Welcome to Benchling!

You're looking at a DNA Sequence. Here are some things you can do with it:

Create an alignment

  1. Create alignments with both DNA and AA sequences.
  2. Bulk-align multiple sequences at once.
  3. Powerful visualization tool to inspect alignments in detail.

Design a primer

Create a translation

Design a CRISPR guide

Assemble and transform a sequence

Create account

Sign up with GoogleI already have an account
Benchling is actively tested against the latest versions of Chrome, Firefox, Safari, and Edge. **It doesn't look like your current browser is supported** - for more information, [click here](/browsers).
Monospace normal
Monospace bold
Advanced Settings
  • 0 feature results
BBa_E0040
  • Sequence Map
    Editing disabled on read-only sequence.
    atgcgtaaaggagaagaacttttcactggagttgtcccaattcttgttgaattagatggtgatgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatgcaacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccatggccaatacgcatttcctcttcttgaaaagtgacctcaacagggttaagaacaacttaatctaccactacaattacccgtgtttaaaagacagtcacctctcccacttccactacgttgtatgccttttgaatgggaatttaaataaacgtgatgaccttttgatggacaaggtaccggttApoIApoIBpmIBsrIBsrIBtgIEaeIMnlIMscINcoIPhoIStyIBaeGIBsaJIBsmFISfaNITscAITscAITspRITspRIHaeIIIHpyCH4VHpyCH4VBsp1286IBtsIMutIBtsIMutID19T18S17L16T15F14T13I12C11C10V9S8F7K6G5K4F3K2N184-141Test annotationGFP protein20406080100120140160
    cacttgtcactactttcggttatggtgttcaatgctttgcgagatacccagatcatatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaactatatttttcaaagatgacgggaactacaagacacgtgctgaagtcaagtttgaaggtgagtgaacagtgatgaaagccaataccacaagttacgaaacgctctatgggtctagtatactttgtcgtactgaaaaagttctcacggtacgggcttccaatacatgtcctttcttgatataaaaagtttctactgcccttgatgttctgtgcacgacttcagttcaaacttccactBarIDpnIMboINdeIPmlIRsaITatIBfuCIBsaAIBsrGICviQIDpnIIAflIIISau3AITsp45IHpyCH4IVHpy188IIIGFP protein180200220240260280300320340
    tacccttgttaatagaatcgagttaaaaggtattgattttaaagaagatggaaacattcttggacacaaattggaatacaactataactcacacaatgtatacatcatggcagacaaacaaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcatgggaacaattatcttagctcaattttccataactaaaatttcttctacctttgtaagaacctgtgtttaaccttatgttgatattgagtgtgttacatatgtagtaccgtctgtttgttttcttaccttagtttcaattgaagttttaatctgtgttgtaacttctaccttcgAccIAcuIBaeIDraIHpaITaqITfiITfiIHinfIHinfITaqαIHincIIBstZ17IGFP protein360380400420440460480500520
    gttcaactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccagacaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagaccacatggtccttcttgagtttgtaacagctgctgggattacacatggcatggcaagttgatcgtctggtaatagttgttttatgaggttaaccgctaccgggacaggaaaatggtctgttggtaatggacaggtgtgttagacgggaaagctttctagggttgcttttctctctggtgtaccaggaagaactcaaacattgtcgacgaccctaatgtgtaccgtaccAluIAlwIBbvIBfaIBsaIDpnIDrdIMboIMfeIPhoISmlITaqITseIAlwNIApeKIAvaIIBcoDIBfuCIBpuEIBseYIBsmAIBstBIBstYIBtgZIDpnIIPvuIITaqαIFnu4HIHaeIIIMspA1ISau3AISau96ISau96IEcoP15IHpy188IIIL1S2T3K4Y5S6N7W8R9W10P11C12P13F14543-585My annotationGFP protein540560580600620640660680700
    atgaactatacaaataaTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTtaatacttgatatgtttattAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAattFokIBtsCIGFP protein720740
    • Linear Map
    • Relevant Items
    • Metadata
    • Description
    Editing disabled on read-only sequence.
    BBa_E0040 (754 bp)AccIAcuIAluIAlwIApoIApoIBaeIBarIBbvIBfaIBpmIBsaIBsrIBsrIBtgIDpnIDpnIDraIDrdIEaeIFokIHpaIMboIMboIMfeIMnlIMscINcoINdeIPhoIPhoIPmlIRsaISmlIStyITaqITaqITatITfiITfiITseIAlwNIApeKIAvaIIBaeGIBcoDIBfuCIBfuCIBpuEIBsaAIBsaJIBseYIBsmAIBsmFIBsrGIBstBIBstYIBtgZIBtsCICviQIDpnIIDpnIIHinfIHinfIPvuIISfaNITaqαITaqαITscAITscAITspRITspRIAflIIIFnu4HIHaeIIIHaeIIIHincIIMspA1ISau3AISau3AISau96ISau96ITsp45IBstZ17IEcoP15IHpyCH4VHpyCH4VBsp1286IBtsIMutIBtsIMutIHpyCH4IVHpy188IIIHpy188III10020030040050060070084-14154...5GFP proteinTe...nBBa_E0040 (754 bp)

    Welcome to Benchling!

    Sign in to view data.

    New digest

    Saved digests

    Enzyme AatII
    Enzyme lists
    Cut sites visible on maps
    Find enzyme
    Clear selected
    Name Cuts
    Selected Color
    Show enzymes that cut

    Primers

    Pairs

    Create primers
    Attach existing
    Detach all primers
    Primer Position Product size

    Version history

     Show full history
    Change User Timestamp

    Sequence Alignments

    Create new alignment
    Saved alignments

    Sequence Info

    Tags

    Name
    Parent version
    Folder
    Topology
    Start index
    Locked
    Created
    --
    Length
    --
    Export data
    Download
    Split Workspace
    Bases
    754