,8404,8604,8804,900
    ttgttgaccttaaatgacacaattaccaggatgttgccgatgatggtcaccaaggccaggatgcccgttaagaaagcgatgaagaccacttgccagacggtatgacctcccagagggtcatcggtggtaccgtctggagaggagaaattgccagctgctcgagaaacattgtagcaacaactggaatttactgtgttaatggtcctacaacggctactaccagtggttccggtcctacgggcaattctttcgctacttctggtgaacggtctgccatactggagggtctcccagtagccaccatggcagacctctcctctttaacggtcgacgagctctttgtaacatcgTliIXhoIPaeR7IhM3D4,9204,9404,9604,9805,0005,0205,0405,060
    tgccgaaatgagtgacggttcccgggggcagccctgcatcggaggggctgtgtatccaggaggagctgatgtttggaaacaaaggcgaggttgtactgttattgtgcaaggtcatggtggcgctagcataacttcgtataaagtatcctatacgaagttatttgccttaacccagacggctttactcactgccaagggcccccgtcgggacgtagcctccccgacacataggtcctcctcgactacaaacctttgtttccgctccaacatgacaataacacgttccagtaccaccgcgatcgtattgaagcatatttcataggatatgcttcaataaacggaattgggtcBmtINheISmaIXmaITspMIhM3DLox27225,0805,1005,1205,1405,1605,1805,2005,2205,240
    aaattatcactgttattctttagaatggtgcaaagaataacttcgtataatgtatgctatacgaagttatgaattcgatatcaagcttatcgactagtggatccgagctcggtaccaagcttaagtttaaaccgctgatcagcctcgactgtgccttctaaagggccaattctgctttaatagtgacaataagaaatcttaccacgtttcttattgaagcatattacatacgatatgcttcaatacttaagctatagttcgaatagctgatcacctaggctcgagccatggttcgaattcaaatttggcgactagtcggagctgacacggaagatttcccggttaagacgBclIPmeISpeIEcoRIEcoRVLoxP5,2605,2805,3005,3205,3405,3605,3805,4005,420
    agatatccagcacagtggcggccgctcgagtctagagggcccgcggttcgaaggtaagcctatccctaaccctctcctcggtctcgattctacgcgtaccggttagtaatgatcgacaatcaacctctggattacaaaatttgtgaaagattgactggtattcttaactatgttgtctataggtcgtgtcaccgccggcgagctcagatctcccgggcgccaagcttccattcggatagggattgggagaggagccagagctaagatgcgcatggccaatcattactagctgttagttggagacctaatgttttaaacactttctaactgaccataagaattgatacaacAgeIApaIMluINotITliIXhoIBstBIBstXIEcoRVPspXISacIIPaeR7IPspOMIWPREV5 epitope5,4405,4605,4805,5005,5205,5405,5605,5805,600
    ctccttttacgctatgtggatacgctgctttaatgcctttgtatcatgctattgcttcccgtatggctttcattttctcctccttgtataaatcctggttgctgtctctttatgaggagttgtggcccgttgtcaggcaacgtggcgtggtgtgcactgtgtttgctgacgcaacgaggaaaatgcgatacacctatgcgacgaaattacggaaacatagtacgataacgaagggcataccgaaagtaaaagaggaggaacatatttaggaccaacgacagagaaatactcctcaacaccgggcaacagtccgttgcaccgcaccacacgtgacacaaacgactgcgttgWPRE5,6205,6405,6605,6805,7005,7205,7405,760
    ccccactggttggggcattgccaccacctgtcagctcctttccgggactttcgctttccccctccctattgccacggcggaactcatcgccgcctgccttgcccgctgctggacaggggctcggctgttgggcactgacaattccgtggtgttgtcggggaagctgacgtcctttggggtgaccaaccccgtaacggtggtggacagtcgaggaaaggccctgaaagcgaaagggggagggataacggtgccgccttgagtagcggcggacggaacgggcgacgacctgtccccgagccgacaacccgtgactgttaaggcaccacaacagccccttcgactgcaggaaaWPRE5,7805,8005,8205,8405,8605,8805,9005,9205,940
    ccatggctgctcgcctgtgttgccacctggattctgcgcgggacgtccttctgctacgtcccttcggccctcaatccagcggaccttccttcccgcggcctgctgccggctctgcggcctcttccgcgtcttcgccttcgccctcagacgagtcggatctccctttgggccgcctggtaccgacgagcggacacaacggtggacctaagacgcgccctgcaggaagacgatgcagggaagccgggagttaggtcgcctggaaggaagggcgccggacgacggccgagacgccggagaaggcgcagaagcggaagcgggagtctgctcagcctagagggaaacccggcggaNaeISacIINgoMIVWPRE5,9605,9806,0006,0206,0406,0606,0806,1006,120
    ccccgcctggcgatggtaccggtgtggaaagtccccaggctccccagcaggcagaagtatgcaaagcatgcatctcaattagtcagcaaccaggtgtggaaagtccccaggctccccagcaggcagaagtatgcaaagcatgcatctcaattagtcagcaaccatagtcccgcccggggcggaccgctaccatggccacacctttcaggggtccgaggggtcgtccgtcttcatacgtttcgtacgtagagttaatcagtcgttggtccacacctttcaggggtccgaggggtcgtccgtcttcatacgtttcgtacgtagagttaatcagtcgttggtatcagggcgggAgeIBaeINsiINsiISexAISV40 promoterWPRE6,1406,1606,1806,2006,2206,2406,2606,2806,300
    ctaactccgcccatcccgcccctaactccgcccagttccgcccattctccgccccatggctgactaattttttttatttatgcagaggccgaggccgcctctgcctctgagctattccagaagtagtgaggaggcttttttggaggcctaggcttttgcaaaaagctcccgggaggattgaggcgggtagggcggggattgaggcgggtcaaggcgggtaagaggcggggtaccgactgattaaaaaaaataaatacgtctccggctccggcggagacggagactcgataaggtcttcatcactcctccgaaaaaacctccggatccgaaaacgtttttcgagggccctcSmaIXmaIAvrIITspMISV40 promoter6,3206,3406,3606,3806,4006,4206,4406,460
    cttgtatatccattttcggatctgatcagcacgtgttgacaattaatcatcggcatagtatatcggcatagtataatacgacaaggtgaggaactaaaccatggccaagcctttgtctcaagaagaatccaccctcattgaaagagcaacggctacaatcaacagcatccccatcgaacatataggtaaaagcctagactagtcgtgcacaactgttaattagtagccgtatcatatagccgtatcatattatgctgttccactccttgatttggtaccggttcggaaacagagttcttcttaggtgggagtaactttctcgttgccgatgttagttgtcgtaggggtagBclIPmlIBlasticidinEM76,4806,5006,5206,5406,5606,5806,6006,6206,640
    tctgaagactacagcgtcgccagcgcagctctctctagcgacggccgcatcttcactggtgtcaatgtatatcattttactgggggaccttgtgcagaactcgtggtgctgggcactgctgctgctgcggcagctggcaacctgacttgtatcgtcgcgatcggaaatgagaacaagacttctgatgtcgcagcggtcgcgtcgagagagatcgctgccggcgtagaagtgaccacagttacatatagtaaaatgaccccctggaacacgtcttgagcaccacgacccgtgacgacgacgacgccgtcgaccgttggactgaacatagcagcgctagcctttactcttgtNruIPpuMIBlasticidin6,6606,6806,7006,7206,7406,7606,7806,8006,820
    ggggcatcttgagcccctgcggacggtgccgacaggtgcttctcgatctgcatcctgggatcaaagccatagtgaaggacagtgatggacagccgacggcagttgggattcgtgaattgctgccctctggttatgtgtgggagggctaagcacaattcgagctcggtacctttaaccccgtagaactcggggacgcctgccacggctgtccacgaagagctagacgtaggaccctagtttcggtatcacttcctgtcactacctgtcggctgccgtcaaccctaagcacttaacgacgggagaccaatacacaccctcccgattcgtgttaagctcgagccatggaaattBlpIBsaBIBlasticidin6,8406,8606,8806,9006,9206,9406,9606,9807,000
    gaccaatgacttacaaggcagctgtagatcttaaccactttttaaaagaaaaggggggactggaagggctaattcactcccaacgaagacaagatctgctttttgcttgtactgggtctctctggttagaccagatctgagcctgggagctctctggctaactagggaacccactctggttactgaatgttccgtcgacatctagaattggtgaaaaattttcttttcccccctgaccttcccgattaagtgagggttgcttctgttctagacgaaaaacgaacatgacccagagagaccaatctggtctagactcggaccctcgagagaccgattgatcccttgggtgadeltaU3/3'LTR3' LTRdelta U37,0207,0407,0607,0807,1007,1207,1407,160
    gcttaagcctcaataaagcttgccttgagtgcttcaagtagtgtgtgcccgtctgttgtgtgactctggtaactagagatccctcagacccttttagtcagtgtggaaaatctctagcagtagtagttcatgtcatcttattattcagtatttataacttgcaaagaaatgaatacgaattcggagttatttcgaacggaactcacgaagttcatcacacacgggcagacaacacactgagaccattgatctctagggagtctgggaaaatcagtcacaccttttagagatcgtcatcatcaagtacagtagaataataagtcataaatattgaacgtttctttacttatdeltaU3/3'LTR3' LTR7,1807,2007,2207,2407,2607,2807,3007,3207,340
    tcagagagtgagaggaacttgtttattgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcatttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtctggctctagctatcccgcccctaactccgccagtctctcactctccttgaacaaataacgtcgaatattaccaatgtttatttcgttatcgtagtgtttaaagtgtttatttcgtaaaaaaagtgacgtaagatcaacaccaaacaggtttgagtagttacatagaatagtacagaccgagatcgatagggcggggattgaggcggBsmISV40 pA7,3607,3807,4007,4207,4407,4607,4807,5007,520
    catcccgcccctaactccgcccagttccgcccattctccgccccatggctgactaattttttttatttatgcagaggccgaggccgcctcggcctctgagctattccagaagtagtgaggaggcttttttggaggcctagggacgtacccaattcgccctatagtgagtcgtattgtagggcggggattgaggcgggtcaaggcgggtaagaggcggggtaccgactgattaaaaaaaataaatacgtctccggctccggcggagccggagactcgataaggtcttcatcactcctccgaaaaaacctccggatccctgcatgggttaagcgggatatcactcagcataaSfiIAvrII7,5407,5607,5807,6007,6207,6407,6607,6807,700
    acgcgcgctcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatgggacgcgcctgcgcgcgagtgaccggcagcaaaatgttgcagcactgacccttttgggaccgcaatgggttgaattagcggaacgtcgtgtagggggaaagcggtcgaccgcattatcgcttctccgggcgtggctagcgggaagggttgtcaacgcgtcggacttaccgcttaccctgcgcggFspI7,7207,7407,7607,7807,8007,8207,8407,860
    ctgtagcggcgcattaagcgcggcgggtgtggtggttacgcgcagcgtgaccgctacacttgccagcgccctagcgcccgctcctttcgctttcttcccttcctttctcgccacgttcgccggctttccccgtcaagctctaaatcgggggctccctttagggttccgatttagtgacatcgccgcgtaattcgcgccgcccacaccaccaatgcgcgtcgcactggcgatgtgaacggtcgcgggatcgcgggcgaggaaagcgaaagaagggaaggaaagagcggtgcaagcggccgaaaggggcagttcgagatttagcccccgagggaaatcccaaggctaaatcaNaeINgoMIV7,8807,9007,9207,9407,9607,9808,0008,0208,040
    gctttacggcacctcgaccccaaaaaacttgattagggtgatggttcacgtagtgggccatcgccctgatagacggtttttcgccctttgacgttggagtccacgttctttaatagtggactcttgttccaaactggaacaacactcaaccctatctcggtctattcttttgattcgaaatgccgtggagctggggttttttgaactaatcccactaccaagtgcatcacccggtagcgggactatctgccaaaaagcgggaaactgcaacctcaggtgcaagaaattatcacctgagaacaaggtttgaccttgttgtgagttgggatagagccagataagaaaactaaDraIII8,0608,0808,1008,1208,1408,1608,1808,2008,220
    tataagggattttgccgatttcggcctattggttaaaaaatgagctgatttaacaaaaatttaacgcgaattttaacaaaatattaacgcttacaatttaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatatgtatccgatattccctaaaacggctaaagccggataaccaattttttactcgactaaattgtttttaaattgcgcttaaaattgttttataattgcgaatgttaaatccaccgtgaaaagcccctttacacgcgccttggggataaacaaataaaaagatttatgtaagtttatacataggcSspIbla (amp) promoter8,2408,2608,2808,3008,3208,3408,3608,3808,400
    ctcatgagacaataaccctgataaatgcttcaataatattgaaaaaggaagagtatgagtattcaacatttccgtgtcgcccttattcccttttttgcggcattttgccttcctgtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgcacgagtactctgttattgggactatttacgaagttattataactttttccttctcatactcataagttgtaaaggcacagcgggaataagggaaaaaacgccgtaaaacggaaggacaaaaacgagtgggtctttgcgaccactttcattttctacgacttctagtcaacccacgtgSspIAmpicillinbla (amp) promoter8,4208,4408,4608,4808,5008,5208,5408,560
    gagtgggttacatcgaactggatctcaacagcggtaagatccttgagagttttcgccccgaagaacgttttccaatgatgagcacttttaaagttctgctatgtggcgcggtattatcccgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgactcacccaatgtagcttgacctagagttgtcgccattctaggaactctcaaaagcggggcttcttgcaaaaggttactactcgtgaaaatttcaagacgatacaccgcgccataatagggcataactgcggcccgttctcgttgagccagcggcgtatgtgataagagtcttactAclIBcgIAmpicillin8,5808,6008,6208,6408,6608,6808,7008,7208,740
    cttggttgagtactcaccagtcacagaaaagcatcttacggatggcatgacagtaagagaattatgcagtgctgccataaccatgagtgataacactgcggccaacttacttctgacaacgatcggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtagaaccaactcatgagtggtcagtgtcttttcgtagaatgcctaccgtactgtcattctcttaatacgtcacgacggtattggtactcactattgtgacgccggttgaatgaagactgttgctagcctcctggcttcctcgattggcgaaaaaacgtgttgtaccccctagtacatScaIAmpicillin8,7608,7808,8008,8208,8408,8608,8808,9008,920
    actcgccttgatcgttgggaaccggagctgaatgaagccataccaaacgacgagcgtgacaccacgatgcctgtagcaatggcaacaacgttgcgcaaactattaactggcgaactacttactctagcttcccggcaacaattaatagactggatggaggcggataaagttgcagtgagcggaactagcaacccttggcctcgacttacttcggtatggtttgctgctcgcactgtggtgctacggacatcgttaccgttgttgcaacgcgtttgataattgaccgcttgatgaatgagatcgaagggccgttgttaattatctgacctacctccgcctatttcaacgtcAclIFspIAmpicillin8,9408,9608,9809,0009,0209,0409,0609,0809,100
    gaccacttctgcgctcggcccttccggctggctggtttattgctgataaatctggagccggtgagcgtgggtctcgcggtatcattgcagcactggggccagatggtaagccctcccgtatcgtagttatctacacgacggggagtcaggcaactatggatgaacgaaatagacactggtgaagacgcgagccgggaaggccgaccgaccaaataacgactatttagacctcggccactcgcacccagagcgccatagtaacgtcgtgaccccggtctaccattcgggagggcatagcatcaatagatgtgctgcccctcagtccgttgatacctacttgctttatctgtAmpicillin9,1209,1409,1609,1809,2009,2209,2409,260
    gatcgctgagataggtgcctcactgattaagcattggtaactgtcagaccaagtttactcatatatactttagattgatttaaaacttcatttttaatttaaaaggatctaggtgaagatcctttttgataatctcatgaccaaaatcccttaacgtgagttttcgttccactgactagcgactctatccacggagtgactaattcgtaaccattgacagtctggttcaaatgagtatatatgaaatctaactaaattttgaagtaaaaattaaattttcctagatccacttctaggaaaaactattagagtactggttttagggaattgcactcaaaagcaaggtgactAmpicillin9,2809,3009,3209,3409,3609,3809,4009,4209,440
    gcgtcagaccccgtagaaaagatcaaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaaaaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagataccaacgcagtctggggcatcttttctagtttcctagaagaactctaggaaaaaaagacgcgcattagacgacgaacgtttgtttttttggtggcgatggtcgccaccaaacaaacggcctagttctcgatggttgagaaaaaggcttccattgaccgaagtcgtctcgcgtctatggttpUC ori9,4609,4809,5009,5209,5409,5609,5809,6009,620
    atactgttcttctagtgtagccgtagttaggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctgttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgggtatgacaagaagatcacatcggcatcaatccggtggtgaagttcttgagacatcgtggcggatgtatggagcgagacgattaggacaatggtcaccgacgacggtcaccgctattcagcacagaatggcccaacctgagttctgctatcaatggcctattccgcgtcgccagcccpUC ori9,6409,6609,6809,7009,7209,7409,7609,7809,800
    ctgaacggggggttcgtgcacacagcccagcttggagcgaacgacctacaccgaactgagatacctacagcgtgagctatgagaaagcgccacgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggagagcgcacgagggagcttccaggggacttgccccccaagcacgtgtgtcgggtcgaacctcgcttgctggatgtggcttgactctatggatgtcgcactcgatactctttcgcggtgcgaagggcttccctctttccgcctgtccataggccattcgccgtcccagccttgtcctctcgcgtgctccctcgaaggtcccpUC ori9,8209,8409,8609,8809,9009,9209,9409,960
    ggaaacgcctggtatctttatagtcctgtcgggtttcgccacctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctatggaaaaacgccagcaacgcggcctttttacggttcctggccttttgctggccttttgctcacatgttctttcctgcgttatcctttgcggaccatagaaatatcaggacagcccaaagcggtggagactgaactcgcagctaaaaacactacgagcagtccccccgcctcggatacctttttgcggtcgttgcgccggaaaaatgccaaggaccggaaaacgaccggaaaacgagtgtacaagaaaggacgcaataPciIpUC ori9,98010,00010,02010,04010,06010,08010,10010,12010,140
    cccctgattctgtggataaccgtattaccgcctttgagtgagctgataccgctcgccgcagccgaacgaccgagcgcagcgagtcagtgagcgaggaagcggaagagcgcccaatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctggcacgacaggttggggactaagacacctattggcataatggcggaaactcactcgactatggcgagcggcgtcggcttgctggctcgcgtcgctcagtcactcgctccttcgccttctcgcgggttatgcgtttggcggagaggggcgcgcaaccggctaagtaattacgtcgaccgtgctgtccaa10,16010,18010,20010,22010,24010,26010,28010,30010,320
    tcccgactggaaagcgggcagtgagcgcaacgcaattaatgtgagttagctcactcattaggcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgaccatgattacgccaagcgcgcaattagggctgacctttcgcccgtcactcgcgttgcgttaattacactcaatcgagtgagtaatccgtggggtccgaaatgtgaaatacgaaggccgagcatacaacacaccttaacactcgcctattgttaaagtgtgtcctttgtcgatactggtactaatgcggttcgcgcgttaa10,34010,36010,38010,40010,42010,44010,46010,48010,500
    aaccctcactaaagggaacaaaagctggagctgcaagcttttgggagtgatttcccttgttttcgacctcgacgttcgaa10,52010,540
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    10540 bp75008000850090009500100005001000150020002500Lox2722HIV-1 5' LTR

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    10540